RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 IGHV3-11P01762 117 aa9.55□□□□□ -0.88
RNF220-211ENST00000474956 H3BUX3 64 aa9.55□□□□□ -0.88
RNF220-211ENST00000474956 SRSF2Q01130 221 aaKnown RBP9.55□□□□□ -0.88
RNF220-211ENST00000474956 PIMREGQ9BSJ6 248 aa9.55□□□□□ -0.88
RNF220-211ENST00000474956 SPCS1Q9Y6A9 102 aa9.55□□□□□ -0.88
RNF220-211ENST00000474956 LINC01546A6NGU7 62 aa9.54□□□□□ -0.88
RNF220-211ENST00000474956 NEGR1Q7Z3B1 354 aa9.54□□□□□ -0.88
RNF220-211ENST00000474956 ZNF575Q86XF7 245 aa9.54□□□□□ -0.88
RNF220-211ENST00000474956 KLK15Q9H2R5 256 aa9.54□□□□□ -0.88
RNF220-211ENST00000474956 SORL1Q92673 2214 aa9.54□□□□□ -0.88
RNF220-211ENST00000474956 PRSS57Q6UWY2 283 aa9.54□□□□□ -0.88
RNF220-211ENST00000474956 EDN2P20800 178 aa9.54□□□□□ -0.88
RNF220-211ENST00000474956 UNQ9165/PRO28630Q6UXU0 137 aa9.54□□□□□ -0.88
RNF220-211ENST00000474956 WFDC3Q8IUB2 231 aa9.54□□□□□ -0.88
RNF220-211ENST00000474956 C18orf15Q96N68 181 aa9.54□□□□□ -0.88
RNF220-211ENST00000474956 CNFNQ9BYD5 112 aa9.54□□□□□ -0.88
RNF220-211ENST00000474956 NXT2Q9NPJ8 142 aaKnown RBP9.54□□□□□ -0.88
RNF220-211ENST00000474956 HIGD1BQ9P298 99 aa9.54□□□□□ -0.88
RNF220-211ENST00000474956 BUB3O43684 328 aa9.53□□□□□ -0.88
RNF220-211ENST00000474956 SMIM13P0DJ93 91 aa9.53□□□□□ -0.88
RNF220-211ENST00000474956 FABP2P12104 132 aa9.53□□□□□ -0.88
RNF220-211ENST00000474956 FCER1GP30273 86 aa9.53□□□□□ -0.88
RNF220-211ENST00000474956 LINC01559Q495D7 138 aa9.53□□□□□ -0.88
RNF220-211ENST00000474956 RNF185Q96GF1 192 aa9.53□□□□□ -0.88
RNF220-211ENST00000474956 NIPBLQ6KC79 2804 aaeCLIP9.53□□□□□ -0.88
RNF220-211ENST00000474956 PPIFP30405 207 aaKnown RBP9.53□□□□□ -0.88
RNF220-211ENST00000474956 CLEC2AQ6UVW9 174 aa9.53□□□□□ -0.88
RNF220-211ENST00000474956 ZMAT4Q9H898 229 aa9.53□□□□□ -0.88
RNF220-211ENST00000474956 SCGB2A1O75556 95 aa9.53□□□□□ -0.88
RNF220-211ENST00000474956 ORM1P02763 201 aa9.53□□□□□ -0.88
RNF220-211ENST00000474956 LEPP41159 167 aa9.53□□□□□ -0.88
RNF220-211ENST00000474956 RIPPLY3P57055 190 aa9.53□□□□□ -0.88
RNF220-211ENST00000474956 SRSF1Q07955 248 aaKnown RBP eCLIP9.53□□□□□ -0.88
RNF220-211ENST00000474956 ODF1Q14990 250 aa9.53□□□□□ -0.88
RNF220-211ENST00000474956 HIF1ANQ9NWT6 349 aa9.53□□□□□ -0.88
RNF220-211ENST00000474956 TRAV41A0A0B4J266 112 aa9.52□□□□□ -0.89
RNF220-211ENST00000474956 FABP5P3A8MUU1 101 aa9.52□□□□□ -0.89
RNF220-211ENST00000474956 C10orf99Q6UWK7 81 aa9.52□□□□□ -0.89
RNF220-211ENST00000474956 MSRB1Q9NZV6 116 aa9.52□□□□□ -0.89
RNF220-211ENST00000474956 IGKV3-7A0A075B6H7 116 aa9.52□□□□□ -0.89
RNF220-211ENST00000474956 KRTAP10-9P60411 292 aa9.52□□□□□ -0.89
RNF220-211ENST00000474956 SAMD5Q5TGI4 173 aa9.52□□□□□ -0.89
RNF220-211ENST00000474956 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.52□□□□□ -0.89
RNF220-211ENST00000474956 HHLA3Q9XRX5 114 aa9.52□□□□□ -0.89
RNF220-211ENST00000474956 AKAP9Q99996 3911 aa9.52□□□□□ -0.89
RNF220-211ENST00000474956 TNFRSF6BO95407 300 aa9.51□□□□□ -0.89
RNF220-211ENST00000474956 TRGV3P03979 118 aa9.51□□□□□ -0.89
RNF220-211ENST00000474956 PRSS1P07477 247 aa9.51□□□□□ -0.89
RNF220-211ENST00000474956 S100A7P31151 101 aa9.51□□□□□ -0.89
RNF220-211ENST00000474956 MOB4Q9Y3A3 225 aa9.51□□□□□ -0.89
RNF220-211ENST00000474956 SMIM17P0DL12 118 aa9.51□□□□□ -0.89
RNF220-211ENST00000474956 GCSHP23434 173 aa9.51□□□□□ -0.89
RNF220-211ENST00000474956 IL17RELQ6ZVW7 336 aa9.51□□□□□ -0.89
RNF220-211ENST00000474956 SMPXQ9UHP9 88 aa9.51□□□□□ -0.89
RNF220-211ENST00000474956 J3KRW8 73 aa9.51□□□□□ -0.89
RNF220-211ENST00000474956 SPRY2O43597 315 aa9.51□□□□□ -0.89
RNF220-211ENST00000474956 IGKCP01834 107 aa9.51□□□□□ -0.89
RNF220-211ENST00000474956 ITPR3Q14573 2671 aa9.51□□□□□ -0.89
RNF220-211ENST00000474956 IGKV2D-26A0A0A0MRZ7 120 aa9.5□□□□□ -0.89
RNF220-211ENST00000474956 TRAV8-2A0A0B4J237 113 aa9.5□□□□□ -0.89
RNF220-211ENST00000474956 GAS8-AS1O95177 125 aa9.5□□□□□ -0.89
RNF220-211ENST00000474956 IGF1P05019 195 aa9.5□□□□□ -0.89
RNF220-211ENST00000474956 EVI2AP22794 236 aa9.5□□□□□ -0.89
RNF220-211ENST00000474956 TM4SF20Q53R12 229 aa9.5□□□□□ -0.89
RNF220-211ENST00000474956 ATP5LO75964 103 aa9.5□□□□□ -0.89
RNF220-211ENST00000474956 MSMBP08118 114 aa9.5□□□□□ -0.89
RNF220-211ENST00000474956 CHAC1Q9BUX1 264 aa9.5□□□□□ -0.89
RNF220-211ENST00000474956 FXYD2P54710 66 aa9.49□□□□□ -0.89
RNF220-211ENST00000474956 C19orf54Q5BKX5 351 aa9.49□□□□□ -0.89
RNF220-211ENST00000474956 ATP5G2Q06055 141 aa9.49□□□□□ -0.89
RNF220-211ENST00000474956 EEF1AKMT3Q96AZ1 226 aa9.49□□□□□ -0.89
RNF220-211ENST00000474956 PSMG3-AS1Q96PY0 264 aa9.49□□□□□ -0.89
RNF220-211ENST00000474956 TMEM238C9JI98 176 aa9.49□□□□□ -0.89
RNF220-211ENST00000474956 DPM2O94777 84 aa9.49□□□□□ -0.89
RNF220-211ENST00000474956 HIST2H2BDQ6DRA6 164 aa9.49□□□□□ -0.89
RNF220-211ENST00000474956 ACANP16112 2415 aa9.49□□□□□ -0.89
RNF220-211ENST00000474956 SRD5A1P18405 259 aa9.48□□□□□ -0.89
RNF220-211ENST00000474956 Q8N8P6 123 aa9.48□□□□□ -0.89
RNF220-211ENST00000474956 TMEM158Q8WZ71 300 aa9.48□□□□□ -0.89
RNF220-211ENST00000474956 FOXC2Q99958 501 aa9.48□□□□□ -0.89
RNF220-211ENST00000474956 C11orf21Q9P2W6 132 aa9.48□□□□□ -0.89
RNF220-211ENST00000474956 TRBV25-1A0A075B6N4 114 aa9.48□□□□□ -0.89
RNF220-211ENST00000474956 GOSR1O95249 250 aa9.48□□□□□ -0.89
RNF220-211ENST00000474956 HLA-DRB4P13762 266 aa9.48□□□□□ -0.89
RNF220-211ENST00000474956 C20orf173Q96LM9 149 aa9.48□□□□□ -0.89
RNF220-211ENST00000474956 HLA-DRB4X5D2U9 266 aa9.48□□□□□ -0.89
RNF220-211ENST00000474956 PRRC2AP48634 2157 aaKnown RBP9.48□□□□□ -0.89
RNF220-211ENST00000474956 ITPR2Q14571 2701 aa9.48□□□□□ -0.89
RNF220-211ENST00000474956 FLNAP21333 2647 aaKnown RBP9.48□□□□□ -0.89
RNF220-211ENST00000474956 ZC2HC1BQ5TFG8 222 aa9.48□□□□□ -0.89
RNF220-211ENST00000474956 C8orf86Q6ZUL3 223 aa9.48□□□□□ -0.89
RNF220-211ENST00000474956 TTTY13Q9BZ97 58 aa9.48□□□□□ -0.89
RNF220-211ENST00000474956 PF4V1P10720 104 aa9.47□□□□□ -0.89
RNF220-211ENST00000474956 TM2D2Q9BX73 214 aa9.47□□□□□ -0.89
RNF220-211ENST00000474956 AGPAT4-IT1Q9H0P7 198 aa9.47□□□□□ -0.89
RNF220-211ENST00000474956 RBAKDNA6NC62 111 aa9.47□□□□□ -0.89
RNF220-211ENST00000474956 IGHV4-59P01825 116 aa9.47□□□□□ -0.89
RNF220-211ENST00000474956 ARL3P36405 182 aa9.47□□□□□ -0.89
RNF220-211ENST00000474956 RAB9AP51151 201 aa9.47□□□□□ -0.89
RNF220-211ENST00000474956 GTSCR1Q86UQ5 136 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms