RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 GAGE2BQ13066 116 aa2.15□□□□□ -2.06
CHD9-202ENST00000398510 WDR83OSQ9Y284 106 aa2.15□□□□□ -2.06
CHD9-202ENST00000398510 A8MWP6 167 aa2.15□□□□□ -2.06
CHD9-202ENST00000398510 F8W735 103 aaPredicted RBP2.15□□□□□ -2.06
CHD9-202ENST00000398510 WT1P19544 449 aaPredicted RBP2.15□□□□□ -2.06
CHD9-202ENST00000398510 TRAV10A0A0B4J240 114 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 IGHV4-39P01824 125 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 LGALS9CQ6DKI2 356 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 CARD19Q96LW7 228 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 TNFRSF12AQ9NP84 129 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 PRO0255Q9UI72 69 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 TRAV13-1A0A0B4J241 112 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 F8VRH5 84 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 XCL1P47992 114 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 PRR25Q96S07 402 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 RTBDNQ9BSG5 229 aaPredicted RBP2.15□□□□□ -2.07
CHD9-202ENST00000398510 LIMD2Q9BT23 127 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 LYL1P12980 280 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 C5orf56Q8N8D9 126 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 FLVCR1-AS1Q8TAF5 88 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 A0A1B0GW54 56 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 ZNF329Q86UD4 541 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 ZNF295-AS1Q8N0V1 137 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 Q8N1Y9 231 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 SIGMAR1Q99720 223 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 ZNRD1Q9P1U0 126 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 MEX3AA1L020 520 aaKnown RBP2.15□□□□□ -2.07
CHD9-202ENST00000398510 G3V4G9 280 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 NDUFS5O43920 106 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 PROP1O75360 226 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 C9orf153Q5TBE3 101 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 GAGE2AQ6NT46 116 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 UPK3BQ9BT76 320 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 A0A087X0K7 114 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 TRBV30A0A0K0K1B3 111 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 SMIM27A0A1W2PRY6 76 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 DEFB131AP59861 70 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 FHL1Q13642 323 aa2.15□□□□□ -2.07
CHD9-202ENST00000398510 LINC00473A8K010 186 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 C9JAW5 83 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 TGFBR3LH3BV60 316 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 BUB3O43684 328 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 LHFPL1Q86WI0 220 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 PRORYQ9H606 182 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 HHLA3Q9XRX5 114 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 NDUFC2O95298 119 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 B3GALT5-AS1P59052 145 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 TFF3Q07654 80 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 FAM104BQ5XKR9 115 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 ADAMTSL5Q6ZMM2 481 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 PPDPFLQ8WWR9 84 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 GSN-AS1Q9NRJ2 163 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 CHD7Q9P2D1 2997 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 A0A1B0GV90 55 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 MED19A0JLT2 244 aaPredicted RBP2.14□□□□□ -2.07
CHD9-202ENST00000398510 SYS1-DBNDD2H3BUS1 97 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 CD300CQ08708 224 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 BRD3OSQ6XYD6 125 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 IGKV2-40A0A087WW87 121 aaPredicted RBP2.14□□□□□ -2.07
CHD9-202ENST00000398510 TRAV12-1A0A0B4J245 112 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 A0A0J9YXY3 114 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 IGKV2D-40P01614 121 aaPredicted RBP2.14□□□□□ -2.07
CHD9-202ENST00000398510 IGKV1-16P04430 117 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 ARMS2P0C7Q2 107 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 HIST1H4AP62805 103 aaKnown RBP2.14□□□□□ -2.07
CHD9-202ENST00000398510 LYZL1Q6UWQ5 148 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 C2orf66Q6UXQ4 117 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 C14orf178Q8N769 122 aaPredicted RBP2.14□□□□□ -2.07
CHD9-202ENST00000398510 NUP35Q8NFH5 326 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 PIFOQ8TCI5 191 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 C11orf52Q96A22 123 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 VSIG2Q96IQ7 327 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 DNAJC9-AS1A6NH13 148 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 RS1O15537 224 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 C1QL1O75973 258 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 C3orf79P0CE67 100 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 UBE2D2P62837 147 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 TIMM17AQ99595 171 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.14□□□□□ -2.07
CHD9-202ENST00000398510 NDUFA7O95182 113 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 LEAP2Q969E1 77 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 NOTCH2Q04721 2471 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 TRAV26-2A0A0B4J265 109 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 GYPEP15421 78 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 ATP1A1-AS1Q5TC04 95 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 RPP25LQ8N5L8 163 aaKnown RBP2.14□□□□□ -2.07
CHD9-202ENST00000398510 DEFB125Q8N687 156 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 XCL2Q9UBD3 114 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 TRANK1O15050 2925 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 E7EQL1 145 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 CTRLP40313 264 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 INSL4Q14641 139 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 ZNF664Q8N3J9 261 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 MLST8Q9BVC4 326 aa2.14□□□□□ -2.07
CHD9-202ENST00000398510 ATOX1O00244 68 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 GFI1BQ5VTD9 330 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 MIR17HGQ75NE6 70 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 COX7B2Q8TF08 81 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 DIRC1Q969H9 104 aa2.13□□□□□ -2.07
CHD9-202ENST00000398510 SCRT1Q9BWW7 348 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms