RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Igkv6-23A0A140T8N5 115 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Tcf21O35437 179 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Aqp7O54794 303 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Phxr2P15972 65 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Smim9Q3V0X1 137 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Coq2Q66JT7 374 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Hist3h2bbQ8CGP0 126 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Prr15Q9D1T5 122 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Hist3h2baQ9D2U9 126 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Frem2Q6NVD0 3160 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Ighv1-34A0A075B5V2 117 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Zfp971A2BFG8 470 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 H60bB1B212 251 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Ifitm7G3X9Z2 141 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 1700009N14RikQ14AA6 216 aaKnown RBP11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Obp2aQ8K1H9 176 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Fam103a1Q9CQY2 119 aaKnown RBP11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Sh2d6Q9D413 297 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Zfp292Q9Z2U2 2698 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 C2cd4aE9Q861 334 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Reep5Q60870 185 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Smim12Q78RX3 92 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Olfr823Q7TRH2 315 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Lrtm1Q8BXQ3 356 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Olfr824Q8VFU4 315 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Cldn23Q9D7D7 296 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 TslpQ9JIE6 140 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Ighv1-47A0A0A6YY41 117 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Cldn34c4A2ANA3 212 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 1700084M14RikB1AT01 78 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Ptbp1P17225 527 aaKnown RBP11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Defa-rs2P17534 91 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Arf6P62331 175 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 RanP62827 216 aaKnown RBP11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Spem1Q5F289 310 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Ido2Q8R0V5 405 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 H2afb1Q9CQ70 111 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 MmdQ9CQY7 238 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 St6galnac3Q9WUV2 305 aa11.04□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Gm20532G3UXR8 106 aa11.03□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Gm9602J3QPD5 205 aa11.03□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Rab33bO35963 229 aa11.03□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Foxf2O54743 446 aa11.03□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Adcyap1O70176 175 aa11.03□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Gstp1P19157 210 aa11.03□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Slc25a5P51881 298 aaKnown RBP11.03□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 KhkP97328 298 aa11.03□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 CebpdQ00322 268 aa11.03□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Rpl11Q9CXW4 178 aaKnown RBP11.03□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Pard6aQ9Z101 346 aa11.03□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Gm15056F6ZR08 88 aa11.03□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Rpl27aP14115 148 aaKnown RBP11.03□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Ifna14Q810G3 189 aa11.03□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Fam174bQ8K064 153 aa11.03□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Olfr1457Q8VFK3 317 aa11.03□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Pbp2Q8VIN1 187 aa11.03□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Ighv7-2A0A0A6YX91 119 aa11.03□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Gm20422E9PUR3 255 aa11.03□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 3110021N24RikJ3QMN2 152 aa11.03□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Neurog3P70661 214 aa11.03□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Cib3Q0P523 160 aa11.03□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Nabp2Q8R2Y9 212 aa11.03□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Shisal2bQ9D1Y9 158 aa11.03□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Mixl1Q9WUI0 231 aa11.03□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Sorl1O88307 2215 aaKnown RBP11.02□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Ighv8-9A0A0G2JET1 119 aa11.02□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Gm21882J3QN86 361 aa11.02□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Zfp58P16372 489 aa11.02□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 SstP60041 116 aa11.02□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Prdm6Q3UZD5 596 aa11.02□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Pcgf1Q8R023 259 aaKnown RBP11.02□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Borcs7Q9CRC6 105 aa11.02□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Olfr926Q9EQ98 308 aa11.02□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Bcl2l10Q9Z0F3 191 aa11.02□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Gm28372A0A087WNV0 220 aa11.02□□□□□ -0.65
Pdgfra-205ENSMUST00000201711 P06323 132 aa11.02□□□□□ -0.65
Pdgfra-205ENSMUST00000201711 Hoxa1P09022 331 aa11.02□□□□□ -0.65
Pdgfra-205ENSMUST00000201711 Cnn1Q08091 297 aaKnown RBP11.02□□□□□ -0.65
Pdgfra-205ENSMUST00000201711 Vdac1Q60932 296 aaKnown RBP11.02□□□□□ -0.65
Pdgfra-205ENSMUST00000201711 Ccsmst1Q6RUT7 136 aa11.02□□□□□ -0.65
Pdgfra-205ENSMUST00000201711 LgalslbQ7TPX9 165 aa11.02□□□□□ -0.65
Pdgfra-205ENSMUST00000201711 Vmn1r62Q8R2C0 300 aa11.02□□□□□ -0.65
Pdgfra-205ENSMUST00000201711 Nit1Q8VDK1 323 aa11.02□□□□□ -0.65
Pdgfra-205ENSMUST00000201711 Olfr1102Q8VES2 324 aa11.02□□□□□ -0.65
Pdgfra-205ENSMUST00000201711 Vmn1r54Q9EPB8 315 aa11.02□□□□□ -0.65
Pdgfra-205ENSMUST00000201711 Nudt3Q9JI46 168 aa11.02□□□□□ -0.65
Pdgfra-205ENSMUST00000201711 Olfr918E9PVZ7 325 aa11.02□□□□□ -0.65
Pdgfra-205ENSMUST00000201711 Olfr191L7N1Z8 309 aa11.02□□□□□ -0.65
Pdgfra-205ENSMUST00000201711 P04945 108 aa11.02□□□□□ -0.65
Pdgfra-205ENSMUST00000201711 Hspb7P35385 169 aa11.02□□□□□ -0.65
Pdgfra-205ENSMUST00000201711 Pax5Q02650 391 aa11.02□□□□□ -0.65
Pdgfra-205ENSMUST00000201711 HeylQ9DBX7 326 aa11.02□□□□□ -0.65
Pdgfra-205ENSMUST00000201711 Fhl3Q9R059 289 aa11.02□□□□□ -0.65
Pdgfra-205ENSMUST00000201711 Rnf212bD3Z423 297 aa11.01□□□□□ -0.65
Pdgfra-205ENSMUST00000201711 Gm21310J3QQ23 232 aa11.01□□□□□ -0.65
Pdgfra-205ENSMUST00000201711 Bet1lO35153 111 aa11.01□□□□□ -0.65
Pdgfra-205ENSMUST00000201711 Hist1h2bfP10853 126 aa11.01□□□□□ -0.65
Pdgfra-205ENSMUST00000201711 Rpl8P62918 257 aaKnown RBP11.01□□□□□ -0.65
Pdgfra-205ENSMUST00000201711 Spink11Q09TK7 88 aa11.01□□□□□ -0.65
Pdgfra-205ENSMUST00000201711 Vmn1r195Q5SVD6 316 aa11.01□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 44.5 ms