RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Ighv1-47A0A0A6YY41 117 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 Siglec15A7E1W8 342 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr920E9Q413 310 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 Gm21310J3QQ23 232 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 BatfO35284 125 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 Zfp58P16372 489 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 Pfn1P62962 140 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 Pate4Q09098 99 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 AgerQ62151 402 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 Cd33Q63994 403 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 Ythdf2Q91YT7 579 aaKnown RBP9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 DnlzQ9D113 177 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 Sfrp4Q9Z1N6 351 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 Gm21778A0A087WNP8 232 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 Ighv5-2A0A0A6YVX8 117 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr282A1L1B4 308 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 P06323 132 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 Sfrp2P97299 295 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 Dnd1Q6VY05 352 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 Slc25a29Q8BL03 306 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 RnasekQ8K3C0 98 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr1457Q8VFK3 317 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr1262Q8VGN2 304 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 Lmo1Q924W9 156 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 Rhox7bA6PW38 321 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 Fgfbp1O70514 251 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 Ifna4P07351 186 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 Foxa2P35583 459 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 ElaneQ3UP87 265 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr963Q7TRA9 311 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 Nhp2Q9CRB2 153 aaKnown RBP9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 4930583I09RikQ9D2E3 102 aa9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 Mbnl1Q9JKP5 341 aaKnown RBP9.09□□□□□ -0.95
Msh3-201ENSMUST00000022220 Gm10638F6QEG2 257 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Gm20532G3UXR8 106 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Gm6594J3QM43 95 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 P18528 98 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 UngP97931 306 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Gm10775Q3V290 127 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Hapln4Q80WM4 400 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Rnf182Q8C432 247 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Vstm2aQ8R0A6 236 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Mrpl13Q9D1P0 178 aaKnown RBP9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Ccl28Q9JIL2 130 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Try5Q9QUK9 246 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Try4Q9R0T7 246 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Trav6d-5A0A075B6B9 112 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Gm45213A0A0U1RNZ6 101 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Olfr284A0A0U1RP76 321 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Scgb2a2J3KMP9 96 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Cldn1O88551 211 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 C1qtnf9Q4ZJN1 333 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Olfr148Q60887 310 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Tas2r114Q7M722 309 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Mgst1Q91VS7 155 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Supt4h1bQ9Z199 117 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Fer1l4A3KGK3 1992 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Olfr1436A0PK57 315 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Zfp931A2AHM2 298 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Gm14412A2ARR7 526 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Olfr467L7N455 308 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Nkx2-8O70584 235 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Ca2P00920 260 aaKnown RBP9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Smim9Q3V0X1 137 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Olfr470Q8VF65 314 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Fgfrl1Q91V87 529 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Rnf2Q9CQJ4 336 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 H2al3Q9D4U4 128 aa9.08□□□□□ -0.96
Msh3-201ENSMUST00000022220 Ighv8-2A0A0A6YW58 119 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 9830107B12RikD3Z5D6 160 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 S100a8P27005 89 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 Gnb4P29387 340 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 Prrx1P63013 245 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 Olfr1362Q5SZZ8 308 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 Ppp1r3cQ7TMB3 317 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 Cdcp2Q8BQH6 427 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 Defa22Q8C1N8 93 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 Nit1Q8VDK1 323 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 Pxmp4Q9JJW0 212 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 Arhgap21Q6DFV3 1944 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 Pcnx2Q5DU28 2122 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 Olfr466E9Q2B9 308 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 Mef2bO55087 349 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 PspnO70300 156 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 Hoxa3P02831 443 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 Olfr495Q8VF12 330 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 Olfr492Q8VFD1 314 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 EpcamQ99JW5 315 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 Golt1bQ9CR60 138 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 Psmb2Q9R1P3 201 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 Heatr5aQ5PRF0 2038 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 1700084M14RikB1AT01 78 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 P01655 112 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 Defb33Q30KN3 62 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 Gm10842Q3U587 122 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 Rab1bQ9D1G1 201 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 4930412O13RikQ9D5M9 106 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 Chst5Q9QUP4 395 aa9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 Ranbp2Q9ERU9 3053 aaKnown RBP9.07□□□□□ -0.96
Msh3-201ENSMUST00000022220 Olfr1098A2AVB0 315 aa9.06□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms