RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 MSMBP08118 114 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 SNCAP37840 140 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 XCL1P47992 114 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 ROMO1P60602 79 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 LSM3P62310 102 aaKnown RBP1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 FAM229BQ4G0N7 80 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 C2orf91Q6ZV80 131 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 KRTAP13-1Q8IUC0 172 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 C10orf105Q8TEF2 133 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 HYLS1Q96M11 299 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 ZNF714Q96N38 554 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 LINC00467Q9BRT7 94 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 TAS2R4Q9NYW5 299 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 AP4S1Q9Y587 144 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 FAM215AQ9Y5M1 114 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 LY96Q9Y6Y9 160 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 RIC1Q4ADV7 1423 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 PLXNA3P51805 1871 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 SDK2Q58EX2 2172 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 TOPAZ1Q8N9V7 1692 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 ZFC3H1O60293 1989 aaKnown RBP1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 PCNX2A6NKB5 2137 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 HIVEP2P31629 2446 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 MYH1P12882 1939 aa1.95□□□□□ -2.1
SMCHD1-213ENST00000609587 MYLKQ15746 1914 aa1.95□□□□□ -2.1
SMCHD1-213ENST00000609587 INO80Q9ULG1 1556 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-213ENST00000609587 EEA1Q15075 1411 aa1.95□□□□□ -2.1
SMCHD1-213ENST00000609587 IGLV10-54A0A075B6I4 117 aa1.95□□□□□ -2.1
SMCHD1-213ENST00000609587 TRAV1-1A0A0B4J248 108 aa1.95□□□□□ -2.1
SMCHD1-213ENST00000609587 F8W1H4 67 aa1.95□□□□□ -2.1
SMCHD1-213ENST00000609587 GNRH2O43555 120 aa1.95□□□□□ -2.1
SMCHD1-213ENST00000609587 UBL3O95164 117 aa1.95□□□□□ -2.1
SMCHD1-213ENST00000609587 SLC25A6P12236 298 aa1.95□□□□□ -2.1
SMCHD1-213ENST00000609587 ASIPP42127 132 aa1.95□□□□□ -2.1
SMCHD1-213ENST00000609587 RPL28P46779 137 aaKnown RBP1.95□□□□□ -2.1
SMCHD1-213ENST00000609587 PEA15Q15121 130 aa1.95□□□□□ -2.1
SMCHD1-213ENST00000609587 ALKAL2Q6UX46 152 aa1.95□□□□□ -2.1
SMCHD1-213ENST00000609587 LYZL2Q7Z4W2 148 aa1.95□□□□□ -2.1
SMCHD1-213ENST00000609587 Q8N814 137 aa1.95□□□□□ -2.1
SMCHD1-213ENST00000609587 CLEC2BQ92478 149 aa1.95□□□□□ -2.1
SMCHD1-213ENST00000609587 S100A13Q99584 98 aa1.95□□□□□ -2.1
SMCHD1-213ENST00000609587 RETNLBQ9BQ08 111 aa1.95□□□□□ -2.1
SMCHD1-213ENST00000609587 USP54Q70EL1 1684 aa1.95□□□□□ -2.1
SMCHD1-213ENST00000609587 ADGRB3O60242 1522 aa1.95□□□□□ -2.1
SMCHD1-213ENST00000609587 MAGI3Q5TCQ9 1506 aa1.95□□□□□ -2.1
SMCHD1-213ENST00000609587 LMTK2Q8IWU2 1503 aa1.95□□□□□ -2.1
SMCHD1-213ENST00000609587 PTPRSQ13332 1948 aa1.95□□□□□ -2.1
SMCHD1-213ENST00000609587 STRCQ7RTU9 1775 aa1.95□□□□□ -2.1
SMCHD1-213ENST00000609587 HEATR5AQ86XA9 2040 aa1.95□□□□□ -2.1
SMCHD1-213ENST00000609587 WDR90Q96KV7 1748 aa1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 LAMC3Q9Y6N6 1575 aa1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 A0A1W2PQD3 144 aa1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 ZNF736B4DX44 427 aaPredicted RBP1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 PDCD5O14737 125 aa1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 PSCAO43653 123 aa1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 TIMM17BO60830 172 aa1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 SFT2D2O95562 160 aa1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 ZNF22P17026 224 aaPredicted RBP1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 NFYAP23511 347 aaPredicted RBP1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 FXYD2P54710 66 aa1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 PCBD1P61457 104 aa1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 C12orf73Q69YU5 71 aa1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 DPPA3Q6W0C5 159 aa1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 C5orf38Q86SI9 138 aa1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 OR2T35Q8NGX2 323 aa1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 VSTM2AQ8TAG5 236 aa1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 AQP3Q92482 292 aa1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 TSLPQ969D9 159 aa1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 CHCHD1Q96BP2 118 aaKnown RBP1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 IMMP2LQ96T52 175 aa1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 SLC50A1Q9BRV3 221 aa1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 SMCO4Q9NRQ5 59 aa1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 TMEM242Q9NWH2 141 aa1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 UQCR10Q9UDW1 63 aa1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 ARHGEF12Q9NZN5 1544 aa1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 CCDC88CQ9P219 2028 aa1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 TNRC6AQ8NDV7 1962 aaKnown RBP1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 MON2Q7Z3U7 1717 aa1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 COL5A1P20908 1838 aaPredicted RBP1.94□□□□□ -2.1
SMCHD1-213ENST00000609587 KIF21AQ7Z4S6 1674 aa1.93□□□□□ -2.1
SMCHD1-213ENST00000609587 PLXNA4Q9HCM2 1894 aa1.93□□□□□ -2.1
SMCHD1-213ENST00000609587 MYO5AQ9Y4I1 1855 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-213ENST00000609587 TRBV10-2A0A0K0K1G8 114 aa1.93□□□□□ -2.1
SMCHD1-213ENST00000609587 FAM24AA6NFZ4 105 aa1.93□□□□□ -2.1
SMCHD1-213ENST00000609587 APOC3P02656 99 aa1.93□□□□□ -2.1
SMCHD1-213ENST00000609587 GYPAP02724 150 aa1.93□□□□□ -2.1
SMCHD1-213ENST00000609587 PEBP1P30086 187 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-213ENST00000609587 SSR2P43308 183 aa1.93□□□□□ -2.1
SMCHD1-213ENST00000609587 ATP5EP56381 51 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-213ENST00000609587 CIRBPQ14011 172 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-213ENST00000609587 LYZL1Q6UWQ5 148 aa1.93□□□□□ -2.1
SMCHD1-213ENST00000609587 Q6ZQT0 140 aa1.93□□□□□ -2.1
SMCHD1-213ENST00000609587 LYPD6Q86Y78 171 aa1.93□□□□□ -2.1
SMCHD1-213ENST00000609587 LINC00269Q8N2A0 174 aa1.93□□□□□ -2.1
SMCHD1-213ENST00000609587 FAM19A2Q8N3H0 131 aa1.93□□□□□ -2.1
SMCHD1-213ENST00000609587 C15orf53Q8NAA6 179 aa1.93□□□□□ -2.1
SMCHD1-213ENST00000609587 TSKUQ8WUA8 353 aa1.93□□□□□ -2.1
SMCHD1-213ENST00000609587 ZCCHC13Q8WW36 166 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-213ENST00000609587 C20orf78Q9BR46 151 aa1.93□□□□□ -2.1
SMCHD1-213ENST00000609587 HIGD2AQ9BW72 106 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms