RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Ptbp1P17225 527 aaKnown RBP11.05□□□□□ -0.64
Clcn3-204ENSMUST00000110301 1700009N14RikQ14AA6 216 aaKnown RBP11.05□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Pgpep1lQ9CWB5 130 aa11.05□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Olfr961Q9EQ84 314 aa11.05□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Trav23A0A0G2JG17 115 aa11.05□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Lce6aD3YV94 81 aa11.05□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Tstd1E9PY03 133 aa11.05□□□□□ -0.64
Clcn3-204ENSMUST00000110301 LtaP09225 202 aa11.05□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Fam222bQ6P539 562 aa11.05□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Olfr491Q8VG06 310 aa11.05□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Ighv7-2A0A0A6YX91 119 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Ighv8-9A0A0G2JET1 119 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Zfp109A0A0U1RPC5 652 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Olfr1124A2AT86 318 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 LalbaP29752 143 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 RanP62827 216 aaKnown RBP11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Ceacam12Q3UKP4 300 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Spint3Q3UW09 88 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Olfr1465Q7TQR2 307 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Siglec12Q91Y57 467 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Ms4a8Q99N10 290 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 AmtnQ9D3J8 213 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Ccpg1osV9GXK1 122 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Zfp979A2A799 407 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 4931422A03RikA2BHN9 113 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Zfp27P10077 819 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Pax6P63015 422 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Dtx1Q61010 627 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Znrd1Q791N7 123 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Olfr411Q7TRW8 315 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Mrps10Q80ZK0 160 aaKnown RBP11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Fgfrl1Q91V87 529 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Srp19Q9D7A6 144 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 PigpQ9JHG1 132 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Cd5lQ9QWK4 352 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Nav2E9Q842 2432 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Pde6dO55057 150 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Ccl1P10146 92 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Olfr1042Q7TR81 313 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Srsf7Q8BL97 267 aaKnown RBP11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Fam174bQ8K064 153 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 B3gnt9Q8VI16 399 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Olfr1383Q7TQT2 311 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 C130073F10RikQ8C4L8 201 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Olfr1445Q8VFW9 314 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Znf672Q99LH4 468 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 G6pc2Q9Z186 355 aa11.04□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Ighv1-36A0A0A6YXT2 117 aa11.03□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Olfr1220F7BL62 311 aa11.03□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Crisp3Q03402 241 aa11.03□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Hif1anQ8BLR9 349 aa11.03□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Smim8Q9CQQ0 97 aa11.03□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Znf22Q9ERU3 237 aa11.03□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Cd74P04441 279 aa11.03□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Cd3eP22646 189 aa11.03□□□□□ -0.64
Clcn3-204ENSMUST00000110301 FusP56959 518 aaKnown RBP11.03□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Rtl4Q3URY0 304 aa11.03□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Ifna12Q80SS5 189 aa11.03□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Rhebl1Q9D8T3 184 aa11.03□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Vamp5Q9Z2P8 102 aa11.03□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Bod1lE9Q6J5 3032 aa11.03□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Gm12355A2A4X6 163 aa11.03□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Gstp2P46425 210 aa11.03□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Srsf3P84104 164 aaKnown RBP11.03□□□□□ -0.64
Clcn3-204ENSMUST00000110301 KhkP97328 298 aa11.03□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Fam168aQ8BGZ2 244 aa11.03□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Eda2rQ8BX35 297 aa11.03□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Olfr1337A2ACY8 315 aa11.02□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Sox15P43267 231 aa11.02□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Trdv4Q5R1A3 115 aa11.02□□□□□ -0.64
Clcn3-204ENSMUST00000110301 SlaQ60898 281 aa11.02□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Rtn4rl2Q7M6Z0 420 aa11.02□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Spsb4Q8R5B6 273 aa11.02□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Gar1Q9CY66 231 aaKnown RBP11.02□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Kcnmb2Q9CZM9 235 aa11.02□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Dram1Q9DC58 238 aa11.02□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Rab9aQ9R0M6 201 aa11.02□□□□□ -0.64
Clcn3-204ENSMUST00000110301 Ighv5-9A0A075B5Q2 117 aa11.02□□□□□ -0.65
Clcn3-204ENSMUST00000110301 Gm4565A0A140LJ87 301 aa11.02□□□□□ -0.65
Clcn3-204ENSMUST00000110301 Ctxnd2A0A1B0GQX3 59 aa11.02□□□□□ -0.65
Clcn3-204ENSMUST00000110301 Gm6176J3QK59 301 aa11.02□□□□□ -0.65
Clcn3-204ENSMUST00000110301 Gm10666K7N6B8 321 aa11.02□□□□□ -0.65
Clcn3-204ENSMUST00000110301 Lynx1P0DP60 116 aa11.02□□□□□ -0.65
Clcn3-204ENSMUST00000110301 Tpsab1Q02844 273 aa11.02□□□□□ -0.65
Clcn3-204ENSMUST00000110301 Gm4567Q3UTA8 301 aa11.02□□□□□ -0.65
Clcn3-204ENSMUST00000110301 Megf10Q6DIB5 1147 aa11.02□□□□□ -0.65
Clcn3-204ENSMUST00000110301 Olfr1371Q7TQT7 311 aa11.02□□□□□ -0.65
Clcn3-204ENSMUST00000110301 AdtrpQ8C138 230 aa11.02□□□□□ -0.65
Clcn3-204ENSMUST00000110301 Pbp2Q8VIN1 187 aa11.02□□□□□ -0.65
Clcn3-204ENSMUST00000110301 Mrpl18Q9CQL5 180 aa11.02□□□□□ -0.65
Clcn3-204ENSMUST00000110301 Gm28171A0A087WQ19 227 aa11.02□□□□□ -0.65
Clcn3-204ENSMUST00000110301 Gm5819E9PZ96 154 aa11.02□□□□□ -0.65
Clcn3-204ENSMUST00000110301 Loxl1P97873 607 aa11.02□□□□□ -0.65
Clcn3-204ENSMUST00000110301 Tmem204Q7TQI0 226 aa11.02□□□□□ -0.65
Clcn3-204ENSMUST00000110301 Stpg2Q8C8J0 561 aa11.02□□□□□ -0.65
Clcn3-204ENSMUST00000110301 A930004D18RikQ8C8W7 157 aa11.02□□□□□ -0.65
Clcn3-204ENSMUST00000110301 Olfr303Q8VFP0 319 aa11.02□□□□□ -0.65
Clcn3-204ENSMUST00000110301 Lmo1Q924W9 156 aa11.02□□□□□ -0.65
Clcn3-204ENSMUST00000110301 Trav12d-1A0N8R0 115 aa11.01□□□□□ -0.65
Clcn3-204ENSMUST00000110301 P18525 117 aa11.01□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 57.8 ms