RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 UBE2D3P61077 147 aa4.62□□□□□ -1.67
TUBGCP4-207ENST00000563963 UBE2D2P62837 147 aa4.62□□□□□ -1.67
TUBGCP4-207ENST00000563963 DCANP1Q8TF63 244 aa4.62□□□□□ -1.67
TUBGCP4-207ENST00000563963 FOXQ1Q9C009 403 aa4.62□□□□□ -1.67
TUBGCP4-207ENST00000563963 DEC1Q9P2X7 70 aa4.62□□□□□ -1.67
TUBGCP4-207ENST00000563963 HCSTQ9UBK5 93 aa4.62□□□□□ -1.67
TUBGCP4-207ENST00000563963 CHD6Q8TD26 2715 aa4.61□□□□□ -1.67
TUBGCP4-207ENST00000563963 NUP210Q8TEM1 1887 aaPredicted RBP4.61□□□□□ -1.67
TUBGCP4-207ENST00000563963 SFTA2Q6UW10 78 aa4.61□□□□□ -1.67
TUBGCP4-207ENST00000563963 SLC50A1Q9BRV3 221 aa4.61□□□□□ -1.67
TUBGCP4-207ENST00000563963 C6orf106Q9H6K1 298 aaPredicted RBP4.61□□□□□ -1.67
TUBGCP4-207ENST00000563963 POLQO75417 2590 aa4.61□□□□□ -1.67
TUBGCP4-207ENST00000563963 KIAA2026Q5HYC2 2103 aa4.61□□□□□ -1.67
TUBGCP4-207ENST00000563963 TRBV10-2A0A0K0K1G8 114 aa4.61□□□□□ -1.67
TUBGCP4-207ENST00000563963 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.61□□□□□ -1.67
TUBGCP4-207ENST00000563963 SLC25A16P16260 332 aa4.61□□□□□ -1.67
TUBGCP4-207ENST00000563963 Q1RN00 199 aa4.61□□□□□ -1.67
TUBGCP4-207ENST00000563963 C19orf54Q5BKX5 351 aa4.61□□□□□ -1.67
TUBGCP4-207ENST00000563963 PVRIGQ6DKI7 326 aa4.61□□□□□ -1.67
TUBGCP4-207ENST00000563963 CLEC19AQ6UXS0 136 aa4.61□□□□□ -1.67
TUBGCP4-207ENST00000563963 DOCK7Q96N67 2140 aa4.61□□□□□ -1.67
TUBGCP4-207ENST00000563963 ZNF73O43830 326 aaPredicted RBP4.61□□□□□ -1.67
TUBGCP4-207ENST00000563963 AVPP01185 164 aa4.61□□□□□ -1.67
TUBGCP4-207ENST00000563963 NOTCH1P46531 2555 aa4.61□□□□□ -1.67
TUBGCP4-207ENST00000563963 SS18Q15532 418 aa4.61□□□□□ -1.67
TUBGCP4-207ENST00000563963 FAM120AOSQ5T036 256 aa4.61□□□□□ -1.67
TUBGCP4-207ENST00000563963 TM2D3Q9BRN9 247 aa4.61□□□□□ -1.67
TUBGCP4-207ENST00000563963 C16orf95Q9H693 158 aa4.61□□□□□ -1.67
TUBGCP4-207ENST00000563963 PTPRSQ13332 1948 aa4.61□□□□□ -1.67
TUBGCP4-207ENST00000563963 S100A4P26447 101 aaKnown RBP4.6□□□□□ -1.67
TUBGCP4-207ENST00000563963 UBE2BP63146 152 aa4.6□□□□□ -1.67
TUBGCP4-207ENST00000563963 COX14Q96I36 57 aa4.6□□□□□ -1.67
TUBGCP4-207ENST00000563963 SCN3AQ9NY46 2000 aa4.6□□□□□ -1.67
TUBGCP4-207ENST00000563963 A0A1B0GXF2 115 aa4.6□□□□□ -1.67
TUBGCP4-207ENST00000563963 NDUFC1O43677 76 aa4.6□□□□□ -1.67
TUBGCP4-207ENST00000563963 RPS27P42677 84 aaKnown RBP4.6□□□□□ -1.67
TUBGCP4-207ENST00000563963 LINC00114Q6XXX2 140 aa4.6□□□□□ -1.67
TUBGCP4-207ENST00000563963 ZFP2Q6ZN57 461 aa4.6□□□□□ -1.67
TUBGCP4-207ENST00000563963 TMEM75Q8N9X5 138 aa4.6□□□□□ -1.67
TUBGCP4-207ENST00000563963 TRAV8-3A0A0A6YYJ7 113 aa4.6□□□□□ -1.67
TUBGCP4-207ENST00000563963 SMIM27A0A1W2PRY6 76 aa4.6□□□□□ -1.67
TUBGCP4-207ENST00000563963 EPM2AB3EWF7 344 aa4.6□□□□□ -1.67
TUBGCP4-207ENST00000563963 PAPPA-AS1Q5QFB9 102 aa4.6□□□□□ -1.67
TUBGCP4-207ENST00000563963 CD177Q8N6Q3 437 aa4.6□□□□□ -1.67
TUBGCP4-207ENST00000563963 SPATA3Q8NHX4 192 aa4.6□□□□□ -1.67
TUBGCP4-207ENST00000563963 ESM1Q9NQ30 184 aa4.6□□□□□ -1.67
TUBGCP4-207ENST00000563963 PLXNA2O75051 1894 aa4.6□□□□□ -1.67
TUBGCP4-207ENST00000563963 RFESDQ8TAC1 157 aa4.59□□□□□ -1.67
TUBGCP4-207ENST00000563963 MPLKIPQ8TAP9 179 aa4.59□□□□□ -1.67
TUBGCP4-207ENST00000563963 C18orf12Q96KH6 178 aa4.59□□□□□ -1.67
TUBGCP4-207ENST00000563963 LAMA2P24043 3122 aaKnown RBP4.59□□□□□ -1.67
TUBGCP4-207ENST00000563963 INAFM2P0DMQ5 153 aa4.59□□□□□ -1.67
TUBGCP4-207ENST00000563963 GYPEP15421 78 aa4.59□□□□□ -1.67
TUBGCP4-207ENST00000563963 NNATQ16517 81 aa4.59□□□□□ -1.67
TUBGCP4-207ENST00000563963 IGKV1-8A0A0C4DH67 115 aa4.59□□□□□ -1.68
TUBGCP4-207ENST00000563963 TEX49A0A1B0GTD5 131 aa4.59□□□□□ -1.68
TUBGCP4-207ENST00000563963 EPOPA6NHQ4 379 aa4.59□□□□□ -1.68
TUBGCP4-207ENST00000563963 LCA10Q71F78 164 aa4.59□□□□□ -1.68
TUBGCP4-207ENST00000563963 VN1R4Q7Z5H5 301 aa4.59□□□□□ -1.68
TUBGCP4-207ENST00000563963 MARCH3Q86UD3 253 aa4.59□□□□□ -1.68
TUBGCP4-207ENST00000563963 PSENENQ9NZ42 101 aa4.59□□□□□ -1.68
TUBGCP4-207ENST00000563963 SLC25A15Q9Y619 301 aa4.59□□□□□ -1.68
TUBGCP4-207ENST00000563963 VWA8A3KMH1 1905 aa4.59□□□□□ -1.68
TUBGCP4-207ENST00000563963 C4orf51C9J302 202 aa4.58□□□□□ -1.68
TUBGCP4-207ENST00000563963 PRSS1P07477 247 aa4.58□□□□□ -1.68
TUBGCP4-207ENST00000563963 FXYD4P59646 89 aa4.58□□□□□ -1.68
TUBGCP4-207ENST00000563963 TMEM14DPA8MWL7 114 aa4.58□□□□□ -1.68
TUBGCP4-207ENST00000563963 H0YGG7 62 aa4.58□□□□□ -1.68
TUBGCP4-207ENST00000563963 IFI27P40305 119 aaPredicted RBP4.58□□□□□ -1.68
TUBGCP4-207ENST00000563963 FXYD3Q14802 87 aa4.58□□□□□ -1.68
TUBGCP4-207ENST00000563963 TMEM30BQ3MIR4 351 aa4.58□□□□□ -1.68
TUBGCP4-207ENST00000563963 RUSC1-AS1Q66K80 236 aa4.58□□□□□ -1.68
TUBGCP4-207ENST00000563963 FP248Q71RG6 208 aaPredicted RBP4.58□□□□□ -1.68
TUBGCP4-207ENST00000563963 TOMM6Q96B49 74 aa4.58□□□□□ -1.68
TUBGCP4-207ENST00000563963 ARHGAP5-AS1Q96IT6 56 aa4.58□□□□□ -1.68
TUBGCP4-207ENST00000563963 CACNA1CQ13936 2221 aa4.58□□□□□ -1.68
TUBGCP4-207ENST00000563963 MDC1Q14676 2089 aaKnown RBP4.58□□□□□ -1.68
TUBGCP4-207ENST00000563963 SCN2AQ99250 2005 aa4.58□□□□□ -1.68
TUBGCP4-207ENST00000563963 F5H697 171 aa4.58□□□□□ -1.68
TUBGCP4-207ENST00000563963 M0R381 172 aa4.58□□□□□ -1.68
TUBGCP4-207ENST00000563963 CCKP06307 115 aa4.58□□□□□ -1.68
TUBGCP4-207ENST00000563963 RPS21P63220 83 aaKnown RBP4.58□□□□□ -1.68
TUBGCP4-207ENST00000563963 DEFB103AP81534 67 aa4.58□□□□□ -1.68
TUBGCP4-207ENST00000563963 NSUN5P1Q3KNT7 163 aa4.58□□□□□ -1.68
TUBGCP4-207ENST00000563963 LCE2DQ5TA82 110 aaPredicted RBP4.58□□□□□ -1.68
TUBGCP4-207ENST00000563963 ZNF525Q8N782 197 aa4.58□□□□□ -1.68
TUBGCP4-207ENST00000563963 LTAP01374 205 aa4.58□□□□□ -1.68
TUBGCP4-207ENST00000563963 NPPCP23582 126 aa4.58□□□□□ -1.68
TUBGCP4-207ENST00000563963 FUSP35637 526 aaKnown RBP eCLIP4.58□□□□□ -1.68
TUBGCP4-207ENST00000563963 HEATR1Q9H583 2144 aaKnown RBP4.57□□□□□ -1.68
TUBGCP4-207ENST00000563963 HELZ2Q9BYK8 2649 aaKnown RBP4.57□□□□□ -1.68
TUBGCP4-207ENST00000563963 AHCTF1Q8WYP5 2266 aa4.57□□□□□ -1.68
TUBGCP4-207ENST00000563963 SCO2A0A1W2PP80 73 aa4.57□□□□□ -1.68
TUBGCP4-207ENST00000563963 M0R378 163 aa4.57□□□□□ -1.68
TUBGCP4-207ENST00000563963 FHL1Q13642 323 aa4.57□□□□□ -1.68
TUBGCP4-207ENST00000563963 TMEM190Q8WZ59 177 aa4.57□□□□□ -1.68
TUBGCP4-207ENST00000563963 FANCD2OSQ96PS1 177 aa4.57□□□□□ -1.68
TUBGCP4-207ENST00000563963 SMG1Q96Q15 3661 aaKnown RBP4.57□□□□□ -1.68
TUBGCP4-207ENST00000563963 ZNF883P0CG24 379 aa4.57□□□□□ -1.68
TUBGCP4-207ENST00000563963 C20orf197Q8N268 126 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms