RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Snrpd3P62320 126 aaKnown RBP13.5□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Ltbp3Q61810 1268 aa13.5□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Vsig8Q6P3A4 417 aa13.5□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Olfr1258Q8VGN6 311 aa13.5□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Dll3O88516 592 aa13.5□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Rpl32P62911 135 aaKnown RBP13.5□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Slc17a3G3UWD9 498 aa13.5□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Gm20873J3QMQ9 232 aa13.5□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Fam3dP97805 223 aa13.5□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Klk10Q99M20 278 aa13.5□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Q9D727 114 aa13.49□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Sumo3Q9Z172 110 aa13.49□□□□□ -0.25
Ubr3-201ENSMUST00000055758 H2al1oL7MU04 110 aa13.49□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Tm4sf20Q9CQY8 226 aa13.49□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Dctn5Q9QZB9 182 aa13.49□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Zfp707F6QUN2 391 aa13.49□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Trav15-1-dv6-1Q5R1D2 117 aa13.49□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Tmem106bQ80X71 275 aa13.49□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Vmn1r216Q8R257 298 aa13.49□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Akip1Q9JJR5 212 aa13.49□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Hivep3A2A884 2348 aa13.49□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Fdx2Q9CPW2 174 aa13.49□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Ccl28Q9JIL2 130 aa13.49□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Trbv30A0A0B4J1P1 111 aa13.49□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Hoxd3P09027 433 aa13.49□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Igfbp3P47878 292 aa13.49□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Klf2Q60843 354 aaKnown RBP13.49□□□□□ -0.25
Ubr3-201ENSMUST00000055758 AdoQ6PDY2 256 aa13.49□□□□□ -0.25
Ubr3-201ENSMUST00000055758 PpifQ99KR7 206 aaKnown RBP13.49□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Gm45783A0A1B0GT48 74 aa13.48□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Cnr2P47936 347 aa13.48□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Spsb4Q8R5B6 273 aa13.48□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Phpt1Q9DAK9 124 aa13.48□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Dkk2Q9QYZ8 259 aa13.48□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Tex54G3UW99 86 aa13.48□□□□□ -0.25
Ubr3-201ENSMUST00000055758 P01664 111 aa13.48□□□□□ -0.25
Ubr3-201ENSMUST00000055758 P18524 117 aa13.48□□□□□ -0.25
Ubr3-201ENSMUST00000055758 MiaQ61865 130 aa13.48□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Tmem189Q99LQ7 271 aa13.48□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Cep290Q6A078 2472 aa13.48□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Trav13d-3J3QMG8 112 aa13.48□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Rps11P62281 158 aaKnown RBP13.48□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Prr30Q9D9B7 401 aa13.48□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Mmp17Q9R0S3 578 aa13.48□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Gm21731A0A286YDE9 180 aa13.48□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Sf3b5Q923D4 86 aaKnown RBP13.48□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Tmem126aQ9D8Y1 196 aa13.48□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Erv3Q9DAX3 200 aa13.48□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Trav3n-3A0A0G2JEM0 114 aa13.48□□□□□ -0.25
Ubr3-201ENSMUST00000055758 H2-DMb2Q31099 261 aa13.48□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Sdr39u1Q5M8N4 308 aa13.48□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Mzt1Q8BUR9 78 aa13.48□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Vmn1r232A2RTT5 351 aa13.48□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Gm20696H3BJN7 74 aa13.48□□□□□ -0.25
Ubr3-201ENSMUST00000055758 C4bP01029 1738 aa13.47□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Bsph1Q3UW26 133 aa13.47□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Cd200r4Q6XJV4 270 aa13.47□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Q8VCE4 163 aa13.47□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Brca1P48754 1812 aa13.47□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Znf385aQ8VD12 386 aaKnown RBP13.47□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Trbv29A0A0G2LB96 114 aa13.47□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Irf2bp2E9Q1P8 570 aa13.47□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Q3UNZ8 350 aa13.47□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Gm17732E9Q5I2 61 aa13.47□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Q149G0 166 aaKnown RBP13.47□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Q8CF25 301 aa13.47□□□□□ -0.25
Ubr3-201ENSMUST00000055758 AmtnQ9D3J8 213 aa13.47□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Ssty2Q149W4 227 aa13.47□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Klf7Q99JB0 301 aa13.47□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Saa2P05367 122 aa13.47□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Fgf12P61329 243 aa13.47□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Rpl8P62918 257 aaKnown RBP13.46□□□□□ -0.25
Ubr3-201ENSMUST00000055758 TslpQ9JIE6 140 aa13.46□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Igkv10-96A0A140T8M1 115 aa13.46□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Tgfbr3lD3YZZ2 297 aa13.46□□□□□ -0.25
Ubr3-201ENSMUST00000055758 A630076J17RikJ3QQ32 107 aa13.46□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Opn3Q9WUK7 400 aa13.46□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Utp23Q9CX11 249 aaKnown RBP13.46□□□□□ -0.25
Ubr3-201ENSMUST00000055758 LipiF6YQT7 476 aa13.46□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Gm933J3QPC1 141 aa13.46□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Hoxb3P09026 433 aa13.46□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Acp7Q8BX37 438 aa13.46□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Olfr476Q8VGI4 310 aa13.46□□□□□ -0.25
Ubr3-201ENSMUST00000055758 SdhdQ9CXV1 159 aa13.46□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Igkv4-70A0A0B4J1I5 116 aa13.46□□□□□ -0.26
Ubr3-201ENSMUST00000055758 Adamtsl1Q8BLI0 1745 aa13.46□□□□□ -0.26
Ubr3-201ENSMUST00000055758 Mpig6bD7PDD4 242 aa13.46□□□□□ -0.26
Ubr3-201ENSMUST00000055758 Gstp2P46425 210 aa13.46□□□□□ -0.26
Ubr3-201ENSMUST00000055758 Gm10277Q6R5C6 214 aa13.46□□□□□ -0.26
Ubr3-201ENSMUST00000055758 Dirc2Q8BFQ6 478 aa13.46□□□□□ -0.26
Ubr3-201ENSMUST00000055758 Tnfrsf13cQ9D8D0 175 aa13.46□□□□□ -0.26
Ubr3-201ENSMUST00000055758 Ss18Q62280 418 aa13.45□□□□□ -0.26
Ubr3-201ENSMUST00000055758 Gm6525A0A0A6YW33 106 aa13.45□□□□□ -0.26
Ubr3-201ENSMUST00000055758 Trav13n-4A0A0G2JG01 110 aa13.45□□□□□ -0.26
Ubr3-201ENSMUST00000055758 Gm4881A0A140LIR9 352 aa13.45□□□□□ -0.26
Ubr3-201ENSMUST00000055758 MosP00536 390 aa13.45□□□□□ -0.26
Ubr3-201ENSMUST00000055758 TinagQ9WUR0 475 aa13.45□□□□□ -0.26
Ubr3-201ENSMUST00000055758 GzmbP04187 247 aa13.45□□□□□ -0.26
Ubr3-201ENSMUST00000055758 SelenotP62342 195 aa13.45□□□□□ -0.26
Ubr3-201ENSMUST00000055758 Lrrc25Q8K1T1 297 aa13.45□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 37.3 ms