RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 CNFNQ9BYD5 112 aa4.58□□□□□ -1.68
TRAPPC1-204ENST00000571947 SIGLEC8Q9NYZ4 499 aa4.58□□□□□ -1.68
TRAPPC1-204ENST00000571947 TP53TG3Q9ULZ0 132 aa4.58□□□□□ -1.68
TRAPPC1-204ENST00000571947 NOTCH2Q04721 2471 aa4.58□□□□□ -1.68
TRAPPC1-204ENST00000571947 SETD2Q9BYW2 2564 aaPredicted RBP4.57□□□□□ -1.68
TRAPPC1-204ENST00000571947 A0A1B0GUS0 222 aa4.57□□□□□ -1.68
TRAPPC1-204ENST00000571947 OR4C46A6NHA9 309 aa4.57□□□□□ -1.68
TRAPPC1-204ENST00000571947 A8MTW9 85 aa4.57□□□□□ -1.68
TRAPPC1-204ENST00000571947 J3KRW8 73 aa4.57□□□□□ -1.68
TRAPPC1-204ENST00000571947 SNAI2O43623 268 aa4.57□□□□□ -1.68
TRAPPC1-204ENST00000571947 NUPR1O60356 82 aa4.57□□□□□ -1.68
TRAPPC1-204ENST00000571947 AMBPP02760 352 aa4.57□□□□□ -1.68
TRAPPC1-204ENST00000571947 OR5AL1P0C617 328 aa4.57□□□□□ -1.68
TRAPPC1-204ENST00000571947 SMIM6P0DI80 62 aa4.57□□□□□ -1.68
TRAPPC1-204ENST00000571947 MED14OSP0DP75 135 aa4.57□□□□□ -1.68
TRAPPC1-204ENST00000571947 FABP4P15090 132 aa4.57□□□□□ -1.68
TRAPPC1-204ENST00000571947 CD33P20138 364 aa4.57□□□□□ -1.68
TRAPPC1-204ENST00000571947 TSPOP30536 169 aa4.57□□□□□ -1.68
TRAPPC1-204ENST00000571947 RNASE4P34096 147 aaKnown RBP4.57□□□□□ -1.68
TRAPPC1-204ENST00000571947 LINC00310P59036 64 aa4.57□□□□□ -1.68
TRAPPC1-204ENST00000571947 KRTAP10-3P60369 221 aa4.57□□□□□ -1.68
TRAPPC1-204ENST00000571947 Q6ZQT7 251 aa4.57□□□□□ -1.68
TRAPPC1-204ENST00000571947 BAGE3Q86Y29 109 aa4.57□□□□□ -1.68
TRAPPC1-204ENST00000571947 NDUFA11Q86Y39 141 aa4.57□□□□□ -1.68
TRAPPC1-204ENST00000571947 OR10D4PQ8NGN7 298 aa4.57□□□□□ -1.68
TRAPPC1-204ENST00000571947 C18orf32Q8TCD1 76 aa4.57□□□□□ -1.68
TRAPPC1-204ENST00000571947 TMEM18Q96B42 140 aa4.57□□□□□ -1.68
TRAPPC1-204ENST00000571947 SPAG8Q99932 426 aaPredicted RBP4.57□□□□□ -1.68
TRAPPC1-204ENST00000571947 C2CD3Q4AC94 2353 aa4.57□□□□□ -1.68
TRAPPC1-204ENST00000571947 OTOGQ6ZRI0 2925 aa4.57□□□□□ -1.68
TRAPPC1-204ENST00000571947 IGHV4-4A0A075B6R2 117 aa4.56□□□□□ -1.68
TRAPPC1-204ENST00000571947 TMEM238LA0A1B0GVL6 79 aa4.56□□□□□ -1.68
TRAPPC1-204ENST00000571947 C7orf71A4D174 169 aa4.56□□□□□ -1.68
TRAPPC1-204ENST00000571947 SERF1AO75920 110 aa4.56□□□□□ -1.68
TRAPPC1-204ENST00000571947 HLA-DRB4P13762 266 aa4.56□□□□□ -1.68
TRAPPC1-204ENST00000571947 NTF3P20783 257 aa4.56□□□□□ -1.68
TRAPPC1-204ENST00000571947 DEFB131AP59861 70 aa4.56□□□□□ -1.68
TRAPPC1-204ENST00000571947 CACNG7P62955 275 aa4.56□□□□□ -1.68
TRAPPC1-204ENST00000571947 KIR3DS1Q14943 382 aa4.56□□□□□ -1.68
TRAPPC1-204ENST00000571947 TWIST1Q15672 202 aa4.56□□□□□ -1.68
TRAPPC1-204ENST00000571947 NSUN5P1Q3KNT7 163 aa4.56□□□□□ -1.68
TRAPPC1-204ENST00000571947 ANXA2RQ3ZCQ2 193 aa4.56□□□□□ -1.68
TRAPPC1-204ENST00000571947 CD300EQ496F6 205 aaPredicted RBP4.56□□□□□ -1.68
TRAPPC1-204ENST00000571947 FAM104BQ5XKR9 115 aa4.56□□□□□ -1.68
TRAPPC1-204ENST00000571947 AMTNQ6UX39 209 aa4.56□□□□□ -1.68
TRAPPC1-204ENST00000571947 PACRGQ96M98 296 aaPredicted RBP4.56□□□□□ -1.68
TRAPPC1-204ENST00000571947 TMEM191AQ9H0A3 160 aa4.56□□□□□ -1.68
TRAPPC1-204ENST00000571947 MAP6D1Q9H9H5 199 aa4.56□□□□□ -1.68
TRAPPC1-204ENST00000571947 ZNF256Q9Y2P7 627 aaPredicted RBP4.56□□□□□ -1.68
TRAPPC1-204ENST00000571947 HLA-DRB4X5D2U9 266 aa4.56□□□□□ -1.68
TRAPPC1-204ENST00000571947 F8P00451 2351 aa4.56□□□□□ -1.68
TRAPPC1-204ENST00000571947 MUC21A0A0G2JKD1 596 aa4.55□□□□□ -1.68
TRAPPC1-204ENST00000571947 MUC21A0A140T8X8 626 aa4.55□□□□□ -1.68
TRAPPC1-204ENST00000571947 KNCNA6PVL3 124 aa4.55□□□□□ -1.68
TRAPPC1-204ENST00000571947 H3BMM0 161 aa4.55□□□□□ -1.68
TRAPPC1-204ENST00000571947 H3BVH4 76 aa4.55□□□□□ -1.68
TRAPPC1-204ENST00000571947 ZNF324O75467 553 aaPredicted RBP4.55□□□□□ -1.68
TRAPPC1-204ENST00000571947 IGKV3-20P01619 116 aa4.55□□□□□ -1.68
TRAPPC1-204ENST00000571947 ASIPP42127 132 aa4.55□□□□□ -1.68
TRAPPC1-204ENST00000571947 CDKN1BP46527 198 aa4.55□□□□□ -1.68
TRAPPC1-204ENST00000571947 CMC4P56277 68 aaPredicted RBP4.55□□□□□ -1.68
TRAPPC1-204ENST00000571947 IQCJQ1A5X6 159 aa4.55□□□□□ -1.68
TRAPPC1-204ENST00000571947 MRPL51Q4U2R6 128 aaKnown RBP4.55□□□□□ -1.68
TRAPPC1-204ENST00000571947 PRR31Q5SQ13 230 aa4.55□□□□□ -1.68
TRAPPC1-204ENST00000571947 MUC21Q5SSG8 566 aa4.55□□□□□ -1.68
TRAPPC1-204ENST00000571947 OR2K2Q8NGT1 345 aa4.55□□□□□ -1.68
TRAPPC1-204ENST00000571947 KCNS1Q96KK3 526 aa4.55□□□□□ -1.68
TRAPPC1-204ENST00000571947 CLUHP3Q96NS8 147 aa4.55□□□□□ -1.68
TRAPPC1-204ENST00000571947 RCHY1Q96PM5 261 aa4.55□□□□□ -1.68
TRAPPC1-204ENST00000571947 C12orf57Q99622 126 aa4.55□□□□□ -1.68
TRAPPC1-204ENST00000571947 MSRB1Q9NZV6 116 aa4.55□□□□□ -1.68
TRAPPC1-204ENST00000571947 NAGKQ9UJ70 344 aa4.55□□□□□ -1.68
TRAPPC1-204ENST00000571947 U3KQK5 164 aa4.55□□□□□ -1.68
TRAPPC1-204ENST00000571947 TRAV12-3A0A0B4J271 114 aa4.54□□□□□ -1.68
TRAPPC1-204ENST00000571947 A6NJY4 79 aa4.54□□□□□ -1.68
TRAPPC1-204ENST00000571947 M0R2Z0 102 aa4.54□□□□□ -1.68
TRAPPC1-204ENST00000571947 GNRH2O43555 120 aa4.54□□□□□ -1.68
TRAPPC1-204ENST00000571947 IGLV1-51P01701 117 aa4.54□□□□□ -1.68
TRAPPC1-204ENST00000571947 RNASE3P12724 160 aaKnown RBP4.54□□□□□ -1.68
TRAPPC1-204ENST00000571947 RAB4AP20338 218 aa4.54□□□□□ -1.68
TRAPPC1-204ENST00000571947 S100A4P26447 101 aaKnown RBP4.54□□□□□ -1.68
TRAPPC1-204ENST00000571947 SSTP61278 116 aa4.54□□□□□ -1.68
TRAPPC1-204ENST00000571947 SPINK13Q1W4C9 94 aa4.54□□□□□ -1.68
TRAPPC1-204ENST00000571947 TDRG1Q3Y452 100 aa4.54□□□□□ -1.68
TRAPPC1-204ENST00000571947 FAM159AQ6UWV7 190 aa4.54□□□□□ -1.68
TRAPPC1-204ENST00000571947 NIT1Q86X76 327 aa4.54□□□□□ -1.68
TRAPPC1-204ENST00000571947 AMN1Q8IY45 258 aa4.54□□□□□ -1.68
TRAPPC1-204ENST00000571947 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.54□□□□□ -1.68
TRAPPC1-204ENST00000571947 OR10AG1Q8NH19 301 aa4.54□□□□□ -1.68
TRAPPC1-204ENST00000571947 RNF185Q96GF1 192 aa4.54□□□□□ -1.68
TRAPPC1-204ENST00000571947 URB1-AS1Q96HZ7 61 aa4.54□□□□□ -1.68
TRAPPC1-204ENST00000571947 SCRT2Q9NQ03 307 aa4.54□□□□□ -1.68
TRAPPC1-204ENST00000571947 BAHCC1Q9P281 2608 aa4.53□□□□□ -1.68
TRAPPC1-204ENST00000571947 TRAV12-2A0A075B6T6 113 aa4.53□□□□□ -1.68
TRAPPC1-204ENST00000571947 IGHV1OR15-1A0A075B7D0 117 aa4.53□□□□□ -1.68
TRAPPC1-204ENST00000571947 RBMY1BA6NDE4 496 aaKnown RBP4.53□□□□□ -1.68
TRAPPC1-204ENST00000571947 RBMY1EA6NEQ0 496 aaKnown RBP4.53□□□□□ -1.68
TRAPPC1-204ENST00000571947 CRXO43186 299 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC1-204ENST00000571947 SAP30O75446 220 aa4.53□□□□□ -1.68
TRAPPC1-204ENST00000571947 NXPH4O95158 308 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms