RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 C17orf77Q96MU5 243 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 PAXXQ9BUH6 204 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 C16orf95Q9H693 158 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 PLEKHA3Q9HB20 300 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 SPG11Q96JI7 2443 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 A0A087WZ39 114 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 C16orf97H3BN30 126 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 C5orf38Q86SI9 138 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 LINC00643Q86TS7 51 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 MAPKAPK5-AS1Q8N8E1 139 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 TTTY12Q9BZ98 90 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 SERP1Q9Y6X1 66 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 NBASA2RRP1 2371 aa3.85□□□□□ -1.79
UBE3D-202ENST00000369746 WI2-2373I1.2A0A1W2PRP0 233 aa3.85□□□□□ -1.79
UBE3D-202ENST00000369746 SLC25A20O43772 301 aa3.85□□□□□ -1.79
UBE3D-202ENST00000369746 PYYP10082 97 aa3.85□□□□□ -1.79
UBE3D-202ENST00000369746 RSPO1Q2MKA7 263 aaPredicted RBP3.85□□□□□ -1.79
UBE3D-202ENST00000369746 Q6ZVQ6 151 aa3.85□□□□□ -1.79
UBE3D-202ENST00000369746 PRNTQ86SH4 94 aa3.85□□□□□ -1.79
UBE3D-202ENST00000369746 DRAM1Q8N682 238 aa3.85□□□□□ -1.79
UBE3D-202ENST00000369746 HS3ST6Q96QI5 342 aa3.85□□□□□ -1.79
UBE3D-202ENST00000369746 EPDR1Q9UM22 224 aa3.85□□□□□ -1.79
UBE3D-202ENST00000369746 HHLA3Q9XRX5 114 aa3.85□□□□□ -1.79
UBE3D-202ENST00000369746 NAV3Q8IVL0 2385 aa3.85□□□□□ -1.79
UBE3D-202ENST00000369746 NSD1Q96L73 2696 aaPredicted RBP3.85□□□□□ -1.79
UBE3D-202ENST00000369746 H3BT86 120 aa3.85□□□□□ -1.79
UBE3D-202ENST00000369746 FOXS1O43638 330 aa3.85□□□□□ -1.79
UBE3D-202ENST00000369746 IGLV3-1P01715 115 aa3.85□□□□□ -1.79
UBE3D-202ENST00000369746 HBDP02042 147 aa3.85□□□□□ -1.79
UBE3D-202ENST00000369746 ARL14EPLP0DKL9 152 aa3.85□□□□□ -1.79
UBE3D-202ENST00000369746 SSR2P43308 183 aa3.85□□□□□ -1.79
UBE3D-202ENST00000369746 CCL8P80075 99 aa3.85□□□□□ -1.79
UBE3D-202ENST00000369746 C11orf71Q6IPW1 123 aa3.85□□□□□ -1.79
UBE3D-202ENST00000369746 PRR15Q8IV56 129 aa3.85□□□□□ -1.79
UBE3D-202ENST00000369746 CR1P17927 2039 aa3.84□□□□□ -1.79
UBE3D-202ENST00000369746 IGKV1D-42A0A075B6H8 117 aa3.84□□□□□ -1.79
UBE3D-202ENST00000369746 TRBV6-6A0A0A6YYG2 114 aa3.84□□□□□ -1.79
UBE3D-202ENST00000369746 C19orf71A6NCJ1 209 aa3.84□□□□□ -1.79
UBE3D-202ENST00000369746 EIF4EBP3O60516 100 aaPredicted RBP3.84□□□□□ -1.79
UBE3D-202ENST00000369746 ZNF823P16415 610 aa3.84□□□□□ -1.79
UBE3D-202ENST00000369746 REG3AQ06141 175 aa3.84□□□□□ -1.79
UBE3D-202ENST00000369746 RUSC1-AS1Q66K80 236 aa3.84□□□□□ -1.79
UBE3D-202ENST00000369746 WWC2-AS2Q96NR7 200 aa3.84□□□□□ -1.79
UBE3D-202ENST00000369746 PCNX3Q9H6A9 2034 aa3.84□□□□□ -1.79
UBE3D-202ENST00000369746 DOCK10Q96BY6 2186 aa3.84□□□□□ -1.8
UBE3D-202ENST00000369746 SMIM26A0A096LP01 95 aa3.84□□□□□ -1.8
UBE3D-202ENST00000369746 TRAV8-1A0A0A6YYK1 113 aa3.84□□□□□ -1.8
UBE3D-202ENST00000369746 PSMB2P49721 201 aa3.84□□□□□ -1.8
UBE3D-202ENST00000369746 FXYD4P59646 89 aa3.84□□□□□ -1.8
UBE3D-202ENST00000369746 RPL18Q07020 188 aaKnown RBP3.84□□□□□ -1.8
UBE3D-202ENST00000369746 TWIST1Q15672 202 aa3.84□□□□□ -1.8
UBE3D-202ENST00000369746 KISS1Q15726 138 aa3.84□□□□□ -1.8
UBE3D-202ENST00000369746 CYYR1Q96J86 154 aa3.84□□□□□ -1.8
UBE3D-202ENST00000369746 TM2D3Q9BRN9 247 aa3.84□□□□□ -1.8
UBE3D-202ENST00000369746 KRTAP3-3Q9BYR6 98 aa3.84□□□□□ -1.8
UBE3D-202ENST00000369746 KRTAP3-2Q9BYR7 98 aa3.84□□□□□ -1.8
UBE3D-202ENST00000369746 U3KQK5 164 aa3.84□□□□□ -1.8
UBE3D-202ENST00000369746 FSHBP01225 129 aa3.83□□□□□ -1.8
UBE3D-202ENST00000369746 CA6P23280 308 aa3.83□□□□□ -1.8
UBE3D-202ENST00000369746 EFNA4P52798 201 aa3.83□□□□□ -1.8
UBE3D-202ENST00000369746 UBE2L3P68036 154 aaKnown RBP3.83□□□□□ -1.8
UBE3D-202ENST00000369746 SRSF9Q13242 221 aaKnown RBP eCLIP3.83□□□□□ -1.8
UBE3D-202ENST00000369746 LINC00305Q7Z4B0 112 aa3.83□□□□□ -1.8
UBE3D-202ENST00000369746 RNF182Q8N6D2 247 aa3.83□□□□□ -1.8
UBE3D-202ENST00000369746 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.83□□□□□ -1.8
UBE3D-202ENST00000369746 NOTCH2Q04721 2471 aa3.83□□□□□ -1.8
UBE3D-202ENST00000369746 IGKV1D-43A0A0B4J1Z2 117 aa3.83□□□□□ -1.8
UBE3D-202ENST00000369746 TRAV41A0A0B4J266 112 aa3.83□□□□□ -1.8
UBE3D-202ENST00000369746 TRBV10-2A0A0K0K1G8 114 aa3.83□□□□□ -1.8
UBE3D-202ENST00000369746 H3BMM0 161 aa3.83□□□□□ -1.8
UBE3D-202ENST00000369746 UPK2O00526 184 aa3.83□□□□□ -1.8
UBE3D-202ENST00000369746 NDUFS5O43920 106 aa3.83□□□□□ -1.8
UBE3D-202ENST00000369746 P0C879 139 aa3.83□□□□□ -1.8
UBE3D-202ENST00000369746 ZNF816Q0VGE8 651 aaPredicted RBP3.83□□□□□ -1.8
UBE3D-202ENST00000369746 KRTAP27-1Q3LI81 207 aa3.83□□□□□ -1.8
UBE3D-202ENST00000369746 SPANXN5Q5MJ07 72 aa3.83□□□□□ -1.8
UBE3D-202ENST00000369746 CRIP3Q6Q6R5 217 aa3.83□□□□□ -1.8
UBE3D-202ENST00000369746 UBE2WQ96B02 151 aa3.83□□□□□ -1.8
UBE3D-202ENST00000369746 HIST1H4GQ99525 98 aa3.83□□□□□ -1.8
UBE3D-202ENST00000369746 UPK3BQ9BT76 320 aa3.83□□□□□ -1.8
UBE3D-202ENST00000369746 C7orf69Q9H7B7 122 aa3.83□□□□□ -1.8
UBE3D-202ENST00000369746 Q9HAA7 133 aa3.83□□□□□ -1.8
UBE3D-202ENST00000369746 TRGV11A0A075B6L2 103 aa3.82□□□□□ -1.8
UBE3D-202ENST00000369746 LOC100131303A0A0U1RQF7 123 aa3.82□□□□□ -1.8
UBE3D-202ENST00000369746 HIGD1CA8MV81 97 aa3.82□□□□□ -1.8
UBE3D-202ENST00000369746 TCL1BO95988 128 aa3.82□□□□□ -1.8
UBE3D-202ENST00000369746 ZNF818PQ6ZRF7 136 aa3.82□□□□□ -1.8
UBE3D-202ENST00000369746 NDUFA11Q86Y39 141 aa3.82□□□□□ -1.8
UBE3D-202ENST00000369746 LINC00337Q8N6G1 96 aa3.82□□□□□ -1.8
UBE3D-202ENST00000369746 SERP2Q8N6R1 65 aa3.82□□□□□ -1.8
UBE3D-202ENST00000369746 SMIM14Q96QK8 99 aa3.82□□□□□ -1.8
UBE3D-202ENST00000369746 DEFB126Q9BYW3 111 aa3.82□□□□□ -1.8
UBE3D-202ENST00000369746 GON4LQ3T8J9 2241 aa3.82□□□□□ -1.8
UBE3D-202ENST00000369746 A0A096LNJ9 63 aa3.82□□□□□ -1.8
UBE3D-202ENST00000369746 ADARB2-AS1A8MUL3 147 aa3.82□□□□□ -1.8
UBE3D-202ENST00000369746 BCE1O60756 84 aa3.82□□□□□ -1.8
UBE3D-202ENST00000369746 LTAP01374 205 aa3.82□□□□□ -1.8
UBE3D-202ENST00000369746 RNASE1P07998 156 aaKnown RBP3.82□□□□□ -1.8
UBE3D-202ENST00000369746 IGLV3-21P80748 117 aaPredicted RBP3.82□□□□□ -1.8
UBE3D-202ENST00000369746 SS18Q15532 418 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms