RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 APRG1Q8IVJ8 170 aa5.27□□□□□ -1.57
SF3A3-206ENST00000487062 ZFAND2AQ8N6M9 145 aa5.27□□□□□ -1.57
SF3A3-206ENST00000487062 FER1L6-AS1Q8NA97 138 aa5.27□□□□□ -1.57
SF3A3-206ENST00000487062 OR2K2Q8NGT1 345 aa5.27□□□□□ -1.57
SF3A3-206ENST00000487062 FAM19A4Q96LR4 140 aa5.27□□□□□ -1.57
SF3A3-206ENST00000487062 F2Z2F3 143 aa5.26□□□□□ -1.57
SF3A3-206ENST00000487062 SAP30O75446 220 aa5.26□□□□□ -1.57
SF3A3-206ENST00000487062 APCSP02743 223 aa5.26□□□□□ -1.57
SF3A3-206ENST00000487062 RNASE4P34096 147 aaKnown RBP5.26□□□□□ -1.57
SF3A3-206ENST00000487062 CAMPP49913 170 aa5.26□□□□□ -1.57
SF3A3-206ENST00000487062 DEFB131AP59861 70 aa5.26□□□□□ -1.57
SF3A3-206ENST00000487062 DEFB1P60022 68 aa5.26□□□□□ -1.57
SF3A3-206ENST00000487062 CD300EQ496F6 205 aaPredicted RBP5.26□□□□□ -1.57
SF3A3-206ENST00000487062 DNLZQ5SXM8 178 aa5.26□□□□□ -1.57
SF3A3-206ENST00000487062 LYZL1Q6UWQ5 148 aa5.26□□□□□ -1.57
SF3A3-206ENST00000487062 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.26□□□□□ -1.57
SF3A3-206ENST00000487062 TPPP3Q9BW30 176 aa5.26□□□□□ -1.57
SF3A3-206ENST00000487062 NOTCH2Q04721 2471 aa5.26□□□□□ -1.57
SF3A3-206ENST00000487062 MTORP42345 2549 aa5.25□□□□□ -1.57
SF3A3-206ENST00000487062 C7orf71A4D174 169 aa5.25□□□□□ -1.57
SF3A3-206ENST00000487062 GRIFINA4D1Z8 144 aa5.25□□□□□ -1.57
SF3A3-206ENST00000487062 KLLNB2CW77 178 aa5.25□□□□□ -1.57
SF3A3-206ENST00000487062 ARMS2P0C7Q2 107 aa5.25□□□□□ -1.57
SF3A3-206ENST00000487062 FRMD6-AS1P0C7T7 363 aa5.25□□□□□ -1.57
SF3A3-206ENST00000487062 IGLC6P0CF74 106 aa5.25□□□□□ -1.57
SF3A3-206ENST00000487062 HLA-DRB4P13762 266 aa5.25□□□□□ -1.57
SF3A3-206ENST00000487062 HOXA5P20719 270 aa5.25□□□□□ -1.57
SF3A3-206ENST00000487062 CTRLP40313 264 aa5.25□□□□□ -1.57
SF3A3-206ENST00000487062 CDKN1BP46527 198 aa5.25□□□□□ -1.57
SF3A3-206ENST00000487062 KRTAP10-3P60369 221 aa5.25□□□□□ -1.57
SF3A3-206ENST00000487062 PRR9Q5T870 116 aa5.25□□□□□ -1.57
SF3A3-206ENST00000487062 GDF5OSQ5U4N7 250 aa5.25□□□□□ -1.57
SF3A3-206ENST00000487062 GATD1Q8NB37 220 aa5.25□□□□□ -1.57
SF3A3-206ENST00000487062 KCNS1Q96KK3 526 aa5.25□□□□□ -1.57
SF3A3-206ENST00000487062 MAP6D1Q9H9H5 199 aa5.25□□□□□ -1.57
SF3A3-206ENST00000487062 HLA-DRB4X5D2U9 266 aa5.25□□□□□ -1.57
SF3A3-206ENST00000487062 HIVEP1P15822 2718 aa5.25□□□□□ -1.57
SF3A3-206ENST00000487062 NF1P21359 2839 aa5.24□□□□□ -1.57
SF3A3-206ENST00000487062 NSD1Q96L73 2696 aaPredicted RBP5.24□□□□□ -1.57
SF3A3-206ENST00000487062 IGKV3D-20A0A0C4DH25 116 aa5.24□□□□□ -1.57
SF3A3-206ENST00000487062 A8MTW9 85 aa5.24□□□□□ -1.57
SF3A3-206ENST00000487062 OR11H12B2RN74 326 aa5.24□□□□□ -1.57
SF3A3-206ENST00000487062 IGKV3-20P01619 116 aa5.24□□□□□ -1.57
SF3A3-206ENST00000487062 IGLV1-51P01701 117 aa5.24□□□□□ -1.57
SF3A3-206ENST00000487062 OR5AL1P0C617 328 aa5.24□□□□□ -1.57
SF3A3-206ENST00000487062 MED14OSP0DP75 135 aa5.24□□□□□ -1.57
SF3A3-206ENST00000487062 S100A4P26447 101 aaKnown RBP5.24□□□□□ -1.57
SF3A3-206ENST00000487062 S100A2P29034 98 aa5.24□□□□□ -1.57
SF3A3-206ENST00000487062 ASIPP42127 132 aa5.24□□□□□ -1.57
SF3A3-206ENST00000487062 CACNG7P62955 275 aa5.24□□□□□ -1.57
SF3A3-206ENST00000487062 COA6Q5JTJ3 125 aaKnown RBP5.24□□□□□ -1.57
SF3A3-206ENST00000487062 FAM159AQ6UWV7 190 aa5.24□□□□□ -1.57
SF3A3-206ENST00000487062 SMIM15Q7Z3B0 74 aa5.24□□□□□ -1.57
SF3A3-206ENST00000487062 C11orf21Q9P2W6 132 aa5.24□□□□□ -1.57
SF3A3-206ENST00000487062 NAGKQ9UJ70 344 aa5.24□□□□□ -1.57
SF3A3-206ENST00000487062 ZNF256Q9Y2P7 627 aaPredicted RBP5.24□□□□□ -1.57
SF3A3-206ENST00000487062 TRAV12-3A0A0B4J271 114 aa5.23□□□□□ -1.57
SF3A3-206ENST00000487062 KNCNA6PVL3 124 aa5.23□□□□□ -1.57
SF3A3-206ENST00000487062 H3BMM0 161 aa5.23□□□□□ -1.57
SF3A3-206ENST00000487062 WIPF1O43516 503 aa5.23□□□□□ -1.57
SF3A3-206ENST00000487062 SNAI2O43623 268 aa5.23□□□□□ -1.57
SF3A3-206ENST00000487062 AMBPP02760 352 aa5.23□□□□□ -1.57
SF3A3-206ENST00000487062 SRIP30626 198 aa5.23□□□□□ -1.57
SF3A3-206ENST00000487062 INSL3P51460 131 aa5.23□□□□□ -1.57
SF3A3-206ENST00000487062 Q0VG73 95 aa5.23□□□□□ -1.57
SF3A3-206ENST00000487062 SLAQ13239 276 aa5.23□□□□□ -1.57
SF3A3-206ENST00000487062 TWIST1Q15672 202 aa5.23□□□□□ -1.57
SF3A3-206ENST00000487062 SPINK13Q1W4C9 94 aa5.23□□□□□ -1.57
SF3A3-206ENST00000487062 KIAA1644Q3SXP7 199 aa5.23□□□□□ -1.57
SF3A3-206ENST00000487062 ANXA2RQ3ZCQ2 193 aa5.23□□□□□ -1.57
SF3A3-206ENST00000487062 OR10J3Q5JRS4 329 aa5.23□□□□□ -1.57
SF3A3-206ENST00000487062 ZNF493Q6ZR52 646 aa5.23□□□□□ -1.57
SF3A3-206ENST00000487062 BAGE3Q86Y29 109 aa5.23□□□□□ -1.57
SF3A3-206ENST00000487062 STHQ8IWL8 128 aa5.23□□□□□ -1.57
SF3A3-206ENST00000487062 LINC00482Q8N8I6 264 aa5.23□□□□□ -1.57
SF3A3-206ENST00000487062 CITED1Q99966 193 aa5.23□□□□□ -1.57
SF3A3-206ENST00000487062 FAM110AQ9BQ89 295 aa5.23□□□□□ -1.57
SF3A3-206ENST00000487062 CNFNQ9BYD5 112 aa5.23□□□□□ -1.57
SF3A3-206ENST00000487062 NIT2Q9NQR4 276 aa5.23□□□□□ -1.57
SF3A3-206ENST00000487062 GSN-AS1Q9NRJ2 163 aa5.23□□□□□ -1.57
SF3A3-206ENST00000487062 FN1P02751 2386 aaKnown RBP5.23□□□□□ -1.57
SF3A3-206ENST00000487062 LOC102724200A0A096LPH7 203 aaPredicted RBP5.22□□□□□ -1.57
SF3A3-206ENST00000487062 M0R2Z0 102 aa5.22□□□□□ -1.57
SF3A3-206ENST00000487062 NTF3P20783 257 aa5.22□□□□□ -1.57
SF3A3-206ENST00000487062 MUC21Q5SSG8 566 aa5.22□□□□□ -1.57
SF3A3-206ENST00000487062 C9orf66Q5T8R8 295 aa5.22□□□□□ -1.57
SF3A3-206ENST00000487062 SPANXN1Q5VSR9 72 aa5.22□□□□□ -1.57
SF3A3-206ENST00000487062 GFI1BQ5VTD9 330 aa5.22□□□□□ -1.57
SF3A3-206ENST00000487062 AMTNQ6UX39 209 aa5.22□□□□□ -1.57
SF3A3-206ENST00000487062 HIST3H2BBQ8N257 126 aa5.22□□□□□ -1.57
SF3A3-206ENST00000487062 LINC00469Q8N7U9 141 aa5.22□□□□□ -1.57
SF3A3-206ENST00000487062 C20orf144Q9BQM9 153 aa5.22□□□□□ -1.57
SF3A3-206ENST00000487062 MCRIP2Q9BUT9 160 aaKnown RBP5.22□□□□□ -1.57
SF3A3-206ENST00000487062 TMEM191AQ9H0A3 160 aa5.22□□□□□ -1.57
SF3A3-206ENST00000487062 AGRNO00468 2067 aa5.21□□□□□ -1.58
SF3A3-206ENST00000487062 TRGV11A0A075B6L2 103 aa5.21□□□□□ -1.58
SF3A3-206ENST00000487062 IGHV4-4A0A075B6R2 117 aa5.21□□□□□ -1.58
SF3A3-206ENST00000487062 TRAV12-2A0A075B6T6 113 aa5.21□□□□□ -1.58
SF3A3-206ENST00000487062 IGHV1OR15-1A0A075B7D0 117 aa5.21□□□□□ -1.58
SF3A3-206ENST00000487062 H3BVH4 76 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms