RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 GTSF1Q8WW33 167 aa8.18□□□□□ -1.1
COL12A1-207ENST00000483888 VPREB1P12018 145 aa8.18□□□□□ -1.1
COL12A1-207ENST00000483888 LOXL1Q08397 574 aaPredicted RBP8.18□□□□□ -1.1
COL12A1-207ENST00000483888 DYNAPQ8N1N2 210 aa8.18□□□□□ -1.1
COL12A1-207ENST00000483888 MLST8Q9BVC4 326 aa8.18□□□□□ -1.1
COL12A1-207ENST00000483888 Q9H8V8 135 aa8.18□□□□□ -1.1
COL12A1-207ENST00000483888 CSDC2Q9Y534 153 aaKnown RBP8.18□□□□□ -1.1
COL12A1-207ENST00000483888 NDUFA11Q86Y39 141 aa8.18□□□□□ -1.1
COL12A1-207ENST00000483888 TIMM17BO60830 172 aa8.18□□□□□ -1.1
COL12A1-207ENST00000483888 CCL21O00585 134 aa8.17□□□□□ -1.1
COL12A1-207ENST00000483888 ATP5EP56381 51 aaPredicted RBP8.17□□□□□ -1.1
COL12A1-207ENST00000483888 VSIG2Q96IQ7 327 aa8.17□□□□□ -1.1
COL12A1-207ENST00000483888 COL18A1P39060 1754 aa8.17□□□□□ -1.1
COL12A1-207ENST00000483888 IGKV1-6A0A0C4DH72 117 aa8.17□□□□□ -1.1
COL12A1-207ENST00000483888 TRAV4A0A0B4J268 109 aa8.17□□□□□ -1.1
COL12A1-207ENST00000483888 E9PLD3 99 aa8.17□□□□□ -1.1
COL12A1-207ENST00000483888 COX7B2Q8TF08 81 aa8.17□□□□□ -1.1
COL12A1-207ENST00000483888 IL15RAQ13261 267 aa8.16□□□□□ -1.1
COL12A1-207ENST00000483888 COLCA1Q6ZS62 124 aa8.16□□□□□ -1.1
COL12A1-207ENST00000483888 METRNQ9UJH8 293 aa8.16□□□□□ -1.1
COL12A1-207ENST00000483888 SIGLEC9Q9Y336 463 aa8.16□□□□□ -1.1
COL12A1-207ENST00000483888 RBAKDNA6NC62 111 aa8.16□□□□□ -1.1
COL12A1-207ENST00000483888 ELANEP08246 267 aa8.16□□□□□ -1.1
COL12A1-207ENST00000483888 BSPH1Q075Z2 132 aa8.16□□□□□ -1.1
COL12A1-207ENST00000483888 FAM19A5Q7Z5A7 132 aaPredicted RBP8.16□□□□□ -1.1
COL12A1-207ENST00000483888 FANCD2OSQ96PS1 177 aa8.16□□□□□ -1.1
COL12A1-207ENST00000483888 IGHV1-3A0A0C4DH29 117 aa8.16□□□□□ -1.1
COL12A1-207ENST00000483888 H0YGX0 51 aa8.16□□□□□ -1.1
COL12A1-207ENST00000483888 TMEM200BQ69YZ2 307 aa8.16□□□□□ -1.1
COL12A1-207ENST00000483888 CD177Q8N6Q3 437 aa8.16□□□□□ -1.1
COL12A1-207ENST00000483888 PAPPA2Q9BXP8 1791 aa8.16□□□□□ -1.1
COL12A1-207ENST00000483888 IGHV4-28A0A0C4DH34 117 aa8.16□□□□□ -1.1
COL12A1-207ENST00000483888 SLC25A45Q8N413 288 aa8.16□□□□□ -1.1
COL12A1-207ENST00000483888 TMEM14CQ9P0S9 112 aa8.16□□□□□ -1.1
COL12A1-207ENST00000483888 C17orf100A8MU93 164 aa8.15□□□□□ -1.1
COL12A1-207ENST00000483888 DEFB105AQ8NG35 78 aa8.15□□□□□ -1.1
COL12A1-207ENST00000483888 ODF1Q14990 250 aa8.15□□□□□ -1.1
COL12A1-207ENST00000483888 THAP8Q8NA92 274 aa8.15□□□□□ -1.1
COL12A1-207ENST00000483888 IGHV3-16A0A0C4DH30 117 aa8.15□□□□□ -1.11
COL12A1-207ENST00000483888 NKAPP1Q8N9T2 125 aa8.15□□□□□ -1.11
COL12A1-207ENST00000483888 VPREB3Q9UKI3 123 aa8.15□□□□□ -1.11
COL12A1-207ENST00000483888 PF4P02776 101 aa8.15□□□□□ -1.11
COL12A1-207ENST00000483888 TP73-AS1Q9UF72 201 aa8.15□□□□□ -1.11
COL12A1-207ENST00000483888 PROP1O75360 226 aa8.15□□□□□ -1.11
COL12A1-207ENST00000483888 Q6ZR03 302 aa8.15□□□□□ -1.11
COL12A1-207ENST00000483888 PRRC2AP48634 2157 aaKnown RBP8.15□□□□□ -1.11
COL12A1-207ENST00000483888 ATG2AQ2TAZ0 1938 aa8.14□□□□□ -1.11
COL12A1-207ENST00000483888 IGHV3-38A0A0C4DH36 116 aa8.14□□□□□ -1.11
COL12A1-207ENST00000483888 GATA1P15976 413 aaPredicted RBP8.14□□□□□ -1.11
COL12A1-207ENST00000483888 PIFOQ8TCI5 191 aa8.14□□□□□ -1.11
COL12A1-207ENST00000483888 JMJD7-PLA2G4BH0Y9G9 81 aa8.14□□□□□ -1.11
COL12A1-207ENST00000483888 IGKV1-39P01597 117 aa8.14□□□□□ -1.11
COL12A1-207ENST00000483888 IGKV1D-39P04432 117 aa8.14□□□□□ -1.11
COL12A1-207ENST00000483888 RHOHQ15669 191 aa8.14□□□□□ -1.11
COL12A1-207ENST00000483888 NREPQ16612 68 aa8.14□□□□□ -1.11
COL12A1-207ENST00000483888 UBE2E2Q96LR5 201 aa8.14□□□□□ -1.11
COL12A1-207ENST00000483888 MSRB2Q9Y3D2 182 aa8.14□□□□□ -1.11
COL12A1-207ENST00000483888 NDUFA4L2Q9NRX3 87 aa8.14□□□□□ -1.11
COL12A1-207ENST00000483888 KIAA1671Q9BY89 1806 aa8.14□□□□□ -1.11
COL12A1-207ENST00000483888 TNS1Q9HBL0 1735 aaKnown RBP8.14□□□□□ -1.11
COL12A1-207ENST00000483888 C2orf16Q68DN1 1984 aa8.14□□□□□ -1.11
COL12A1-207ENST00000483888 CEP192Q8TEP8 1941 aa8.13□□□□□ -1.11
COL12A1-207ENST00000483888 C2orf70A6NJV1 201 aa8.13□□□□□ -1.11
COL12A1-207ENST00000483888 COX7CP15954 63 aa8.13□□□□□ -1.11
COL12A1-207ENST00000483888 PTPRBP23467 1997 aa8.13□□□□□ -1.11
COL12A1-207ENST00000483888 SHISA2Q6UWI4 295 aa8.13□□□□□ -1.11
COL12A1-207ENST00000483888 SERP2Q8N6R1 65 aa8.13□□□□□ -1.11
COL12A1-207ENST00000483888 DAND5Q8N907 189 aa8.13□□□□□ -1.11
COL12A1-207ENST00000483888 SRRM5B3KS81 715 aa8.13□□□□□ -1.11
COL12A1-207ENST00000483888 TRIP6Q15654 476 aaKnown RBP8.13□□□□□ -1.11
COL12A1-207ENST00000483888 XGP55808 180 aa8.13□□□□□ -1.11
COL12A1-207ENST00000483888 IMUPQ9GZP8 106 aa8.13□□□□□ -1.11
COL12A1-207ENST00000483888 NDUFC1O43677 76 aa8.13□□□□□ -1.11
COL12A1-207ENST00000483888 WI2-2373I1.2A0A1W2PRP0 233 aa8.12□□□□□ -1.11
COL12A1-207ENST00000483888 A0A1W2PRX2 142 aa8.12□□□□□ -1.11
COL12A1-207ENST00000483888 IGHV1-8P0DP01 117 aa8.12□□□□□ -1.11
COL12A1-207ENST00000483888 CTRLP40313 264 aa8.12□□□□□ -1.11
COL12A1-207ENST00000483888 COL5A3P25940 1745 aaPredicted RBP8.12□□□□□ -1.11
COL12A1-207ENST00000483888 IGF2BP2-AS1Q96M15 143 aa8.12□□□□□ -1.11
COL12A1-207ENST00000483888 DEFB124Q8NES8 71 aa8.12□□□□□ -1.11
COL12A1-207ENST00000483888 RPL39LQ96EH5 51 aaKnown RBP8.12□□□□□ -1.11
COL12A1-207ENST00000483888 PMAIP1Q13794 54 aa8.12□□□□□ -1.11
COL12A1-207ENST00000483888 SND1-IT1Q9HBX3 110 aa8.12□□□□□ -1.11
COL12A1-207ENST00000483888 A6NED7 52 aa8.11□□□□□ -1.11
COL12A1-207ENST00000483888 OOSP1A8MZH6 123 aa8.11□□□□□ -1.11
COL12A1-207ENST00000483888 E9PLN8 166 aa8.11□□□□□ -1.11
COL12A1-207ENST00000483888 H3BRN7 92 aa8.11□□□□□ -1.11
COL12A1-207ENST00000483888 KLK9Q9UKQ9 250 aa8.11□□□□□ -1.11
COL12A1-207ENST00000483888 H3BQ85 93 aa8.11□□□□□ -1.11
COL12A1-207ENST00000483888 TMEM256-PLSCR3K7ERE1 68 aa8.11□□□□□ -1.11
COL12A1-207ENST00000483888 SEC61GP60059 68 aa8.11□□□□□ -1.11
COL12A1-207ENST00000483888 FRMD6-AS1P0C7T7 363 aa8.11□□□□□ -1.11
COL12A1-207ENST00000483888 LMO1P25800 156 aa8.11□□□□□ -1.11
COL12A1-207ENST00000483888 ZNF561-AS1K7EIQ3 104 aa8.11□□□□□ -1.11
COL12A1-207ENST00000483888 SHANK3Q9BYB0 1731 aa8.11□□□□□ -1.11
COL12A1-207ENST00000483888 IGHV4-4A0A075B6R2 117 aa8.11□□□□□ -1.11
COL12A1-207ENST00000483888 IGLV3-32A0A0A0MS00 114 aa8.11□□□□□ -1.11
COL12A1-207ENST00000483888 SNURFQ9Y675 71 aa8.11□□□□□ -1.11
COL12A1-207ENST00000483888 TEX36Q5VZQ5 186 aa8.1□□□□□ -1.11
COL12A1-207ENST00000483888 ZNF503Q96F45 646 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms