RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 CEND1Q8N111 149 aa7.68□□□□□ -1.18
PRPF38B-203ENST00000370025 MAPKAPK5-AS1Q8N8E1 139 aa7.68□□□□□ -1.18
PRPF38B-203ENST00000370025 C8orf49Q96NF6 230 aa7.68□□□□□ -1.18
PRPF38B-203ENST00000370025 TRGV3P03979 118 aa7.68□□□□□ -1.18
PRPF38B-203ENST00000370025 DEFB112Q30KQ8 113 aa7.68□□□□□ -1.18
PRPF38B-203ENST00000370025 C12orf74Q32Q52 190 aa7.68□□□□□ -1.18
PRPF38B-203ENST00000370025 Q86TA4 180 aa7.68□□□□□ -1.18
PRPF38B-203ENST00000370025 ORMDL3Q8N138 153 aa7.68□□□□□ -1.18
PRPF38B-203ENST00000370025 TMEM75Q8N9X5 138 aa7.68□□□□□ -1.18
PRPF38B-203ENST00000370025 TRBV19A0A075B6N1 114 aa7.67□□□□□ -1.18
PRPF38B-203ENST00000370025 RPL7P18124 248 aaKnown RBP7.67□□□□□ -1.18
PRPF38B-203ENST00000370025 FHL3Q13643 280 aa7.67□□□□□ -1.18
PRPF38B-203ENST00000370025 C19orf54Q5BKX5 351 aa7.67□□□□□ -1.18
PRPF38B-203ENST00000370025 LYPD1Q8N2G4 141 aa7.67□□□□□ -1.18
PRPF38B-203ENST00000370025 FMC1Q96HJ9 113 aa7.67□□□□□ -1.18
PRPF38B-203ENST00000370025 KIR2DL4Q99706 377 aa7.67□□□□□ -1.18
PRPF38B-203ENST00000370025 MSRB1Q9NZV6 116 aa7.67□□□□□ -1.18
PRPF38B-203ENST00000370025 TCTEX1D4Q5JR98 221 aa7.67□□□□□ -1.18
PRPF38B-203ENST00000370025 BLCAPP62952 87 aa7.67□□□□□ -1.18
PRPF38B-203ENST00000370025 CCDC140Q96MF4 163 aa7.67□□□□□ -1.18
PRPF38B-203ENST00000370025 KLF12Q9Y4X4 402 aa7.67□□□□□ -1.18
PRPF38B-203ENST00000370025 H3BUA1 57 aa7.66□□□□□ -1.18
PRPF38B-203ENST00000370025 MRPL51Q4U2R6 128 aaKnown RBP7.66□□□□□ -1.18
PRPF38B-203ENST00000370025 NFE4Q86UQ8 179 aa7.66□□□□□ -1.18
PRPF38B-203ENST00000370025 PGPEP1Q9NXJ5 209 aa7.66□□□□□ -1.18
PRPF38B-203ENST00000370025 FOXI1Q12951 378 aa7.66□□□□□ -1.18
PRPF38B-203ENST00000370025 PDE6HQ13956 83 aa7.66□□□□□ -1.18
PRPF38B-203ENST00000370025 NAV2Q8IVL1 2488 aa7.66□□□□□ -1.18
PRPF38B-203ENST00000370025 CR1P17927 2039 aa7.66□□□□□ -1.18
PRPF38B-203ENST00000370025 E9PLD3 99 aa7.66□□□□□ -1.18
PRPF38B-203ENST00000370025 MRPS12O15235 138 aaKnown RBP7.66□□□□□ -1.18
PRPF38B-203ENST00000370025 IGHV4-59P01825 116 aa7.66□□□□□ -1.18
PRPF38B-203ENST00000370025 PHLDA1Q8WV24 401 aaPredicted RBP7.66□□□□□ -1.18
PRPF38B-203ENST00000370025 IGKCP01834 107 aa7.65□□□□□ -1.18
PRPF38B-203ENST00000370025 ZFP2Q6ZN57 461 aa7.65□□□□□ -1.18
PRPF38B-203ENST00000370025 Q6ZUT4 128 aa7.65□□□□□ -1.18
PRPF38B-203ENST00000370025 USMG5Q96IX5 58 aa7.65□□□□□ -1.18
PRPF38B-203ENST00000370025 PSMG3-AS1Q96PY0 264 aa7.65□□□□□ -1.18
PRPF38B-203ENST00000370025 CDIP1Q9H305 208 aa7.65□□□□□ -1.18
PRPF38B-203ENST00000370025 BRI3O95415 125 aa7.65□□□□□ -1.18
PRPF38B-203ENST00000370025 HLA-DMBP28068 263 aa7.65□□□□□ -1.18
PRPF38B-203ENST00000370025 PF4V1P10720 104 aa7.65□□□□□ -1.19
PRPF38B-203ENST00000370025 SIGLEC15Q6ZMC9 328 aa7.65□□□□□ -1.19
PRPF38B-203ENST00000370025 MRPL35Q9NZE8 188 aaKnown RBP7.65□□□□□ -1.19
PRPF38B-203ENST00000370025 FBN2P35556 2912 aa7.64□□□□□ -1.19
PRPF38B-203ENST00000370025 SIVA1O15304 175 aa7.64□□□□□ -1.19
PRPF38B-203ENST00000370025 HTN1P15515 57 aa7.64□□□□□ -1.19
PRPF38B-203ENST00000370025 ZFAND3Q9H8U3 227 aa7.64□□□□□ -1.19
PRPF38B-203ENST00000370025 ABCA12Q86UK0 2595 aa7.64□□□□□ -1.19
PRPF38B-203ENST00000370025 FSHBP01225 129 aa7.64□□□□□ -1.19
PRPF38B-203ENST00000370025 CRIP1P50238 77 aa7.64□□□□□ -1.19
PRPF38B-203ENST00000370025 C9orf139Q6ZV77 190 aa7.64□□□□□ -1.19
PRPF38B-203ENST00000370025 METTL26Q96S19 204 aa7.64□□□□□ -1.19
PRPF38B-203ENST00000370025 C1QTNF4Q9BXJ3 329 aa7.64□□□□□ -1.19
PRPF38B-203ENST00000370025 ZNF492Q9P255 531 aa7.64□□□□□ -1.19
PRPF38B-203ENST00000370025 H7C2G1 150 aa7.64□□□□□ -1.19
PRPF38B-203ENST00000370025 TMEM158Q8WZ71 300 aa7.64□□□□□ -1.19
PRPF38B-203ENST00000370025 LINC01549A6NIU2 74 aa7.63□□□□□ -1.19
PRPF38B-203ENST00000370025 CT83Q5H943 113 aa7.63□□□□□ -1.19
PRPF38B-203ENST00000370025 FAM104BQ5XKR9 115 aa7.63□□□□□ -1.19
PRPF38B-203ENST00000370025 HIST2H2BCQ6DN03 193 aa7.63□□□□□ -1.19
PRPF38B-203ENST00000370025 Q6ZS46 218 aa7.63□□□□□ -1.19
PRPF38B-203ENST00000370025 GFRA4Q9GZZ7 299 aa7.63□□□□□ -1.19
PRPF38B-203ENST00000370025 HHLA3Q9XRX5 114 aa7.63□□□□□ -1.19
PRPF38B-203ENST00000370025 PRRC2AP48634 2157 aaKnown RBP7.63□□□□□ -1.19
PRPF38B-203ENST00000370025 ODF1Q14990 250 aa7.63□□□□□ -1.19
PRPF38B-203ENST00000370025 KRTAP1-3Q8IUG1 177 aa7.63□□□□□ -1.19
PRPF38B-203ENST00000370025 ZNF580Q9UK33 172 aa7.63□□□□□ -1.19
PRPF38B-203ENST00000370025 RRN3P1Q2M238 152 aa7.63□□□□□ -1.19
PRPF38B-203ENST00000370025 Q6YL49 198 aa7.63□□□□□ -1.19
PRPF38B-203ENST00000370025 TEX29Q8N6K0 151 aa7.63□□□□□ -1.19
PRPF38B-203ENST00000370025 A0A1B0GW15 77 aa7.62□□□□□ -1.19
PRPF38B-203ENST00000370025 HLA-DRB4P13762 266 aa7.62□□□□□ -1.19
PRPF38B-203ENST00000370025 SCGB1D4Q6XE38 83 aa7.62□□□□□ -1.19
PRPF38B-203ENST00000370025 VPREB3Q9UKI3 123 aa7.62□□□□□ -1.19
PRPF38B-203ENST00000370025 HLA-DRB4X5D2U9 266 aa7.62□□□□□ -1.19
PRPF38B-203ENST00000370025 CHD6Q8TD26 2715 aa7.62□□□□□ -1.19
PRPF38B-203ENST00000370025 KMT2BQ9UMN6 2715 aaPredicted RBP7.62□□□□□ -1.19
PRPF38B-203ENST00000370025 CELSR2Q9HCU4 2923 aa7.62□□□□□ -1.19
PRPF38B-203ENST00000370025 TRAV26-2A0A0B4J265 109 aa7.62□□□□□ -1.19
PRPF38B-203ENST00000370025 BUB3O43684 328 aa7.62□□□□□ -1.19
PRPF38B-203ENST00000370025 SCGB1C2P0DMR2 95 aa7.62□□□□□ -1.19
PRPF38B-203ENST00000370025 S100A4P26447 101 aaKnown RBP7.62□□□□□ -1.19
PRPF38B-203ENST00000370025 GAGE5Q13069 117 aa7.62□□□□□ -1.19
PRPF38B-203ENST00000370025 GAGE6Q13070 117 aa7.62□□□□□ -1.19
PRPF38B-203ENST00000370025 SRSF9Q13242 221 aaKnown RBP eCLIP7.62□□□□□ -1.19
PRPF38B-203ENST00000370025 RNF182Q8N6D2 247 aa7.62□□□□□ -1.19
PRPF38B-203ENST00000370025 ERG28Q9UKR5 140 aa7.62□□□□□ -1.19
PRPF38B-203ENST00000370025 TRBV6-1A0A0K0K1D8 114 aa7.62□□□□□ -1.19
PRPF38B-203ENST00000370025 IGKV3-20P01619 116 aa7.62□□□□□ -1.19
PRPF38B-203ENST00000370025 IGLV1-40P01703 118 aa7.62□□□□□ -1.19
PRPF38B-203ENST00000370025 IGLV2-11P01706 119 aa7.62□□□□□ -1.19
PRPF38B-203ENST00000370025 SRD5A1P18405 259 aa7.62□□□□□ -1.19
PRPF38B-203ENST00000370025 ERCC8Q13216 396 aa7.62□□□□□ -1.19
PRPF38B-203ENST00000370025 TM2D2Q9BX73 214 aa7.62□□□□□ -1.19
PRPF38B-203ENST00000370025 HOXA3O43365 443 aaPredicted RBP7.61□□□□□ -1.19
PRPF38B-203ENST00000370025 DPM2O94777 84 aa7.61□□□□□ -1.19
PRPF38B-203ENST00000370025 SMCPP49901 116 aaPredicted RBP7.61□□□□□ -1.19
PRPF38B-203ENST00000370025 VPS13CQ709C8 3753 aa7.61□□□□□ -1.19
PRPF38B-203ENST00000370025 TRBV7-9A0A0J9YWB2 115 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms