RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 MUSTN1Q8IVN3 82 aa4.84□□□□□ -1.64
LINC02397-201ENST00000504409 EGR1P18146 543 aa4.83□□□□□ -1.64
LINC02397-201ENST00000504409 TRAV7A0A075B6U4 112 aa4.83□□□□□ -1.64
LINC02397-201ENST00000504409 CD164L2Q6UWJ8 174 aa4.83□□□□□ -1.64
LINC02397-201ENST00000504409 PRR19A6NJB7 356 aa4.83□□□□□ -1.64
LINC02397-201ENST00000504409 KNL1Q8NG31 2342 aa4.83□□□□□ -1.64
LINC02397-201ENST00000504409 ZNF134P52741 427 aa4.83□□□□□ -1.64
LINC02397-201ENST00000504409 DAZ2Q13117 558 aaKnown RBP4.83□□□□□ -1.64
LINC02397-201ENST00000504409 DAZ4Q86SG3 579 aaKnown RBP4.83□□□□□ -1.64
LINC02397-201ENST00000504409 DAZ3Q9NR90 486 aaKnown RBP4.83□□□□□ -1.64
LINC02397-201ENST00000504409 ABCA7Q8IZY2 2146 aa4.83□□□□□ -1.64
LINC02397-201ENST00000504409 FXYD2P54710 66 aa4.83□□□□□ -1.64
LINC02397-201ENST00000504409 RPL39P5Q59GN2 51 aa4.83□□□□□ -1.64
LINC02397-201ENST00000504409 C5orf38Q86SI9 138 aa4.83□□□□□ -1.64
LINC02397-201ENST00000504409 IGHV1-3A0A0C4DH29 117 aa4.83□□□□□ -1.64
LINC02397-201ENST00000504409 LINC01546A6NGU7 62 aa4.83□□□□□ -1.64
LINC02397-201ENST00000504409 IGKV1D-8A0A087WSZ0 117 aa4.83□□□□□ -1.64
LINC02397-201ENST00000504409 NKAPP1Q8N9T2 125 aa4.83□□□□□ -1.64
LINC02397-201ENST00000504409 TINCRA0A1B0GVN0 87 aa4.83□□□□□ -1.64
LINC02397-201ENST00000504409 OPRPNQ99935 248 aaPredicted RBP4.82□□□□□ -1.64
LINC02397-201ENST00000504409 SLC25A45Q8N413 288 aa4.82□□□□□ -1.64
LINC02397-201ENST00000504409 SRXN1Q9BYN0 137 aa4.82□□□□□ -1.64
LINC02397-201ENST00000504409 PAX4O43316 350 aa4.82□□□□□ -1.64
LINC02397-201ENST00000504409 PAX8Q06710 450 aa4.82□□□□□ -1.64
LINC02397-201ENST00000504409 CPAMD8Q8IZJ3 1885 aa4.82□□□□□ -1.64
LINC02397-201ENST00000504409 IGHV3-9P01782 118 aa4.82□□□□□ -1.64
LINC02397-201ENST00000504409 WFDC2Q14508 124 aa4.82□□□□□ -1.64
LINC02397-201ENST00000504409 COL4A1P02462 1669 aa4.82□□□□□ -1.64
LINC02397-201ENST00000504409 CDK2AP2O75956 126 aa4.82□□□□□ -1.64
LINC02397-201ENST00000504409 P0C879 139 aa4.82□□□□□ -1.64
LINC02397-201ENST00000504409 UCN2Q96RP3 112 aa4.82□□□□□ -1.64
LINC02397-201ENST00000504409 MBD6Q96DN6 1003 aa4.82□□□□□ -1.64
LINC02397-201ENST00000504409 KAAG1Q9UBP8 84 aa4.82□□□□□ -1.64
LINC02397-201ENST00000504409 DKK2Q9UBU2 259 aa4.82□□□□□ -1.64
LINC02397-201ENST00000504409 DAD1P61803 113 aa4.82□□□□□ -1.64
LINC02397-201ENST00000504409 VPREB3Q9UKI3 123 aa4.82□□□□□ -1.64
LINC02397-201ENST00000504409 A0A1W2PR77 199 aa4.82□□□□□ -1.64
LINC02397-201ENST00000504409 MT-ATP8P03928 68 aa4.82□□□□□ -1.64
LINC02397-201ENST00000504409 UNQ6494/PRO21346Q6UXR6 183 aa4.82□□□□□ -1.64
LINC02397-201ENST00000504409 LST1O00453 97 aa4.81□□□□□ -1.64
LINC02397-201ENST00000504409 GATA3P23771 443 aa4.81□□□□□ -1.64
LINC02397-201ENST00000504409 HCP5Q6MZN7 132 aa4.81□□□□□ -1.64
LINC02397-201ENST00000504409 PYGO1Q9Y3Y4 419 aa4.81□□□□□ -1.64
LINC02397-201ENST00000504409 PPIFP30405 207 aaKnown RBP4.81□□□□□ -1.64
LINC02397-201ENST00000504409 IGKV1-27A0A075B6S5 117 aa4.81□□□□□ -1.64
LINC02397-201ENST00000504409 TRAV4A0A0B4J268 109 aa4.81□□□□□ -1.64
LINC02397-201ENST00000504409 PMS2P5A8MQ11 134 aa4.81□□□□□ -1.64
LINC02397-201ENST00000504409 TCL1BO95988 128 aa4.81□□□□□ -1.64
LINC02397-201ENST00000504409 ERC2-IT1O76042 136 aa4.81□□□□□ -1.64
LINC02397-201ENST00000504409 C15orf32Q32M92 178 aa4.81□□□□□ -1.64
LINC02397-201ENST00000504409 C5orf63A6NC05 138 aa4.81□□□□□ -1.64
LINC02397-201ENST00000504409 SEC61GP60059 68 aa4.81□□□□□ -1.64
LINC02397-201ENST00000504409 FAM110DQ8TAY7 271 aaPredicted RBP4.81□□□□□ -1.64
LINC02397-201ENST00000504409 LINC00574Q9H8X3 128 aa4.81□□□□□ -1.64
LINC02397-201ENST00000504409 C4orf51C9J302 202 aa4.81□□□□□ -1.64
LINC02397-201ENST00000504409 WFDC8Q8IUA0 241 aa4.81□□□□□ -1.64
LINC02397-201ENST00000504409 RNF185Q96GF1 192 aa4.81□□□□□ -1.64
LINC02397-201ENST00000504409 AGPAT4-IT1Q9H0P7 198 aa4.81□□□□□ -1.64
LINC02397-201ENST00000504409 FAM186AA6NE01 2351 aa4.81□□□□□ -1.64
LINC02397-201ENST00000504409 TRAV12-3A0A0B4J271 114 aa4.81□□□□□ -1.64
LINC02397-201ENST00000504409 H3BTX0 84 aa4.81□□□□□ -1.64
LINC02397-201ENST00000504409 CRLF1O75462 422 aa4.81□□□□□ -1.64
LINC02397-201ENST00000504409 GP9P14770 177 aa4.81□□□□□ -1.64
LINC02397-201ENST00000504409 C2orf91Q6ZV80 131 aa4.81□□□□□ -1.64
LINC02397-201ENST00000504409 IGKV1D-33P01593 117 aa4.81□□□□□ -1.64
LINC02397-201ENST00000504409 IGKV1-33P01594 117 aa4.81□□□□□ -1.64
LINC02397-201ENST00000504409 CCL17Q92583 94 aa4.81□□□□□ -1.64
LINC02397-201ENST00000504409 IGHV3-20A0A0C4DH32 117 aa4.8□□□□□ -1.64
LINC02397-201ENST00000504409 LINC00158P58513 81 aa4.8□□□□□ -1.64
LINC02397-201ENST00000504409 CDPF1Q6NVV7 123 aa4.8□□□□□ -1.64
LINC02397-201ENST00000504409 CXorf67Q86X51 503 aaPredicted RBP4.8□□□□□ -1.64
LINC02397-201ENST00000504409 GFRALQ6UXV0 394 aa4.8□□□□□ -1.64
LINC02397-201ENST00000504409 COX8CQ7Z4L0 72 aa4.8□□□□□ -1.64
LINC02397-201ENST00000504409 IMMP1LQ96LU5 166 aa4.8□□□□□ -1.64
LINC02397-201ENST00000504409 IGKV1-12A0A0C4DH73 117 aa4.8□□□□□ -1.64
LINC02397-201ENST00000504409 IGHV5-10-1A0A0J9YXX1 117 aa4.8□□□□□ -1.64
LINC02397-201ENST00000504409 IGKV1D-12P01611 117 aa4.8□□□□□ -1.64
LINC02397-201ENST00000504409 COX17Q14061 63 aa4.8□□□□□ -1.64
LINC02397-201ENST00000504409 ECSCRQ19T08 205 aa4.8□□□□□ -1.64
LINC02397-201ENST00000504409 FLVCR1-AS1Q8TAF5 88 aa4.8□□□□□ -1.64
LINC02397-201ENST00000504409 CYYR1Q96J86 154 aa4.8□□□□□ -1.64
LINC02397-201ENST00000504409 TMEM89A2RUT3 159 aa4.8□□□□□ -1.64
LINC02397-201ENST00000504409 K7ERJ3 54 aa4.8□□□□□ -1.64
LINC02397-201ENST00000504409 NDUFA4O00483 81 aa4.8□□□□□ -1.64
LINC02397-201ENST00000504409 DNAJC13O75165 2243 aa4.8□□□□□ -1.64
LINC02397-201ENST00000504409 HRKO00198 91 aa4.8□□□□□ -1.64
LINC02397-201ENST00000504409 APRG1Q8IVJ8 170 aa4.8□□□□□ -1.64
LINC02397-201ENST00000504409 SIT1Q9Y3P8 196 aa4.8□□□□□ -1.64
LINC02397-201ENST00000504409 IGHV4-4A0A075B6R2 117 aa4.8□□□□□ -1.64
LINC02397-201ENST00000504409 PFN2P35080 140 aa4.8□□□□□ -1.64
LINC02397-201ENST00000504409 ZMAT4Q9H898 229 aa4.8□□□□□ -1.64
LINC02397-201ENST00000504409 RNASE4P34096 147 aaKnown RBP4.8□□□□□ -1.64
LINC02397-201ENST00000504409 DSCR9P59020 149 aa4.8□□□□□ -1.64
LINC02397-201ENST00000504409 FAM216BQ8N7L0 139 aa4.8□□□□□ -1.64
LINC02397-201ENST00000504409 LIMD2Q9BT23 127 aa4.8□□□□□ -1.64
LINC02397-201ENST00000504409 TPRP12270 2363 aaKnown RBP4.79□□□□□ -1.64
LINC02397-201ENST00000504409 IGKV3-15P01624 115 aa4.79□□□□□ -1.64
LINC02397-201ENST00000504409 PCP2Q8IVA1 136 aa4.79□□□□□ -1.64
LINC02397-201ENST00000504409 DEFB108BQ8NET1 73 aa4.79□□□□□ -1.64
LINC02397-201ENST00000504409 ZNF318Q5VUA4 2279 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms