RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 IGHV3-15A0A0B4J1V0 119 aa5.91□□□□□ -1.46
USP48-203ENST00000374732 LINC01549A6NIU2 74 aa5.91□□□□□ -1.46
USP48-203ENST00000374732 DYNLT3P51808 116 aa5.91□□□□□ -1.46
USP48-203ENST00000374732 KRTAP21-3Q3LHN1 58 aa5.91□□□□□ -1.46
USP48-203ENST00000374732 IL36RNQ9UBH0 155 aa5.91□□□□□ -1.46
USP48-203ENST00000374732 CACNA1CQ13936 2221 aa5.91□□□□□ -1.46
USP48-203ENST00000374732 A0A0G2JRQ6 117 aa5.91□□□□□ -1.46
USP48-203ENST00000374732 URB1-AS1Q96HZ7 61 aa5.91□□□□□ -1.46
USP48-203ENST00000374732 HIST1H4GQ99525 98 aa5.91□□□□□ -1.46
USP48-203ENST00000374732 RAI1Q7Z5J4 1906 aaPredicted RBP5.91□□□□□ -1.46
USP48-203ENST00000374732 IGKV1-5P01602 117 aa5.91□□□□□ -1.46
USP48-203ENST00000374732 PI3P19957 117 aa5.91□□□□□ -1.46
USP48-203ENST00000374732 ARHGAP5-AS1Q96IT6 56 aa5.91□□□□□ -1.46
USP48-203ENST00000374732 PCSK5Q92824 1860 aa5.9□□□□□ -1.46
USP48-203ENST00000374732 PEX7O00628 323 aa5.9□□□□□ -1.46
USP48-203ENST00000374732 SUPT4H1P63272 117 aaKnown RBP5.9□□□□□ -1.46
USP48-203ENST00000374732 DEFB124Q8NES8 71 aa5.9□□□□□ -1.46
USP48-203ENST00000374732 CHCHD1Q96BP2 118 aaKnown RBP5.9□□□□□ -1.46
USP48-203ENST00000374732 LAMA1P25391 3075 aa5.9□□□□□ -1.46
USP48-203ENST00000374732 UBE2BP63146 152 aa5.9□□□□□ -1.47
USP48-203ENST00000374732 RIGQ13278 110 aa5.9□□□□□ -1.47
USP48-203ENST00000374732 OPRPNQ99935 248 aaPredicted RBP5.9□□□□□ -1.47
USP48-203ENST00000374732 A0A0J9YXV3 536 aa5.89□□□□□ -1.47
USP48-203ENST00000374732 H7BZZ5 65 aa5.89□□□□□ -1.47
USP48-203ENST00000374732 J3QKU1 62 aa5.89□□□□□ -1.47
USP48-203ENST00000374732 PDPNQ86YL7 162 aa5.89□□□□□ -1.47
USP48-203ENST00000374732 ODF3L1Q8IXM7 274 aa5.89□□□□□ -1.47
USP48-203ENST00000374732 C20orf197Q8N268 126 aa5.89□□□□□ -1.47
USP48-203ENST00000374732 SLC25A2Q9BXI2 301 aa5.89□□□□□ -1.47
USP48-203ENST00000374732 TTTY13Q9BZ97 58 aa5.89□□□□□ -1.47
USP48-203ENST00000374732 PRUNE2Q8WUY3 3088 aa5.89□□□□□ -1.47
USP48-203ENST00000374732 OTOGLQ3ZCN5 2332 aa5.89□□□□□ -1.47
USP48-203ENST00000374732 TRBV12-3P01733 135 aa5.89□□□□□ -1.47
USP48-203ENST00000374732 ZNF32P17041 273 aa5.89□□□□□ -1.47
USP48-203ENST00000374732 NPPCP23582 126 aa5.89□□□□□ -1.47
USP48-203ENST00000374732 RHOHQ15669 191 aa5.89□□□□□ -1.47
USP48-203ENST00000374732 LINC01554Q52M75 96 aa5.89□□□□□ -1.47
USP48-203ENST00000374732 ZNF747Q9BV97 191 aa5.89□□□□□ -1.47
USP48-203ENST00000374732 COX7A2P2O60397 106 aa5.88□□□□□ -1.47
USP48-203ENST00000374732 CRIP2P52943 208 aaPredicted RBP5.88□□□□□ -1.47
USP48-203ENST00000374732 BLCAPP62952 87 aa5.88□□□□□ -1.47
USP48-203ENST00000374732 ATP1A1-AS1Q5TC04 95 aa5.88□□□□□ -1.47
USP48-203ENST00000374732 FAM30AQ9NZY2 134 aa5.88□□□□□ -1.47
USP48-203ENST00000374732 TRBV7-1A0A0A6YYK4 115 aa5.88□□□□□ -1.47
USP48-203ENST00000374732 PINLYPA6NC86 204 aa5.88□□□□□ -1.47
USP48-203ENST00000374732 ACYP1P07311 99 aa5.88□□□□□ -1.47
USP48-203ENST00000374732 C7orf65Q6ZTY9 151 aa5.88□□□□□ -1.47
USP48-203ENST00000374732 XCL1P47992 114 aa5.88□□□□□ -1.47
USP48-203ENST00000374732 Q6P435 159 aa5.88□□□□□ -1.47
USP48-203ENST00000374732 ABHD14BQ96IU4 210 aa5.88□□□□□ -1.47
USP48-203ENST00000374732 XCL2Q9UBD3 114 aa5.88□□□□□ -1.47
USP48-203ENST00000374732 USP34Q70CQ2 3546 aa5.87□□□□□ -1.47
USP48-203ENST00000374732 IGKV1-27A0A075B6S5 117 aa5.87□□□□□ -1.47
USP48-203ENST00000374732 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.87□□□□□ -1.47
USP48-203ENST00000374732 MRPL33O75394 65 aaKnown RBP5.87□□□□□ -1.47
USP48-203ENST00000374732 TWIST1Q15672 202 aa5.87□□□□□ -1.47
USP48-203ENST00000374732 SPINK14Q6IE38 97 aa5.87□□□□□ -1.47
USP48-203ENST00000374732 ZNRF1Q8ND25 227 aa5.87□□□□□ -1.47
USP48-203ENST00000374732 A0A1W2PNU3 283 aaPredicted RBP5.87□□□□□ -1.47
USP48-203ENST00000374732 FAM229BQ4G0N7 80 aa5.87□□□□□ -1.47
USP48-203ENST00000374732 DIRC1Q969H9 104 aa5.87□□□□□ -1.47
USP48-203ENST00000374732 IGHV1-69DA0A0B4J2H0 117 aa5.86□□□□□ -1.47
USP48-203ENST00000374732 FAM223BA6NKX1 122 aa5.86□□□□□ -1.47
USP48-203ENST00000374732 PPYP01298 95 aa5.86□□□□□ -1.47
USP48-203ENST00000374732 FGF12P61328 243 aa5.86□□□□□ -1.47
USP48-203ENST00000374732 TTTY12Q9BZ98 90 aa5.86□□□□□ -1.47
USP48-203ENST00000374732 SDK1Q7Z5N4 2213 aa5.86□□□□□ -1.47
USP48-203ENST00000374732 IGKV1D-17A0A075B6S4 117 aa5.86□□□□□ -1.47
USP48-203ENST00000374732 C12orf77C9JDV5 145 aa5.86□□□□□ -1.47
USP48-203ENST00000374732 C11orf94C9JXX5 98 aa5.86□□□□□ -1.47
USP48-203ENST00000374732 TFF1P04155 84 aa5.86□□□□□ -1.47
USP48-203ENST00000374732 PRR3P79522 188 aaKnown RBP5.86□□□□□ -1.47
USP48-203ENST00000374732 LPAL2Q16609 132 aa5.86□□□□□ -1.47
USP48-203ENST00000374732 SMCR5Q8TEV8 140 aa5.86□□□□□ -1.47
USP48-203ENST00000374732 CLEC2BQ92478 149 aa5.86□□□□□ -1.47
USP48-203ENST00000374732 FAM218AQ96MZ4 157 aa5.86□□□□□ -1.47
USP48-203ENST00000374732 SDK2Q58EX2 2172 aa5.86□□□□□ -1.47
USP48-203ENST00000374732 GNB1P62873 340 aa5.85□□□□□ -1.47
USP48-203ENST00000374732 LINC01600Q96MT4 127 aa5.85□□□□□ -1.47
USP48-203ENST00000374732 COL6A3P12111 3177 aa5.85□□□□□ -1.47
USP48-203ENST00000374732 SLC25A29Q8N8R3 303 aa5.85□□□□□ -1.47
USP48-203ENST00000374732 DOCK10Q96BY6 2186 aa5.84□□□□□ -1.47
USP48-203ENST00000374732 IGHV6-1A0A0B4J1U7 121 aa5.84□□□□□ -1.47
USP48-203ENST00000374732 IGKV1-12A0A0C4DH73 117 aa5.84□□□□□ -1.47
USP48-203ENST00000374732 IGKV1D-12P01611 117 aa5.84□□□□□ -1.47
USP48-203ENST00000374732 LINC00528Q8N1L1 170 aa5.84□□□□□ -1.47
USP48-203ENST00000374732 PIP4P2Q8N4L2 257 aa5.84□□□□□ -1.47
USP48-203ENST00000374732 SPTSSBQ8NFR3 76 aa5.84□□□□□ -1.47
USP48-203ENST00000374732 IGKV2D-26A0A0A0MRZ7 120 aa5.84□□□□□ -1.47
USP48-203ENST00000374732 PATE4P0C8F1 98 aa5.84□□□□□ -1.47
USP48-203ENST00000374732 IGHV4-31P0DP07 118 aa5.84□□□□□ -1.47
USP48-203ENST00000374732 CHCHD10Q8WYQ3 142 aaPredicted RBP5.83□□□□□ -1.48
USP48-203ENST00000374732 LY96Q9Y6Y9 160 aa5.83□□□□□ -1.48
USP48-203ENST00000374732 V9GYV3 84 aa5.83□□□□□ -1.48
USP48-203ENST00000374732 ZNF292O60281 2723 aa5.83□□□□□ -1.48
USP48-203ENST00000374732 TMEM30CPA0ZSE6 113 aa5.83□□□□□ -1.48
USP48-203ENST00000374732 PCNX2A6NKB5 2137 aa5.83□□□□□ -1.48
USP48-203ENST00000374732 S100A4P26447 101 aaKnown RBP5.83□□□□□ -1.48
USP48-203ENST00000374732 RNASE4P34096 147 aaKnown RBP5.83□□□□□ -1.48
USP48-203ENST00000374732 ZNF138P52744 262 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms