RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Sec11cQ9D8V7 192 aa18.31■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Mpdu1Q9R0Q9 247 aa18.31■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Tusc2Q9WVF8 110 aa18.31■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Osr1Q9WVG7 266 aa18.31■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Med12A2AGH6 2190 aa18.3■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Slc35d1A2AKQ0 355 aa18.3■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Tmem139E9PX92 214 aa18.3■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Hmgb3O54879 200 aaKnown RBP18.3■□□□□ 0.52
Scn1b-201ENSMUST00000098548 S100a1P56565 94 aa18.3■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Sssca1P56873 199 aa18.3■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Olfr139Q60891 315 aa18.3■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Adora3Q61618 319 aa18.3■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Smco3Q8BQM7 225 aa18.3■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Tmem212Q8C6V3 187 aa18.3■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Rab31Q921E2 194 aa18.3■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Sfxn4Q925N1 313 aa18.3■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Hint2Q9D0S9 163 aa18.3■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Usf3B2RUQ2 2221 aa18.3■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Ankhd1E9PUR0 2548 aaKnown RBP18.3■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Ighv1-7A0A075B5T7 117 aa18.3■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Ighv1-31A0A0A6YWK5 117 aa18.3■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Hyal2O35632 473 aa18.3■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Syngr2O55101 224 aa18.3■□□□□ 0.52
Scn1b-201ENSMUST00000098548 P18529 117 aa18.3■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Sesn1P58006 492 aa18.3■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Slc2a9Q3T9X0 538 aa18.3■□□□□ 0.52
Scn1b-201ENSMUST00000098548 MidnQ3TPJ7 465 aa18.3■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Sap30lQ5SQF8 182 aa18.3■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Olfr473Q8VG44 310 aa18.3■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Kcnip2Q9JJ69 270 aa18.3■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Olfr1458A0A1L1SSD5 307 aa18.29■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Olfr1124A2AT86 318 aa18.29■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Gm7849D3YX03 116 aa18.29■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Sult2a2P50236 285 aa18.29■□□□□ 0.52
Scn1b-201ENSMUST00000098548 4933415F23RikQ14BX6 153 aa18.29■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Scgb2b24Q7M747 112 aa18.29■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Tmem41bQ8K1A5 291 aa18.29■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Commd9Q8K2Q0 198 aa18.29■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Vmn1r66Q8K4I0 310 aa18.29■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Fam96bQ9D187 163 aa18.29■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Sfrp4Q9Z1N6 351 aa18.29■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Prrc2aQ7TSC1 2158 aaKnown RBP18.28■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Olfr39E9PVX1 319 aa18.28■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Tnfsf12O54907 249 aa18.28■□□□□ 0.52
Scn1b-201ENSMUST00000098548 B2mP01887 119 aa18.28■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Prkar2aP12367 401 aa18.28■□□□□ 0.52
Scn1b-201ENSMUST00000098548 SlpiP97430 131 aa18.28■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Rnase11Q5GAM9 192 aa18.28■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Olfr138Q7TRI7 312 aa18.28■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Mob3bQ8VE04 216 aa18.28■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Ociad1Q9CRD0 247 aaKnown RBP18.28■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Trex2Q9R1A9 236 aa18.28■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Prpf8Q99PV0 2335 aaKnown RBP18.27■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Ndufb11O09111 151 aa18.27■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Mef2bO55087 349 aa18.27■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Rps16P14131 146 aaKnown RBP18.27■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Rom1P32958 351 aa18.27■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Cd300lbQ3U497 209 aa18.27■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Cdkn2aQ64364 169 aa18.27■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Eif5a2Q8BGY2 153 aaKnown RBP18.27■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Siglec12Q91Y57 467 aa18.27■□□□□ 0.52
Scn1b-201ENSMUST00000098548 RTRAFQ9CQE8 244 aa18.27■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Cox20Q9D7J4 117 aa18.27■□□□□ 0.52
Scn1b-201ENSMUST00000098548 Cd209gD3Z5D4 194 aa18.26■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Gm20825J3QM67 227 aa18.26■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Csn1s2bP02664 143 aa18.26■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Ssty2Q149W4 227 aa18.26■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Gm21394Q497R7 227 aa18.26■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Gm20854Q62461 227 aa18.26■□□□□ 0.51
Scn1b-201ENSMUST00000098548 EnkurQ6SP97 255 aa18.26■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Tmprss11dQ8VHK8 417 aa18.26■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Hdgfl3Q9JMG7 202 aa18.26■□□□□ 0.51
Scn1b-201ENSMUST00000098548 F5O88783 2183 aa18.26■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Trbv5A0A0B4J1G9 113 aa18.25■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Gm21244J3QK38 227 aa18.25■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Rnf5O35445 180 aa18.25■□□□□ 0.51
Scn1b-201ENSMUST00000098548 P01806 116 aa18.25■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Cd79bP15530 228 aa18.25■□□□□ 0.51
Scn1b-201ENSMUST00000098548 CenptQ3TJM4 515 aa18.25■□□□□ 0.51
Scn1b-201ENSMUST00000098548 ErasQ7TN89 227 aa18.25■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Zfp874aQ8BX23 447 aa18.25■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Olfr1183Q8VFF8 303 aa18.25■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Rab27bQ99P58 218 aa18.25■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Ssna1Q9JJ94 119 aa18.25■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Fbp1Q9QXD6 338 aa18.25■□□□□ 0.51
Scn1b-201ENSMUST00000098548 SnapinQ9Z266 136 aa18.25■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Mgst2A2RST1 147 aa18.25■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Mmp27D3YV89 551 aa18.25■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Gm8653K9J7G2 307 aa18.25■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Vmn1r117L7N2C9 307 aa18.25■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Klrd1O54707 179 aa18.25■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Hoxa1P09022 331 aa18.25■□□□□ 0.51
Scn1b-201ENSMUST00000098548 ApcsP12246 224 aa18.25■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Rpl8P62918 257 aaKnown RBP18.25■□□□□ 0.51
Scn1b-201ENSMUST00000098548 KcnrgQ2TUM3 264 aa18.25■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Gm4894Q8CA09 118 aa18.25■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Iba57Q8CAK1 358 aaKnown RBP18.25■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Olfr1202Q8VF98 309 aa18.25■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Zcchc10Q9CX48 178 aa18.25■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Rnf125Q9D9R0 233 aa18.25■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms