RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Atp6v1fQ9D1K2 119 aa17■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Elovl1Q9JLJ5 279 aa17■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 ApcsP12246 224 aa16.99■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Gm773Q3TML4 206 aa16.99■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Il22ra2Q80XF5 230 aa16.99■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Gm26566Q8CAC1 153 aa16.99■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Ercc8Q8CFD5 397 aa16.99■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Olfr1444Q8VFX2 319 aa16.99■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 B3gnt9Q8VI16 399 aa16.99■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Ms4a6cQ99N08 217 aa16.99■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Gins3Q9CY94 216 aa16.99■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Col13a1Q9R1N9 751 aa16.99■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Qrich2A0A140LIY9 2337 aa16.99■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Vmn1r5B2RQT2 315 aa16.99■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Rnf5O35445 180 aa16.99■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Ucp1P12242 307 aa16.99■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Isoc2aP85094 206 aa16.99■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 BC049730Q810N3 246 aa16.99■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Gm4894Q8CA09 118 aa16.99■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 TdhQ8K3F7 373 aa16.99■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Olfr786Q8VFH8 312 aa16.99■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 4930583I09RikQ9D2E3 102 aa16.99■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Ankhd1E9PUR0 2548 aaKnown RBP16.98■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Brs3O54798 399 aa16.98■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Hist1h1bP43276 223 aaKnown RBP16.98■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Rab11aP62492 216 aaKnown RBP16.98■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Pax6P63015 422 aa16.98■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Calm5Q6W3E0 140 aa16.98■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Smco3Q8BQM7 225 aa16.98■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Olfr513Q8VFZ3 309 aa16.98■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Med6Q921D4 246 aaKnown RBP16.98■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Sfxn4Q925N1 313 aa16.98■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Ndufa5Q9CPP6 116 aa16.98■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Tmem147Q9CQG6 224 aa16.98■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Zfp119aQ9JIC0 545 aa16.98■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Pxmp4Q9JJW0 212 aa16.98■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Ighv1-20A0A0A6YX66 117 aa16.97■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Cdc34bA0A140T8I4 237 aa16.97■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Inafm1E9PV59 130 aa16.97■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Gm21244J3QK38 227 aa16.97■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Cox7a2P48771 83 aa16.97■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 PmchP56942 165 aa16.97■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 KhkP97328 298 aa16.97■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Fam3dP97805 223 aa16.97■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Olfr1178Q7TR20 323 aa16.97■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Olfr138Q7TRI7 312 aa16.97■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Nanos1Q80WY3 267 aa16.97■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Tspan9Q8BJU2 239 aa16.97■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 CenpxQ8C4X1 78 aa16.97■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Cdpf1Q8R3A2 119 aa16.97■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Olfr639Q8VGY8 316 aa16.97■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Cds2Q99L43 444 aa16.97■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Sval2Q99N75 144 aa16.97■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 FlnaQ8BTM8 2647 aaKnown RBP16.97■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Esp6A8R0U0 136 aa16.96■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Olfr893K7N678 312 aa16.96■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Gsx2P31316 305 aa16.96■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Tmem88bQ3TYP4 173 aa16.96■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Coq2Q66JT7 374 aa16.96■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Olfr1290Q7TQX8 312 aa16.96■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Ankrd46Q8BTZ5 228 aa16.96■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Ndufb3Q9CQZ6 104 aa16.96■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Kcnk5Q9JK62 502 aa16.96■□□□□ 0.31
Ccdc88a-202ENSMUST00000109477 Gm5890A0A140LI04 305 aa16.96■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Olfr1124A2AT86 318 aa16.96■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Gm10112D3YWP5 117 aa16.96■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Tmem95P0DJF3 176 aa16.96■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Higd1cQ76I25 96 aa16.96■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Olfr132Q7TRI8 313 aa16.96■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Zfp874aQ8BX23 447 aa16.96■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 GaptQ8CB93 157 aa16.96■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Slc37a1Q8R070 531 aa16.96■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 FuomQ8R2K1 153 aa16.96■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Exosc2Q8VBV3 293 aaKnown RBP16.96■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 GgactQ923B0 149 aa16.96■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Ovol1Q9WTJ2 267 aa16.96■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Ighv1-19A0A0A6YWX0 117 aa16.95■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Gm5239D3YYZ2 122 aa16.95■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Olfr191L7N1Z8 309 aa16.95■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Cxcl2P10889 100 aa16.95■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Rab5cP35278 216 aa16.95■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Hes1P35428 282 aa16.95■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Spam1P48794 512 aa16.95■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 AtraidQ6PGD0 223 aa16.95■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Olfr1454Q8VFW2 307 aa16.95■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Olfr476Q8VGI4 310 aa16.95■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Gins1Q9CZ15 196 aa16.95■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Olfr154Q9QY00 318 aa16.95■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Pla2g2dQ9WVF6 144 aa16.95■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Gm7697A0A0J9YUH2 350 aa16.94■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Gm9495A0A0J9YUZ3 350 aa16.94■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Syngr2O55101 224 aa16.94■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 FmodP50608 376 aa16.94■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Atp5g2P56383 146 aa16.94■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Nars2Q8BGV0 477 aa16.94■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Tsen54Q8C2A2 525 aa16.94■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Slc16a13Q8CE94 428 aa16.94■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Vstm2aQ8R0A6 236 aa16.94■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Olfr1368Q8VFG3 314 aa16.94■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Olfr1155Q8VFR3 314 aa16.94■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms