RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 5930422O12RikQ8C4Y4 123 aa7.81□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Gm17334Q8C6U3 126 aa7.81□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Vmn1r216Q8R257 298 aa7.81□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 MavsQ8VCF0 503 aa7.81□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Olfr1012Q8VFJ7 311 aa7.81□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Loxl4Q924C6 757 aa7.81□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Gpx7Q99LJ6 186 aa7.81□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Adamtsl1Q8BLI0 1745 aa7.81□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Saa2P05367 122 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Khdc1cQ4KL78 166 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Defa23Q5G866 93 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Olfr399Q7TRX3 311 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Znf146Q8BQN6 292 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 3100002H09RikQ9CXW6 140 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Hcfc2Q9D968 241 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 AsmtD3KU66 387 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Ankrd66J3QNN4 192 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 P01634 136 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Cd5P13379 494 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Arf6P62331 175 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Olfr322Q5NCC8 327 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Rgp1Q8BHT7 391 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Cd200r5Q8BTP3 270 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Tspan2Q922J6 221 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 5530401A14RikQ9D3H9 131 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Csn3P06796 181 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Pilrb2Q2YFS1 225 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Olfr1209Q3SXJ3 310 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Zic3Q62521 466 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 OstcQ78XF5 149 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Carhsp1Q9CR86 148 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Psmg3Q9CZH3 122 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 GgctQ9D7X8 188 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Defb5Q9EPV9 64 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Cd200r1Q9ES57 326 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 FocadA2AKG8 1798 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Ubr2Q6WKZ8 1755 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Tcrg-V6A0A075B5Y8 134 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Trav16A0A075B653 116 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Amn1B8JKV0 258 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 PlnP61014 52 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Prss46Q5M8S2 314 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 LgalslbQ7TPX9 165 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Mrpl43Q99N89 183 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Nkg7Q99PA5 165 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Srp19Q9D7A6 144 aa7.8□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Scn11aQ9R053 1765 aa7.79□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Fam53aE9PV82 402 aa7.79□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Grem1O70326 184 aa7.79□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Tmprss12Q3V0Q7 336 aa7.79□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Psg27Q497W2 474 aa7.79□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Olfr1173Q7TR24 312 aa7.79□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Gm14443A2ARX0 610 aa7.79□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Dnajc13D4AFX7 2248 aaKnown RBP7.79□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Olfr235E9Q9Z6 312 aa7.79□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Lamb1P02469 1786 aa7.79□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Gstp2P46425 210 aa7.79□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Csrp3P50462 194 aa7.79□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Gfra1P97785 468 aa7.79□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 CxadrP97792 365 aa7.79□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 D130052B06RikQ3UW13 202 aa7.79□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Gm9944Q8C559 102 aa7.79□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 ChodlQ9CXM0 273 aa7.79□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Phlda3Q9WV95 125 aa7.79□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Slurp1Q9Z0K7 110 aa7.79□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 TriobpQ99KW3 2014 aa7.79□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Ly6g6fB2RXM6 300 aa7.79□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Gm11232Q5SPI8 295 aa7.79□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Mrps36Q9CQX8 102 aa7.79□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Igkv15-103A0A140T8P3 115 aa7.79□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 AponG3X9D6 251 aa7.79□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 P01657 111 aa7.79□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Q8VE95 218 aa7.79□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Tmem50aQ9CXL1 157 aa7.79□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 CrebbpP45481 2441 aa7.79□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 CroccQ8CJ40 2009 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Olfr1192-ps1A0A1L1SRD7 309 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Frrs1lB1AXV0 293 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Q149G0 166 aaKnown RBP7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Treml4Q3LRV9 263 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Trav15-1-dv6-1Q5R1D2 117 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Foxb2Q64733 428 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Negr1Q80Z24 348 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Klk7Q91VE3 249 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Iah1Q9DB29 249 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Col18a1P39061 1774 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Trav7-4A0A075B6C1 113 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Ccl11P48298 97 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Ssbp4Q3U4B1 363 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Trav7d-4Q5R1H9 113 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Arl6ip6Q8BH07 226 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Trpt1Q8K3A2 249 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Tmem42Q9CR22 157 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Avpi1Q9D7H4 142 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Ank1Q02357 1862 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Trbv1A0A0B4J1G7 116 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Olfr364-ps1A0A140T8Q2 307 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Znf385cA2A5E6 429 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Olfr466E9Q2B9 308 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Tnfsf12O54907 249 aa7.78□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms