RNA–Protein interactions for RNA: ENSMUST00000165964.7

Lig1-210, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-210ENSMUST00000165964 Trbv3A0A0A6YYE2 117 aa10.09□□□□□ -0.79
Lig1-210ENSMUST00000165964 Gm5218F6YH22 154 aa10.09□□□□□ -0.79
Lig1-210ENSMUST00000165964 Iqcf6G3UWF2 157 aa10.09□□□□□ -0.79
Lig1-210ENSMUST00000165964 Rplp1P47955 114 aa10.09□□□□□ -0.79
Lig1-210ENSMUST00000165964 Patz1Q5NBY9 687 aaKnown RBP10.09□□□□□ -0.79
Lig1-210ENSMUST00000165964 Taar4Q5QD15 347 aa10.09□□□□□ -0.79
Lig1-210ENSMUST00000165964 Slc25a48Q8BW66 306 aa10.09□□□□□ -0.79
Lig1-210ENSMUST00000165964 GrhprQ91Z53 328 aa10.09□□□□□ -0.79
Lig1-210ENSMUST00000165964 Higd1bQ99JY6 98 aa10.09□□□□□ -0.79
Lig1-210ENSMUST00000165964 Mlst8Q9DCJ1 326 aa10.09□□□□□ -0.79
Lig1-210ENSMUST00000165964 Olfr972Q9EQA2 314 aa10.09□□□□□ -0.79
Lig1-210ENSMUST00000165964 Efnb3O35393 340 aa10.09□□□□□ -0.79
Lig1-210ENSMUST00000165964 Hoxb2P0C1T1 354 aa10.09□□□□□ -0.79
Lig1-210ENSMUST00000165964 Prdx2Q61171 198 aaKnown RBP10.09□□□□□ -0.79
Lig1-210ENSMUST00000165964 Nanos1Q80WY3 267 aa10.09□□□□□ -0.79
Lig1-210ENSMUST00000165964 Olfr983Q8VG90 315 aa10.09□□□□□ -0.79
Lig1-210ENSMUST00000165964 Mrpl42Q9CPV3 142 aa10.09□□□□□ -0.79
Lig1-210ENSMUST00000165964 Muc5acE9QAQ8 3455 aa10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 Ighv7-2A0A0A6YX91 119 aa10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 Gm3045A0A1D5RMA1 209 aa10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 Zfp976E9Q981 636 aa10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 Rnf212F6TQD1 307 aa10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 MyadmO35682 320 aaKnown RBP10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 Tnfrsf17O88472 185 aa10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 Tmem40Q4FJU9 225 aa10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 Plppr2Q8VCY8 343 aa10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 Olfr1323Q8VF35 309 aa10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 Hdgfl3Q9JMG7 202 aa10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 Gm28171A0A087WQ19 227 aa10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 Ighv9-2A0A0B4J1J4 117 aa10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 Ccl17F6R5P4 103 aa10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 Spam1P48794 512 aa10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 Acrv1P50289 261 aa10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 NotoQ5TIS6 240 aa10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 Rph3alQ768S4 302 aa10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 Olfr1371Q7TQT7 311 aa10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 Fancd2osQ9D4K4 178 aa10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 Zfp825A0A1Y7VK00 292 aa10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 Samt3A2ARK7 233 aa10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 Cst7O89098 144 aa10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 P01788 123 aa10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 S100a10P08207 97 aa10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 CapgP24452 352 aaKnown RBP10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 Rhox10Q4TU83 196 aa10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 Pafah1b2Q61206 229 aa10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 GgctQ9D7X8 188 aa10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 MNCb-2875Q9DCB3 74 aa10.08□□□□□ -0.8
Lig1-210ENSMUST00000165964 Ighv8-9A0A0G2JET1 119 aa10.07□□□□□ -0.8
Lig1-210ENSMUST00000165964 Gm21882J3QN86 361 aa10.07□□□□□ -0.8
Lig1-210ENSMUST00000165964 Il3raP26952 396 aa10.07□□□□□ -0.8
Lig1-210ENSMUST00000165964 Timp3P39876 211 aa10.07□□□□□ -0.8
Lig1-210ENSMUST00000165964 Pate4Q09098 99 aa10.07□□□□□ -0.8
Lig1-210ENSMUST00000165964 Znf48Q3US17 591 aa10.07□□□□□ -0.8
Lig1-210ENSMUST00000165964 Spred3Q6P6N5 408 aa10.07□□□□□ -0.8
Lig1-210ENSMUST00000165964 Cdc42ep2Q8JZX9 214 aa10.07□□□□□ -0.8
Lig1-210ENSMUST00000165964 Mien1Q9CQ86 115 aa10.07□□□□□ -0.8
Lig1-210ENSMUST00000165964 3110082J24RikF6Z6Z2 108 aa10.07□□□□□ -0.8
Lig1-210ENSMUST00000165964 Cldn34c3J3QJW5 233 aa10.07□□□□□ -0.8
Lig1-210ENSMUST00000165964 Cldn34c2J3QNM1 233 aa10.07□□□□□ -0.8
Lig1-210ENSMUST00000165964 Tnfsf12O54907 249 aa10.07□□□□□ -0.8
Lig1-210ENSMUST00000165964 P01915 264 aa10.07□□□□□ -0.8
Lig1-210ENSMUST00000165964 Hoxa3P02831 443 aa10.07□□□□□ -0.8
Lig1-210ENSMUST00000165964 Mtnd6P03925 172 aa10.07□□□□□ -0.8
Lig1-210ENSMUST00000165964 Fam3dP97805 223 aa10.07□□□□□ -0.8
Lig1-210ENSMUST00000165964 Zcwpw2Q08EN7 125 aa10.07□□□□□ -0.8
Lig1-210ENSMUST00000165964 Srsf6Q3TWW8 339 aaKnown RBP10.07□□□□□ -0.8
Lig1-210ENSMUST00000165964 Rtl4Q3URY0 304 aa10.07□□□□□ -0.8
Lig1-210ENSMUST00000165964 Olfr399Q7TRX3 311 aa10.07□□□□□ -0.8
Lig1-210ENSMUST00000165964 Cldn34c1Q8K193 234 aa10.07□□□□□ -0.8
Lig1-210ENSMUST00000165964 Eaf1Q9D4C5 268 aa10.07□□□□□ -0.8
Lig1-210ENSMUST00000165964 Kcnip2Q9JJ69 270 aa10.07□□□□□ -0.8
Lig1-210ENSMUST00000165964 Kiaa1549Q68FD9 1940 aa10.07□□□□□ -0.8
Lig1-210ENSMUST00000165964 Apc2Q9Z1K7 2274 aa10.06□□□□□ -0.8
Lig1-210ENSMUST00000165964 Trav12d-3A0A075B6A4 115 aa10.06□□□□□ -0.8
Lig1-210ENSMUST00000165964 Ighv1-19A0A0A6YWX0 117 aa10.06□□□□□ -0.8
Lig1-210ENSMUST00000165964 Gm14325A2AW67 498 aa10.06□□□□□ -0.8
Lig1-210ENSMUST00000165964 Cnep1r1Q3UJ81 125 aa10.06□□□□□ -0.8
Lig1-210ENSMUST00000165964 Defb28Q3V2L0 89 aa10.06□□□□□ -0.8
Lig1-210ENSMUST00000165964 Ndufs8Q8K3J1 212 aa10.06□□□□□ -0.8
Lig1-210ENSMUST00000165964 Olfr346Q8VGJ7 309 aa10.06□□□□□ -0.8
Lig1-210ENSMUST00000165964 Rer1Q9CQU3 196 aaKnown RBP10.06□□□□□ -0.8
Lig1-210ENSMUST00000165964 Pxmp4Q9JJW0 212 aa10.06□□□□□ -0.8
Lig1-210ENSMUST00000165964 Pard6aQ9Z101 346 aa10.06□□□□□ -0.8
Lig1-210ENSMUST00000165964 Gm12728V9GX31 77 aa10.06□□□□□ -0.8
Lig1-210ENSMUST00000165964 Degs1O09005 323 aa10.06□□□□□ -0.8
Lig1-210ENSMUST00000165964 BsgP18572 389 aaKnown RBP10.06□□□□□ -0.8
Lig1-210ENSMUST00000165964 RhobP62746 196 aa10.06□□□□□ -0.8
Lig1-210ENSMUST00000165964 Gm10842Q3U587 122 aa10.06□□□□□ -0.8
Lig1-210ENSMUST00000165964 Olfr1178Q7TR20 323 aa10.06□□□□□ -0.8
Lig1-210ENSMUST00000165964 Olfr58Q7TRF6 309 aa10.06□□□□□ -0.8
Lig1-210ENSMUST00000165964 Zcchc10Q9CX48 178 aa10.06□□□□□ -0.8
Lig1-210ENSMUST00000165964 Nudt3Q9JI46 168 aa10.06□□□□□ -0.8
Lig1-210ENSMUST00000165964 CcsQ9WU84 274 aa10.06□□□□□ -0.8
Lig1-210ENSMUST00000165964 Vmn1r149E9PWL6 307 aa10.06□□□□□ -0.8
Lig1-210ENSMUST00000165964 Vmn1r101E9Q365 307 aa10.06□□□□□ -0.8
Lig1-210ENSMUST00000165964 Vmn1r158G3UY92 307 aa10.06□□□□□ -0.8
Lig1-210ENSMUST00000165964 Gabra2P26048 451 aa10.06□□□□□ -0.8
Lig1-210ENSMUST00000165964 Bex6Q3TZW7 114 aa10.06□□□□□ -0.8
Lig1-210ENSMUST00000165964 Smim19Q80ZU4 107 aa10.06□□□□□ -0.8
Lig1-210ENSMUST00000165964 Fbxw26Q8BI58 466 aa10.06□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms