RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 MYT1Q01538 1121 aa11.09□□□□□ -0.63
TUBGCP4-207ENST00000563963 PELP1Q8IZL8 1130 aaKnown RBP10.98□□□□□ -0.65
TUBGCP4-207ENST00000563963 SLC24A1O60721 1099 aa10.86□□□□□ -0.67
TUBGCP4-207ENST00000563963 TTBK1Q5TCY1 1321 aaPredicted RBP10.75□□□□□ -0.69
TUBGCP4-207ENST00000563963 ERICH6Q7L0X2 663 aa10.42□□□□□ -0.74
TUBGCP4-207ENST00000563963 NISCHQ9Y2I1 1504 aa10.21□□□□□ -0.78
TUBGCP4-207ENST00000563963 DAXXQ9UER7 740 aaPredicted RBP10.17□□□□□ -0.78
TUBGCP4-207ENST00000563963 PRKCSHP14314 528 aaPredicted RBP10.16□□□□□ -0.78
TUBGCP4-207ENST00000563963 AEBP2Q6ZN18 517 aaPredicted RBP10.15□□□□□ -0.78
TUBGCP4-207ENST00000563963 APLP2Q06481 763 aa10.07□□□□□ -0.8
TUBGCP4-207ENST00000563963 CHIC1Q5VXU3 224 aa9.83□□□□□ -0.84
TUBGCP4-207ENST00000563963 EIF5BO60841 1220 aaKnown RBP9.72□□□□□ -0.85
TUBGCP4-207ENST00000563963 DNAJC5Q9H3Z4 198 aa9.67□□□□□ -0.86
TUBGCP4-207ENST00000563963 BCL11AQ9H165 835 aa9.65□□□□□ -0.87
TUBGCP4-207ENST00000563963 RANGAP1P46060 587 aaPredicted RBP9.64□□□□□ -0.87
TUBGCP4-207ENST00000563963 NCBP3Q53F19 620 aaKnown RBP9.6□□□□□ -0.87
TUBGCP4-207ENST00000563963 EHMT2Q96KQ7 1210 aa9.56□□□□□ -0.88
TUBGCP4-207ENST00000563963 CCDC180Q9P1Z9 1646 aa9.54□□□□□ -0.88
TUBGCP4-207ENST00000563963 ARXQ96QS3 562 aa9.42□□□□□ -0.9
TUBGCP4-207ENST00000563963 PHF23Q9BUL5 403 aaPredicted RBP9.42□□□□□ -0.9
TUBGCP4-207ENST00000563963 RTN4Q9NQC3 1192 aaKnown RBP9.38□□□□□ -0.91
TUBGCP4-207ENST00000563963 CENPBP07199 599 aaPredicted RBP9.36□□□□□ -0.91
TUBGCP4-207ENST00000563963 FAM9AQ8IZU1 332 aaPredicted RBP9.35□□□□□ -0.91
TUBGCP4-207ENST00000563963 PLPPR3Q6T4P5 718 aa9.32□□□□□ -0.92
TUBGCP4-207ENST00000563963 PODXL2Q9NZ53 605 aa9.23□□□□□ -0.93
TUBGCP4-207ENST00000563963 AMER1Q5JTC6 1135 aaPredicted RBP9.2□□□□□ -0.94
TUBGCP4-207ENST00000563963 PLEKHG5O94827 1062 aa9.19□□□□□ -0.94
TUBGCP4-207ENST00000563963 HOMEZQ8IX15 550 aa9.19□□□□□ -0.94
TUBGCP4-207ENST00000563963 TRIM41Q8WV44 630 aa9.19□□□□□ -0.94
TUBGCP4-207ENST00000563963 ABCC9O60706 1549 aa9.18□□□□□ -0.94
TUBGCP4-207ENST00000563963 TIMELESSQ9UNS1 1208 aa9.15□□□□□ -0.94
TUBGCP4-207ENST00000563963 HRCP23327 699 aa9.13□□□□□ -0.95
TUBGCP4-207ENST00000563963 KLHL34Q8N239 644 aa9.12□□□□□ -0.95
TUBGCP4-207ENST00000563963 TULP1O00294 542 aaPredicted RBP9.11□□□□□ -0.95
TUBGCP4-207ENST00000563963 SCAF1Q9H7N4 1312 aaKnown RBP9.1□□□□□ -0.95
TUBGCP4-207ENST00000563963 UBE2Q2Q8WVN8 375 aa9.08□□□□□ -0.96
TUBGCP4-207ENST00000563963 RB1CC1Q8TDY2 1594 aa9.05□□□□□ -0.96
TUBGCP4-207ENST00000563963 NEFLP07196 543 aa9.05□□□□□ -0.96
TUBGCP4-207ENST00000563963 NACADO15069 1562 aa8.98□□□□□ -0.97
TUBGCP4-207ENST00000563963 PKNOX2Q96KN3 472 aa8.98□□□□□ -0.97
TUBGCP4-207ENST00000563963 ANP32EQ9BTT0 268 aa8.96□□□□□ -0.97
TUBGCP4-207ENST00000563963 PDIA4P13667 645 aaKnown RBP8.96□□□□□ -0.98
TUBGCP4-207ENST00000563963 SHROOM4Q9ULL8 1493 aa8.95□□□□□ -0.98
TUBGCP4-207ENST00000563963 MYO15BQ96JP2 1530 aa8.93□□□□□ -0.98
TUBGCP4-207ENST00000563963 NPM2Q86SE8 214 aaKnown RBP8.92□□□□□ -0.98
TUBGCP4-207ENST00000563963 PDE4CQ08493 712 aa8.91□□□□□ -0.98
TUBGCP4-207ENST00000563963 TAOK2Q9UL54 1235 aa8.88□□□□□ -0.99
TUBGCP4-207ENST00000563963 DCAF8L2P0C7V8 631 aa8.87□□□□□ -0.99
TUBGCP4-207ENST00000563963 C14orf37Q86TY3 774 aa8.86□□□□□ -0.99
TUBGCP4-207ENST00000563963 DNAJC5BQ9UF47 199 aa8.83□□□□□ -1
TUBGCP4-207ENST00000563963 TPRNQ4KMQ1 711 aa8.81□□□□□ -1
TUBGCP4-207ENST00000563963 BCANQ96GW7 911 aa8.81□□□□□ -1
TUBGCP4-207ENST00000563963 ANO8Q9HCE9 1232 aaPredicted RBP8.8□□□□□ -1
TUBGCP4-207ENST00000563963 TAF7LQ5H9L4 462 aa8.76□□□□□ -1.01
TUBGCP4-207ENST00000563963 KCNA4P22459 653 aa8.76□□□□□ -1.01
TUBGCP4-207ENST00000563963 GLIPR1L2Q4G1C9 344 aa8.76□□□□□ -1.01
TUBGCP4-207ENST00000563963 ILDR1Q86SU0 546 aaPredicted RBP8.75□□□□□ -1.01
TUBGCP4-207ENST00000563963 ACIN1Q9UKV3 1341 aaKnown RBP8.75□□□□□ -1.01
TUBGCP4-207ENST00000563963 FBXO3Q9UK99 471 aa8.73□□□□□ -1.01
TUBGCP4-207ENST00000563963 GTF3C3Q9Y5Q9 886 aa8.73□□□□□ -1.01
TUBGCP4-207ENST00000563963 CSRNP3Q8WYN3 585 aa8.73□□□□□ -1.01
TUBGCP4-207ENST00000563963 ERICH6BQ5W0A0 696 aa8.71□□□□□ -1.02
TUBGCP4-207ENST00000563963 HAP1P54257 671 aaPredicted RBP8.7□□□□□ -1.02
TUBGCP4-207ENST00000563963 CLSPNQ9HAW4 1339 aa8.7□□□□□ -1.02
TUBGCP4-207ENST00000563963 MYT1LQ9UL68 1186 aa8.7□□□□□ -1.02
TUBGCP4-207ENST00000563963 DCAF1Q9Y4B6 1507 aa8.69□□□□□ -1.02
TUBGCP4-207ENST00000563963 CDK11BP21127 795 aaKnown RBP8.68□□□□□ -1.02
TUBGCP4-207ENST00000563963 CDK11AQ9UQ88 783 aaPredicted RBP8.68□□□□□ -1.02
TUBGCP4-207ENST00000563963 ZNF326Q5BKZ1 582 aaKnown RBP8.68□□□□□ -1.02
TUBGCP4-207ENST00000563963 BRD2P25440 801 aaKnown RBP8.68□□□□□ -1.02
TUBGCP4-207ENST00000563963 ZEB1P37275 1124 aaPredicted RBP8.64□□□□□ -1.03
TUBGCP4-207ENST00000563963 CHMP4AQ9BY43 222 aa8.64□□□□□ -1.03
TUBGCP4-207ENST00000563963 UNC13AQ9UPW8 1703 aa8.63□□□□□ -1.03
TUBGCP4-207ENST00000563963 BCL11BQ9C0K0 894 aaPredicted RBP8.62□□□□□ -1.03
TUBGCP4-207ENST00000563963 PPARGC1BQ86YN6 1023 aaKnown RBP8.62□□□□□ -1.03
TUBGCP4-207ENST00000563963 FGD1P98174 961 aa8.61□□□□□ -1.03
TUBGCP4-207ENST00000563963 DHX37Q8IY37 1157 aaKnown RBP8.57□□□□□ -1.04
TUBGCP4-207ENST00000563963 POLR3GLQ9BT43 218 aa8.57□□□□□ -1.04
TUBGCP4-207ENST00000563963 A0A0U1RQG5 324 aaPredicted RBP8.57□□□□□ -1.04
TUBGCP4-207ENST00000563963 BICRAQ9NZM4 1560 aa8.56□□□□□ -1.04
TUBGCP4-207ENST00000563963 HSP90B1P14625 803 aaKnown RBP8.54□□□□□ -1.04
TUBGCP4-207ENST00000563963 CCDC136Q96JN2 1154 aa8.53□□□□□ -1.04
TUBGCP4-207ENST00000563963 SALL2Q9Y467 1007 aaPredicted RBP8.53□□□□□ -1.04
TUBGCP4-207ENST00000563963 HMGB1P09429 215 aaKnown RBP8.52□□□□□ -1.05
TUBGCP4-207ENST00000563963 NAP1L5Q96NT1 182 aaPredicted RBP8.52□□□□□ -1.05
TUBGCP4-207ENST00000563963 LOC105371045A0A1W2PR82 267 aa8.51□□□□□ -1.05
TUBGCP4-207ENST00000563963 TRHP20396 242 aaPredicted RBP8.5□□□□□ -1.05
TUBGCP4-207ENST00000563963 NEUROD1Q13562 356 aa8.5□□□□□ -1.05
TUBGCP4-207ENST00000563963 TRIM26Q12899 539 aaPredicted RBP8.48□□□□□ -1.05
TUBGCP4-207ENST00000563963 CNKSR2Q8WXI2 1034 aa8.47□□□□□ -1.05
TUBGCP4-207ENST00000563963 SAMD1Q6SPF0 538 aaPredicted RBP8.47□□□□□ -1.05
TUBGCP4-207ENST00000563963 YTHDC1Q96MU7 727 aaKnown RBP8.47□□□□□ -1.05
TUBGCP4-207ENST00000563963 ZCCHC6Q5VYS8 1495 aaKnown RBP8.46□□□□□ -1.06
TUBGCP4-207ENST00000563963 TMEM132AQ24JP5 1023 aa8.46□□□□□ -1.06
TUBGCP4-207ENST00000563963 SUPT5HO00267 1087 aaKnown RBP8.45□□□□□ -1.06
TUBGCP4-207ENST00000563963 DEKP35659 375 aaKnown RBP8.45□□□□□ -1.06
TUBGCP4-207ENST00000563963 CC2D2AQ9P2K1 1620 aa8.44□□□□□ -1.06
TUBGCP4-207ENST00000563963 AAMPQ13685 434 aa8.44□□□□□ -1.06
TUBGCP4-207ENST00000563963 CECR2Q9BXF3 1484 aa8.44□□□□□ -1.06
TUBGCP4-207ENST00000563963 SOCS7O14512 581 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms