RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 USP17L23D6RBM5 183 aa9.18□□□□□ -0.94
NPHP4-202ENST00000378161 IGKV3-15P01624 115 aa9.18□□□□□ -0.94
NPHP4-202ENST00000378161 LINC00336Q6ZUF6 198 aa9.18□□□□□ -0.94
NPHP4-202ENST00000378161 IGKV1D-17A0A075B6S4 117 aa9.18□□□□□ -0.94
NPHP4-202ENST00000378161 SBSPONQ8IVN8 264 aa9.18□□□□□ -0.94
NPHP4-202ENST00000378161 SMIM2Q9BVW6 85 aa9.18□□□□□ -0.94
NPHP4-202ENST00000378161 WI2-2373I1.2A0A1W2PRP0 233 aa9.17□□□□□ -0.94
NPHP4-202ENST00000378161 ZNF503-AS2A6NEH8 195 aa9.17□□□□□ -0.94
NPHP4-202ENST00000378161 ECSCRQ19T08 205 aa9.17□□□□□ -0.94
NPHP4-202ENST00000378161 TMEM200BQ69YZ2 307 aa9.17□□□□□ -0.94
NPHP4-202ENST00000378161 WDR86Q86TI4 376 aa9.17□□□□□ -0.94
NPHP4-202ENST00000378161 CRIP3Q6Q6R5 217 aa9.17□□□□□ -0.94
NPHP4-202ENST00000378161 Q8N7P7 452 aa9.17□□□□□ -0.94
NPHP4-202ENST00000378161 TMEM14BQ9NUH8 114 aa9.17□□□□□ -0.94
NPHP4-202ENST00000378161 LINC01548A6NM66 108 aa9.17□□□□□ -0.94
NPHP4-202ENST00000378161 GATA1P15976 413 aaPredicted RBP9.17□□□□□ -0.94
NPHP4-202ENST00000378161 LYPD1Q8N2G4 141 aa9.17□□□□□ -0.94
NPHP4-202ENST00000378161 LTBP2Q14767 1821 aa9.17□□□□□ -0.94
NPHP4-202ENST00000378161 IGHV1-46P01743 117 aa9.17□□□□□ -0.94
NPHP4-202ENST00000378161 NOTCH2Q04721 2471 aa9.17□□□□□ -0.94
NPHP4-202ENST00000378161 KRTAP27-1Q3LI81 207 aa9.17□□□□□ -0.94
NPHP4-202ENST00000378161 PRR25Q96S07 402 aa9.17□□□□□ -0.94
NPHP4-202ENST00000378161 PRR14LQ5THK1 2151 aa9.16□□□□□ -0.94
NPHP4-202ENST00000378161 M0R1W7 72 aa9.16□□□□□ -0.94
NPHP4-202ENST00000378161 PRIMA1Q86XR5 153 aa9.16□□□□□ -0.94
NPHP4-202ENST00000378161 TMEM167AQ8TBQ9 72 aa9.16□□□□□ -0.94
NPHP4-202ENST00000378161 MED13LQ71F56 2210 aa9.16□□□□□ -0.94
NPHP4-202ENST00000378161 A0A0J9YY99 117 aa9.16□□□□□ -0.94
NPHP4-202ENST00000378161 P0C879 139 aa9.16□□□□□ -0.94
NPHP4-202ENST00000378161 C10orf55Q5SWW7 151 aa9.16□□□□□ -0.94
NPHP4-202ENST00000378161 DGAT2L7PQ6IED9 249 aa9.16□□□□□ -0.94
NPHP4-202ENST00000378161 C8orf49Q96NF6 230 aa9.16□□□□□ -0.94
NPHP4-202ENST00000378161 OVOL2Q9BRP0 275 aa9.16□□□□□ -0.94
NPHP4-202ENST00000378161 A0A096LNJ9 63 aa9.16□□□□□ -0.94
NPHP4-202ENST00000378161 IGLV2-14P01704 120 aa9.16□□□□□ -0.94
NPHP4-202ENST00000378161 DYNAPQ8N1N2 210 aa9.16□□□□□ -0.94
NPHP4-202ENST00000378161 TRBV30A0A0K0K1B3 111 aa9.15□□□□□ -0.94
NPHP4-202ENST00000378161 ERCC8Q13216 396 aa9.15□□□□□ -0.94
NPHP4-202ENST00000378161 DPM3Q9P2X0 92 aa9.15□□□□□ -0.94
NPHP4-202ENST00000378161 ATG2AQ2TAZ0 1938 aa9.15□□□□□ -0.94
NPHP4-202ENST00000378161 SUMO2P61956 95 aaKnown RBP9.15□□□□□ -0.94
NPHP4-202ENST00000378161 ZMAT4Q9H898 229 aa9.15□□□□□ -0.94
NPHP4-202ENST00000378161 DPH3P1Q9H4G8 78 aa9.15□□□□□ -0.95
NPHP4-202ENST00000378161 MOB4Q9Y3A3 225 aa9.15□□□□□ -0.95
NPHP4-202ENST00000378161 FREM1Q5H8C1 2179 aa9.15□□□□□ -0.95
NPHP4-202ENST00000378161 IGHG3P01860 377 aa9.15□□□□□ -0.95
NPHP4-202ENST00000378161 RNASE1P07998 156 aaKnown RBP9.15□□□□□ -0.95
NPHP4-202ENST00000378161 PVRIGQ6DKI7 326 aa9.15□□□□□ -0.95
NPHP4-202ENST00000378161 TMEM86BQ8N661 226 aa9.15□□□□□ -0.95
NPHP4-202ENST00000378161 ZNF625Q96I27 306 aaPredicted RBP9.15□□□□□ -0.95
NPHP4-202ENST00000378161 SLC50A1Q9BRV3 221 aa9.15□□□□□ -0.95
NPHP4-202ENST00000378161 FGF23Q9GZV9 251 aaPredicted RBP9.15□□□□□ -0.95
NPHP4-202ENST00000378161 CREBBPQ92793 2442 aa9.14□□□□□ -0.95
NPHP4-202ENST00000378161 IGKV2-40A0A087WW87 121 aaPredicted RBP9.14□□□□□ -0.95
NPHP4-202ENST00000378161 SRRM4A7MD48 611 aaKnown RBP9.14□□□□□ -0.95
NPHP4-202ENST00000378161 IGKV2D-40P01614 121 aaPredicted RBP9.14□□□□□ -0.95
NPHP4-202ENST00000378161 PSMB8P28062 276 aa9.14□□□□□ -0.95
NPHP4-202ENST00000378161 BSPH1Q075Z2 132 aa9.14□□□□□ -0.95
NPHP4-202ENST00000378161 TRBV7-1A0A0A6YYK4 115 aa9.14□□□□□ -0.95
NPHP4-202ENST00000378161 TRIAP1O43715 76 aa9.14□□□□□ -0.95
NPHP4-202ENST00000378161 CD59P13987 128 aa9.14□□□□□ -0.95
NPHP4-202ENST00000378161 VSIG2Q96IQ7 327 aa9.14□□□□□ -0.95
NPHP4-202ENST00000378161 C2orf16Q68DN1 1984 aa9.14□□□□□ -0.95
NPHP4-202ENST00000378161 UBL5Q9BZL1 73 aa9.13□□□□□ -0.95
NPHP4-202ENST00000378161 U3KQK5 164 aa9.13□□□□□ -0.95
NPHP4-202ENST00000378161 C15orf65H3BRN8 121 aa9.13□□□□□ -0.95
NPHP4-202ENST00000378161 H7C423 109 aa9.13□□□□□ -0.95
NPHP4-202ENST00000378161 MRPS36P82909 103 aaKnown RBP9.13□□□□□ -0.95
NPHP4-202ENST00000378161 ZCCHC24Q8N2G6 241 aaKnown RBP9.13□□□□□ -0.95
NPHP4-202ENST00000378161 FAM19A4Q96LR4 140 aa9.13□□□□□ -0.95
NPHP4-202ENST00000378161 FANCD2OSQ96PS1 177 aa9.13□□□□□ -0.95
NPHP4-202ENST00000378161 CGB1A6NKQ9 187 aa9.12□□□□□ -0.95
NPHP4-202ENST00000378161 IGKV1-16P04430 117 aa9.12□□□□□ -0.95
NPHP4-202ENST00000378161 UBE2E1P51965 193 aa9.12□□□□□ -0.95
NPHP4-202ENST00000378161 IL17DQ8TAD2 202 aa9.12□□□□□ -0.95
NPHP4-202ENST00000378161 TIMM21Q9BVV7 248 aa9.12□□□□□ -0.95
NPHP4-202ENST00000378161 TRAV26-2A0A0B4J265 109 aa9.12□□□□□ -0.95
NPHP4-202ENST00000378161 TMEM89A2RUT3 159 aa9.12□□□□□ -0.95
NPHP4-202ENST00000378161 Q8TAT8 98 aa9.12□□□□□ -0.95
NPHP4-202ENST00000378161 C1orf159Q96HA4 380 aa9.12□□□□□ -0.95
NPHP4-202ENST00000378161 TMEM141Q96I45 108 aa9.12□□□□□ -0.95
NPHP4-202ENST00000378161 TP53TG1Q9Y2A0 90 aa9.12□□□□□ -0.95
NPHP4-202ENST00000378161 IGHV3-30P01768 117 aa9.12□□□□□ -0.95
NPHP4-202ENST00000378161 IGHV3-30-5P0DP03 117 aa9.12□□□□□ -0.95
NPHP4-202ENST00000378161 GAFA1Q96PS6 74 aa9.11□□□□□ -0.95
NPHP4-202ENST00000378161 UNC80Q8N2C7 3258 aa9.11□□□□□ -0.95
NPHP4-202ENST00000378161 TRAV23DV6A0A075B6W5 121 aa9.11□□□□□ -0.95
NPHP4-202ENST00000378161 IGKV1OR2-108A0A075B7D4 117 aa9.11□□□□□ -0.95
NPHP4-202ENST00000378161 CACNA1AO00555 2505 aa9.11□□□□□ -0.95
NPHP4-202ENST00000378161 IGHV3-35A0A0C4DH35 117 aa9.1□□□□□ -0.95
NPHP4-202ENST00000378161 MSRB1Q9NZV6 116 aa9.1□□□□□ -0.95
NPHP4-202ENST00000378161 NACAE9PAV3 2078 aa9.1□□□□□ -0.95
NPHP4-202ENST00000378161 IGKV3-7A0A075B6H7 116 aa9.1□□□□□ -0.95
NPHP4-202ENST00000378161 SPRY2O43597 315 aa9.1□□□□□ -0.95
NPHP4-202ENST00000378161 ELANEP08246 267 aa9.1□□□□□ -0.95
NPHP4-202ENST00000378161 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.1□□□□□ -0.95
NPHP4-202ENST00000378161 PATE2Q6UY27 113 aa9.1□□□□□ -0.95
NPHP4-202ENST00000378161 S4R3C0 116 aa9.1□□□□□ -0.95
NPHP4-202ENST00000378161 NBR2O15453 112 aa9.1□□□□□ -0.95
NPHP4-202ENST00000378161 DAZ2Q13117 558 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms