RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 F7P70375 446 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Nkx3-1P97436 237 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Gm9733Q1AN91 178 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Znf474Q6V5K9 347 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Olfr1434Q7TQR9 312 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Gm5148Q8BGG2 154 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 LiphQ8CIV3 451 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Olfr1370Q8VFG4 316 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Olfr1009Q8VFK1 314 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Plxdc1Q91ZV7 500 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 PifoQ9D9W1 207 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 PdfS4R2K0 231 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 PilraQ2YFS3 302 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Fam206aQ80ZQ9 193 aaKnown RBP9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Lax1Q8BHB3 407 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Klf11Q8K1S5 502 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Slc16a4Q8R0M8 500 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Olfr123Q8VFQ1 309 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Utp23Q9CX11 249 aaKnown RBP9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 H2al3Q9D4U4 128 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Olfr972Q9EQA2 314 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Psme4Q5SSW2 1843 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Trav5-1A0A075B5Z7 114 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 E430018J23RikE9PZQ8 461 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Hist1h2bfP10853 126 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Cd59bP58019 129 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Fgf11P70378 225 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Sfrp2P97299 295 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Rasl10bQ5SSG5 203 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Hist1h2bbQ64475 126 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Hist1h2bkQ8CGP1 126 aaKnown RBP9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Hist1h2bpQ8CGP2 126 aaKnown RBP9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Pkd1l2Q7TN88 2461 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Arfgef3Q3UGY8 2170 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Prss32E9Q409 334 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 G6pcP35576 357 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 V1rd19Q3KNP5 305 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Prdx2Q61171 198 aaKnown RBP9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Pafah1b2Q61206 229 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Fam222bQ6P539 562 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Tmprss11fQ8BHM9 439 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Fam214bQ8BR27 538 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Mrpl13Q9D1P0 178 aaKnown RBP9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Rnf7Q9WTZ1 113 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Lhx2Q9Z0S2 406 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Sdk2Q6V4S5 2176 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 StrcQ8VIM6 1809 aa9.95□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Fndc7A2AED3 737 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Gm10665K7N6B7 321 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Rab33bO35963 229 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Alox12bO70582 701 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Foxh1O88621 401 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 GlulP15105 373 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Trav15-1-dv6-1Q5R1D2 117 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Nanos1Q80WY3 267 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Olfr1012Q8VFJ7 311 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Ly96Q9JHF9 160 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 MyadmO35682 320 aaKnown RBP9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Cxcl10P17515 98 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Tpsb2P21845 276 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Supt4h1aP63271 117 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Rnf144bQ8BKD6 301 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Znrf1Q91V17 227 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Ubtd1Q91WB7 227 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Klf7Q99JB0 301 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Rab1bQ9D1G1 201 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Lime1Q9EQR5 269 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Tcrg-V5A0A0G2JGV5 113 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Olfr218E9PWV2 313 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Esp3J3QN49 87 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Gm21976J3QNN2 249 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Efna4O08542 206 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Psg27Q497W2 474 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Dtx2Q8R3P2 619 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Olfr76Q8VFV2 317 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Ramp3Q9WUP1 147 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 DeddQ9Z1L3 318 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Zswim8Q3UHH1 1832 aaKnown RBP9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Heatr5aQ5PRF0 2038 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Ly75Q60767 1723 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 C2cd4aE9Q861 334 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Col8a1Q00780 744 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Jsrp1Q3MI48 332 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Nrn1Q8CFV4 142 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Cyb5r3Q9DCN2 301 aaKnown RBP9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Trem3Q9JKE1 183 aa9.94□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Gm5741B2RVA4 72 aa9.93□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Plp1P60202 277 aa9.93□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Cma2Q91VB1 246 aa9.93□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Smim13E9Q942 88 aa9.93□□□□□ -0.82
Ndc1-204ENSMUST00000139560 BokO35425 213 aa9.93□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Fam3dP97805 223 aa9.93□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Prss44Q402U7 372 aa9.93□□□□□ -0.82
Ndc1-204ENSMUST00000139560 GalnsQ571E4 520 aa9.93□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Ifna11Q61716 190 aa9.93□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Cd200r5Q8BTP3 270 aa9.93□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Olfr1243Q8VGM7 305 aa9.93□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Gpr87Q99MT7 358 aa9.93□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Hyls1Q9CXX0 307 aa9.93□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Tmem170aQ9D342 144 aa9.93□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 37.9 ms