RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 GCC2Q8IWJ2 1684 aa1.83□□□□□ -2.12
MCF2-207ENST00000483690 C10orf71Q711Q0 1435 aa1.83□□□□□ -2.12
MCF2-207ENST00000483690 VIRMAQ69YN4 1812 aaKnown RBP1.83□□□□□ -2.12
MCF2-207ENST00000483690 SCGB1A1P11684 91 aa1.83□□□□□ -2.12
MCF2-207ENST00000483690 CIRBPQ14011 172 aaKnown RBP1.83□□□□□ -2.12
MCF2-207ENST00000483690 WHAMMP3Q1A5X7 153 aa1.83□□□□□ -2.12
MCF2-207ENST00000483690 PRR15Q8IV56 129 aa1.83□□□□□ -2.12
MCF2-207ENST00000483690 TSC22D3Q99576 134 aa1.83□□□□□ -2.12
MCF2-207ENST00000483690 NDUFAF1Q9Y375 327 aa1.83□□□□□ -2.12
MCF2-207ENST00000483690 USP32Q8NFA0 1604 aa1.83□□□□□ -2.12
MCF2-207ENST00000483690 PIK3C2AO00443 1686 aa1.83□□□□□ -2.12
MCF2-207ENST00000483690 GOLGB1Q14789 3259 aaKnown RBP1.83□□□□□ -2.12
MCF2-207ENST00000483690 CLTCL1P53675 1640 aa1.82□□□□□ -2.12
MCF2-207ENST00000483690 PVALEFA0A1B0GWK0 134 aa1.82□□□□□ -2.12
MCF2-207ENST00000483690 LINC00587B1AMM8 73 aa1.82□□□□□ -2.12
MCF2-207ENST00000483690 ATP6V1G2-DDX39BF2Z307 99 aa1.82□□□□□ -2.12
MCF2-207ENST00000483690 PFDN1O60925 122 aa1.82□□□□□ -2.12
MCF2-207ENST00000483690 IFNA21P01568 189 aa1.82□□□□□ -2.12
MCF2-207ENST00000483690 PSPHP78330 225 aa1.82□□□□□ -2.12
MCF2-207ENST00000483690 DEFB123Q8N688 67 aa1.82□□□□□ -2.12
MCF2-207ENST00000483690 ISOC1Q96CN7 298 aa1.82□□□□□ -2.12
MCF2-207ENST00000483690 IBTKQ9P2D0 1353 aaPredicted RBP1.82□□□□□ -2.12
MCF2-207ENST00000483690 HFM1A2PYH4 1435 aa1.82□□□□□ -2.12
MCF2-207ENST00000483690 PDE4DIPQ5VU43 2346 aa1.82□□□□□ -2.12
MCF2-207ENST00000483690 CICQ96RK0 1608 aaPredicted RBP1.81□□□□□ -2.12
MCF2-207ENST00000483690 COL24A1Q17RW2 1714 aa1.81□□□□□ -2.12
MCF2-207ENST00000483690 XRN1Q8IZH2 1706 aaKnown RBP1.81□□□□□ -2.12
MCF2-207ENST00000483690 S100PP25815 95 aa1.81□□□□□ -2.12
MCF2-207ENST00000483690 RPL13AP3Q6NVV1 102 aa1.81□□□□□ -2.12
MCF2-207ENST00000483690 ZC2HC1AQ96GY0 325 aa1.81□□□□□ -2.12
MCF2-207ENST00000483690 AIF1LQ9BQI0 150 aa1.81□□□□□ -2.12
MCF2-207ENST00000483690 C2orf88Q9BSF0 95 aa1.81□□□□□ -2.12
MCF2-207ENST00000483690 NAT8BQ9UHF3 227 aa1.81□□□□□ -2.12
MCF2-207ENST00000483690 SPEF2Q9C093 1822 aa1.81□□□□□ -2.12
MCF2-207ENST00000483690 NAIPQ13075 1403 aa1.81□□□□□ -2.12
MCF2-207ENST00000483690 LAMC1P11047 1609 aa1.8□□□□□ -2.12
MCF2-207ENST00000483690 IQGAP3Q86VI3 1631 aa1.8□□□□□ -2.12
MCF2-207ENST00000483690 NALCNQ8IZF0 1738 aa1.8□□□□□ -2.12
MCF2-207ENST00000483690 NWD2Q9ULI1 1742 aa1.8□□□□□ -2.12
MCF2-207ENST00000483690 C9orf170A2RU37 121 aa1.8□□□□□ -2.12
MCF2-207ENST00000483690 C5orf67F2Z3F1 127 aa1.8□□□□□ -2.12
MCF2-207ENST00000483690 TSTD3H0UI37 97 aa1.8□□□□□ -2.12
MCF2-207ENST00000483690 KPNA4O00629 521 aaPredicted RBP1.8□□□□□ -2.12
MCF2-207ENST00000483690 ARPC5O15511 151 aa1.8□□□□□ -2.12
MCF2-207ENST00000483690 MT-ND6P03923 174 aa1.8□□□□□ -2.12
MCF2-207ENST00000483690 COX4I1P13073 169 aa1.8□□□□□ -2.12
MCF2-207ENST00000483690 PRB3Q04118 309 aaPredicted RBP1.8□□□□□ -2.12
MCF2-207ENST00000483690 TMEM78Q5T7P6 136 aa1.8□□□□□ -2.12
MCF2-207ENST00000483690 C12orf57Q99622 126 aa1.8□□□□□ -2.12
MCF2-207ENST00000483690 BCL9O00512 1426 aa1.8□□□□□ -2.12
MCF2-207ENST00000483690 ATP7BP35670 1465 aa1.8□□□□□ -2.12
MCF2-207ENST00000483690 PHRF1Q9P1Y6 1649 aaKnown RBP1.8□□□□□ -2.12
MCF2-207ENST00000483690 PLCH1Q4KWH8 1693 aa1.8□□□□□ -2.12
MCF2-207ENST00000483690 MARF1Q9Y4F3 1742 aaKnown RBP1.8□□□□□ -2.12
MCF2-207ENST00000483690 TRDV1A0A1B0GX56 115 aa1.79□□□□□ -2.12
MCF2-207ENST00000483690 K7EP13 123 aa1.79□□□□□ -2.12
MCF2-207ENST00000483690 SULT1C4O75897 302 aa1.79□□□□□ -2.12
MCF2-207ENST00000483690 IFNGP01579 166 aa1.79□□□□□ -2.12
MCF2-207ENST00000483690 SMIM6P0DI80 62 aa1.79□□□□□ -2.12
MCF2-207ENST00000483690 EFNA4P52798 201 aa1.79□□□□□ -2.12
MCF2-207ENST00000483690 GNG2P59768 71 aa1.79□□□□□ -2.12
MCF2-207ENST00000483690 CCDC32Q9BV29 185 aa1.79□□□□□ -2.12
MCF2-207ENST00000483690 COL1A1P02452 1464 aaPredicted RBP1.79□□□□□ -2.12
MCF2-207ENST00000483690 RGPD8O14715 1765 aaPredicted RBP1.79□□□□□ -2.12
MCF2-207ENST00000483690 COL14A1Q05707 1796 aaKnown RBP1.79□□□□□ -2.12
MCF2-207ENST00000483690 LAMA4Q16363 1823 aa1.79□□□□□ -2.12
MCF2-207ENST00000483690 CACNA1AO00555 2505 aa1.79□□□□□ -2.12
MCF2-207ENST00000483690 MED12Q93074 2177 aa1.78□□□□□ -2.12
MCF2-207ENST00000483690 PPLO60437 1756 aa1.78□□□□□ -2.12
MCF2-207ENST00000483690 A0A1B0GV90 55 aa1.78□□□□□ -2.12
MCF2-207ENST00000483690 ANGPTL5Q86XS5 388 aa1.78□□□□□ -2.12
MCF2-207ENST00000483690 MCEEQ96PE7 176 aa1.78□□□□□ -2.12
MCF2-207ENST00000483690 PFDN5Q99471 154 aa1.78□□□□□ -2.12
MCF2-207ENST00000483690 LRTM1Q9HBL6 345 aa1.78□□□□□ -2.12
MCF2-207ENST00000483690 SPANXA1Q9NS26 97 aa1.78□□□□□ -2.12
MCF2-207ENST00000483690 FAIMQ9NVQ4 179 aa1.78□□□□□ -2.12
MCF2-207ENST00000483690 COA4Q9NYJ1 87 aa1.78□□□□□ -2.12
MCF2-207ENST00000483690 GSKIPQ9P0R6 139 aa1.78□□□□□ -2.12
MCF2-207ENST00000483690 PCNTO95613 3336 aa1.78□□□□□ -2.13
MCF2-207ENST00000483690 NRAPQ86VF7 1730 aa1.77□□□□□ -2.13
MCF2-207ENST00000483690 ABCA3Q99758 1704 aa1.77□□□□□ -2.13
MCF2-207ENST00000483690 TOPAZ1Q8N9V7 1692 aa1.77□□□□□ -2.13
MCF2-207ENST00000483690 SMG6Q86US8 1419 aaKnown RBP1.77□□□□□ -2.13
MCF2-207ENST00000483690 A0A096LPI6 279 aa1.77□□□□□ -2.13
MCF2-207ENST00000483690 FAM25AB3EWG3 89 aa1.77□□□□□ -2.13
MCF2-207ENST00000483690 FAM25CB3EWG5 89 aa1.77□□□□□ -2.13
MCF2-207ENST00000483690 FAM25GB3EWG6 89 aa1.77□□□□□ -2.13
MCF2-207ENST00000483690 TNRC18O15417 2968 aaPredicted RBP1.77□□□□□ -2.13
MCF2-207ENST00000483690 DLEU1O43261 78 aa1.77□□□□□ -2.13
MCF2-207ENST00000483690 S100A8P05109 93 aa1.77□□□□□ -2.13
MCF2-207ENST00000483690 SDC4P31431 198 aa1.77□□□□□ -2.13
MCF2-207ENST00000483690 OR8J3Q8NGG0 315 aa1.77□□□□□ -2.13
MCF2-207ENST00000483690 C1orf54Q8WWF1 131 aa1.77□□□□□ -2.13
MCF2-207ENST00000483690 PSMF1Q92530 271 aa1.77□□□□□ -2.13
MCF2-207ENST00000483690 TMEM203Q969S6 136 aa1.77□□□□□ -2.13
MCF2-207ENST00000483690 TCEAL7Q9BRU2 100 aa1.77□□□□□ -2.13
MCF2-207ENST00000483690 TPT1P8Q9HAU6 139 aa1.77□□□□□ -2.13
MCF2-207ENST00000483690 LAMTOR2Q9Y2Q5 125 aa1.77□□□□□ -2.13
MCF2-207ENST00000483690 HSPB11Q9Y547 144 aa1.77□□□□□ -2.13
MCF2-207ENST00000483690 FMN2Q9NZ56 1722 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms