RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 PRELID3AQ96N28 172 aa0.41□□□□□ -2.34
SCARNA4-202ENST00000625402 LAMTOR2Q9Y2Q5 125 aa0.41□□□□□ -2.34
SCARNA4-202ENST00000625402 MED31Q9Y3C7 131 aa0.41□□□□□ -2.34
SCARNA4-202ENST00000625402 USP24Q9UPU5 2620 aa0.41□□□□□ -2.34
SCARNA4-202ENST00000625402 ADGBQ8N7X0 1667 aa0.4□□□□□ -2.34
SCARNA4-202ENST00000625402 ANKRD31Q8N7Z5 1873 aa0.4□□□□□ -2.35
SCARNA4-202ENST00000625402 TRBV27A0A0K0K1C4 114 aa0.4□□□□□ -2.35
SCARNA4-202ENST00000625402 C3orf85A0A1B0GTC6 90 aa0.4□□□□□ -2.35
SCARNA4-202ENST00000625402 ZNF727A8MUV8 499 aa0.4□□□□□ -2.35
SCARNA4-202ENST00000625402 H3BMG7 143 aa0.4□□□□□ -2.35
SCARNA4-202ENST00000625402 IFNA21P01568 189 aa0.4□□□□□ -2.35
SCARNA4-202ENST00000625402 TRACP01848 142 aa0.4□□□□□ -2.35
SCARNA4-202ENST00000625402 PDE6GP18545 87 aa0.4□□□□□ -2.35
SCARNA4-202ENST00000625402 RPS3P23396 243 aaKnown RBP eCLIP0.4□□□□□ -2.35
SCARNA4-202ENST00000625402 NEDD8Q15843 81 aa0.4□□□□□ -2.35
SCARNA4-202ENST00000625402 C5orf17Q8NAS9 161 aa0.4□□□□□ -2.35
SCARNA4-202ENST00000625402 OR4B1Q8NGF8 309 aa0.4□□□□□ -2.35
SCARNA4-202ENST00000625402 GRPEL2Q8TAA5 225 aa0.4□□□□□ -2.35
SCARNA4-202ENST00000625402 CLEC2BQ92478 149 aa0.4□□□□□ -2.35
SCARNA4-202ENST00000625402 MCEEQ96PE7 176 aa0.4□□□□□ -2.35
SCARNA4-202ENST00000625402 V9GYQ6 96 aa0.4□□□□□ -2.35
SCARNA4-202ENST00000625402 NCAPD3P42695 1498 aa0.4□□□□□ -2.35
SCARNA4-202ENST00000625402 NAV3Q8IVL0 2385 aa0.4□□□□□ -2.35
SCARNA4-202ENST00000625402 CACNA1EQ15878 2313 aa0.39□□□□□ -2.35
SCARNA4-202ENST00000625402 TRAV13-1A0A0B4J241 112 aa0.39□□□□□ -2.35
SCARNA4-202ENST00000625402 LOC107984156A0A0G2JMH3 177 aa0.39□□□□□ -2.35
SCARNA4-202ENST00000625402 A0A1B0GV72 72 aa0.39□□□□□ -2.35
SCARNA4-202ENST00000625402 NUPR2A6NF83 97 aa0.39□□□□□ -2.35
SCARNA4-202ENST00000625402 NEFHP12036 1026 aa0.39□□□□□ -2.35
SCARNA4-202ENST00000625402 SLC25A4P12235 298 aa0.39□□□□□ -2.35
SCARNA4-202ENST00000625402 TMEM128Q5BJH2 165 aa0.39□□□□□ -2.35
SCARNA4-202ENST00000625402 CSAG1Q6PB30 78 aa0.39□□□□□ -2.35
SCARNA4-202ENST00000625402 ARL17AQ8IVW1 177 aa0.39□□□□□ -2.35
SCARNA4-202ENST00000625402 CCL19Q99731 98 aa0.39□□□□□ -2.35
SCARNA4-202ENST00000625402 CENPHQ9H3R5 247 aa0.39□□□□□ -2.35
SCARNA4-202ENST00000625402 C10orf95Q9H7T3 257 aa0.39□□□□□ -2.35
SCARNA4-202ENST00000625402 CBLN4Q9NTU7 201 aa0.39□□□□□ -2.35
SCARNA4-202ENST00000625402 HSPB8Q9UJY1 196 aa0.39□□□□□ -2.35
SCARNA4-202ENST00000625402 PBRM1Q86U86 1689 aa0.39□□□□□ -2.35
SCARNA4-202ENST00000625402 KIAA1107Q9UPP5 1409 aa0.38□□□□□ -2.35
SCARNA4-202ENST00000625402 FER1L6Q2WGJ9 1857 aa0.38□□□□□ -2.35
SCARNA4-202ENST00000625402 TRBV7-6A0A0J9YX20 115 aa0.38□□□□□ -2.35
SCARNA4-202ENST00000625402 TRBV30A0A0K0K1B3 111 aa0.38□□□□□ -2.35
SCARNA4-202ENST00000625402 C5orf58C9J3I9 102 aa0.38□□□□□ -2.35
SCARNA4-202ENST00000625402 E7EQ34 232 aa0.38□□□□□ -2.35
SCARNA4-202ENST00000625402 M0QZK8 103 aa0.38□□□□□ -2.35
SCARNA4-202ENST00000625402 IGHV3-30P01768 117 aa0.38□□□□□ -2.35
SCARNA4-202ENST00000625402 IGHV3-30-5P0DP03 117 aa0.38□□□□□ -2.35
SCARNA4-202ENST00000625402 TPT1P13693 172 aaKnown RBP0.38□□□□□ -2.35
SCARNA4-202ENST00000625402 NDUFA6P56556 154 aa0.38□□□□□ -2.35
SCARNA4-202ENST00000625402 MAXP61244 160 aa0.38□□□□□ -2.35
SCARNA4-202ENST00000625402 CASC2Q6XLA1 102 aa0.38□□□□□ -2.35
SCARNA4-202ENST00000625402 LINC00299Q6ZSB3 139 aa0.38□□□□□ -2.35
SCARNA4-202ENST00000625402 Q86TA4 180 aa0.38□□□□□ -2.35
SCARNA4-202ENST00000625402 MORN4Q8NDC4 146 aa0.38□□□□□ -2.35
SCARNA4-202ENST00000625402 OR5AK2Q8NH90 309 aa0.38□□□□□ -2.35
SCARNA4-202ENST00000625402 PLAC4Q8WY50 150 aa0.38□□□□□ -2.35
SCARNA4-202ENST00000625402 CCDC115Q96NT0 180 aa0.38□□□□□ -2.35
SCARNA4-202ENST00000625402 LXNQ9BS40 222 aa0.38□□□□□ -2.35
SCARNA4-202ENST00000625402 FAM135BQ49AJ0 1406 aa0.38□□□□□ -2.35
SCARNA4-202ENST00000625402 PIK3C2AO00443 1686 aa0.37□□□□□ -2.35
SCARNA4-202ENST00000625402 LOC107984640A0A0U1RRK4 108 aa0.37□□□□□ -2.35
SCARNA4-202ENST00000625402 CRYGSP22914 178 aa0.37□□□□□ -2.35
SCARNA4-202ENST00000625402 RPL37AP61513 92 aaKnown RBP0.37□□□□□ -2.35
SCARNA4-202ENST00000625402 BLCAPP62952 87 aa0.37□□□□□ -2.35
SCARNA4-202ENST00000625402 QRFPP83859 136 aa0.37□□□□□ -2.35
SCARNA4-202ENST00000625402 TFAMQ00059 246 aaKnown RBP0.37□□□□□ -2.35
SCARNA4-202ENST00000625402 SPINK9Q5DT21 86 aa0.37□□□□□ -2.35
SCARNA4-202ENST00000625402 Q6ZQY7 126 aa0.37□□□□□ -2.35
SCARNA4-202ENST00000625402 TMEM229BQ8NBD8 167 aa0.37□□□□□ -2.35
SCARNA4-202ENST00000625402 OR9Q1Q8NGQ5 310 aa0.37□□□□□ -2.35
SCARNA4-202ENST00000625402 CIB3Q96Q77 187 aaPredicted RBP0.37□□□□□ -2.35
SCARNA4-202ENST00000625402 DDA1Q9BW61 102 aa0.37□□□□□ -2.35
SCARNA4-202ENST00000625402 LPAR5Q9H1C0 372 aa0.37□□□□□ -2.35
SCARNA4-202ENST00000625402 BOKQ9UMX3 212 aaPredicted RBP0.37□□□□□ -2.35
SCARNA4-202ENST00000625402 NDUFAF1Q9Y375 327 aa0.37□□□□□ -2.35
SCARNA4-202ENST00000625402 ABCA1O95477 2261 aa0.37□□□□□ -2.35
SCARNA4-202ENST00000625402 ABCA4P78363 2273 aa0.37□□□□□ -2.35
SCARNA4-202ENST00000625402 TRPM7Q96QT4 1865 aa0.37□□□□□ -2.35
SCARNA4-202ENST00000625402 PRORSD1PA6NEY8 169 aa0.36□□□□□ -2.35
SCARNA4-202ENST00000625402 A6NN06 94 aa0.36□□□□□ -2.35
SCARNA4-202ENST00000625402 SAA1P0DJI8 122 aaPredicted RBP0.36□□□□□ -2.35
SCARNA4-202ENST00000625402 KRTAP21-1Q3LI58 79 aa0.36□□□□□ -2.35
SCARNA4-202ENST00000625402 IZUMO2Q6UXV1 221 aa0.36□□□□□ -2.35
SCARNA4-202ENST00000625402 ATOH7Q8N100 152 aa0.36□□□□□ -2.35
SCARNA4-202ENST00000625402 SELENOSQ9BQE4 189 aa0.36□□□□□ -2.35
SCARNA4-202ENST00000625402 COMMD3Q9UBI1 195 aa0.36□□□□□ -2.35
SCARNA4-202ENST00000625402 MPC1Q9Y5U8 109 aa0.36□□□□□ -2.35
SCARNA4-202ENST00000625402 DLC1Q96QB1 1528 aa0.36□□□□□ -2.35
SCARNA4-202ENST00000625402 CTTNBP2Q8WZ74 1663 aa0.36□□□□□ -2.35
SCARNA4-202ENST00000625402 SPAG17Q6Q759 2223 aa0.36□□□□□ -2.35
SCARNA4-202ENST00000625402 TCOF1Q13428 1488 aaKnown RBP0.35□□□□□ -2.35
SCARNA4-202ENST00000625402 ANK1P16157 1881 aa0.35□□□□□ -2.35
SCARNA4-202ENST00000625402 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.35□□□□□ -2.35
SCARNA4-202ENST00000625402 RPL22P35268 128 aaKnown RBP0.35□□□□□ -2.35
SCARNA4-202ENST00000625402 B2MP61769 119 aa0.35□□□□□ -2.35
SCARNA4-202ENST00000625402 SAMD13Q5VXD3 122 aa0.35□□□□□ -2.35
SCARNA4-202ENST00000625402 SPATA8Q6RVD6 105 aa0.35□□□□□ -2.35
SCARNA4-202ENST00000625402 TOMM20LQ6UXN7 152 aa0.35□□□□□ -2.35
SCARNA4-202ENST00000625402 OR51A4Q8NGJ6 313 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms