RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 LY96Q9Y6Y9 160 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 FN1P02751 2386 aaKnown RBP4.72□□□□□ -1.65
PTPRM-213ENST00000580949 TGIF2-C20orf24A0A0A6YYL0 155 aa4.71□□□□□ -1.66
PTPRM-213ENST00000580949 IGHV7-4-1A0A0J9YVY3 117 aa4.71□□□□□ -1.66
PTPRM-213ENST00000580949 ZNF705FA8MVS1 300 aaPredicted RBP4.71□□□□□ -1.66
PTPRM-213ENST00000580949 PRAC2D3DTV9 90 aa4.71□□□□□ -1.66
PTPRM-213ENST00000580949 K7EMT4 169 aa4.71□□□□□ -1.66
PTPRM-213ENST00000580949 CHEK1O14757 476 aa4.71□□□□□ -1.66
PTPRM-213ENST00000580949 ZNF253O75346 499 aa4.71□□□□□ -1.66
PTPRM-213ENST00000580949 GCGP01275 180 aa4.71□□□□□ -1.66
PTPRM-213ENST00000580949 LTAP01374 205 aa4.71□□□□□ -1.66
PTPRM-213ENST00000580949 PFN1P07737 140 aaKnown RBP4.71□□□□□ -1.66
PTPRM-213ENST00000580949 CXCL1P09341 107 aa4.71□□□□□ -1.66
PTPRM-213ENST00000580949 GALR1P47211 349 aa4.71□□□□□ -1.66
PTPRM-213ENST00000580949 CDX1P47902 265 aaPredicted RBP4.71□□□□□ -1.66
PTPRM-213ENST00000580949 KLF5Q13887 457 aaPredicted RBP4.71□□□□□ -1.66
PTPRM-213ENST00000580949 PDE6HQ13956 83 aa4.71□□□□□ -1.66
PTPRM-213ENST00000580949 ELOBQ15370 118 aa4.71□□□□□ -1.66
PTPRM-213ENST00000580949 DEFB136Q30KP8 78 aa4.71□□□□□ -1.66
PTPRM-213ENST00000580949 FAM106AQ4KMX7 169 aa4.71□□□□□ -1.66
PTPRM-213ENST00000580949 ADAMTSL5Q6ZMM2 481 aa4.71□□□□□ -1.66
PTPRM-213ENST00000580949 RNF182Q8N6D2 247 aa4.71□□□□□ -1.66
PTPRM-213ENST00000580949 C15orf54Q8N8G6 183 aa4.71□□□□□ -1.66
PTPRM-213ENST00000580949 LINC01006Q8NI28 216 aa4.71□□□□□ -1.66
PTPRM-213ENST00000580949 ZNF418Q8TF45 676 aaPredicted RBP4.71□□□□□ -1.66
PTPRM-213ENST00000580949 GPR82Q96P67 336 aa4.71□□□□□ -1.66
PTPRM-213ENST00000580949 RHPN1-AS1Q9BWJ2 59 aa4.71□□□□□ -1.66
PTPRM-213ENST00000580949 ZNF331Q9NQX6 463 aaPredicted RBP4.71□□□□□ -1.66
PTPRM-213ENST00000580949 URGCP-MRPS24S4R325 110 aa4.71□□□□□ -1.66
PTPRM-213ENST00000580949 SETD2Q9BYW2 2564 aaPredicted RBP4.71□□□□□ -1.66
PTPRM-213ENST00000580949 TRBV6-1A0A0K0K1D8 114 aa4.7□□□□□ -1.66
PTPRM-213ENST00000580949 TMEM213A2RRL7 107 aa4.7□□□□□ -1.66
PTPRM-213ENST00000580949 CXorf65A6NEN9 183 aa4.7□□□□□ -1.66
PTPRM-213ENST00000580949 H7BYZ3 331 aa4.7□□□□□ -1.66
PTPRM-213ENST00000580949 SOCS3O14543 225 aa4.7□□□□□ -1.66
PTPRM-213ENST00000580949 NDUFA7O95182 113 aa4.7□□□□□ -1.66
PTPRM-213ENST00000580949 CRYBA1P05813 215 aa4.7□□□□□ -1.66
PTPRM-213ENST00000580949 S100A9P06702 114 aaKnown RBP4.7□□□□□ -1.66
PTPRM-213ENST00000580949 CD28P10747 220 aa4.7□□□□□ -1.66
PTPRM-213ENST00000580949 RAB5AP20339 215 aa4.7□□□□□ -1.66
PTPRM-213ENST00000580949 S100A7P31151 101 aa4.7□□□□□ -1.66
PTPRM-213ENST00000580949 HOXD3P31249 432 aaPredicted RBP4.7□□□□□ -1.66
PTPRM-213ENST00000580949 SYNJ2BPP57105 145 aa4.7□□□□□ -1.66
PTPRM-213ENST00000580949 PSG9Q00887 426 aa4.7□□□□□ -1.66
PTPRM-213ENST00000580949 SCGB2A2Q13296 93 aa4.7□□□□□ -1.66
PTPRM-213ENST00000580949 RPEL1Q2QD12 228 aa4.7□□□□□ -1.66
PTPRM-213ENST00000580949 LCN12Q6JVE5 192 aa4.7□□□□□ -1.66
PTPRM-213ENST00000580949 LINC00322Q6ZN03 302 aaPredicted RBP4.7□□□□□ -1.66
PTPRM-213ENST00000580949 C11orf44Q8N8P7 122 aa4.7□□□□□ -1.66
PTPRM-213ENST00000580949 OR10G8Q8NGN5 311 aa4.7□□□□□ -1.66
PTPRM-213ENST00000580949 CMTM2Q8TAZ6 248 aa4.7□□□□□ -1.66
PTPRM-213ENST00000580949 SFRP2Q96HF1 295 aa4.7□□□□□ -1.66
PTPRM-213ENST00000580949 DUX3Q96PT4 197 aa4.7□□□□□ -1.66
PTPRM-213ENST00000580949 VGLL1Q99990 258 aa4.7□□□□□ -1.66
PTPRM-213ENST00000580949 RNASE7Q9H1E1 156 aaKnown RBP4.7□□□□□ -1.66
PTPRM-213ENST00000580949 DAZ1Q9NQZ3 744 aaKnown RBP4.7□□□□□ -1.66
PTPRM-213ENST00000580949 V9GYV3 84 aa4.7□□□□□ -1.66
PTPRM-213ENST00000580949 NSD1Q96L73 2696 aaPredicted RBP4.69□□□□□ -1.66
PTPRM-213ENST00000580949 IGKV2-40A0A087WW87 121 aaPredicted RBP4.69□□□□□ -1.66
PTPRM-213ENST00000580949 LGALS9O00182 355 aa4.69□□□□□ -1.66
PTPRM-213ENST00000580949 CRLF1O75462 422 aa4.69□□□□□ -1.66
PTPRM-213ENST00000580949 IGKV2D-40P01614 121 aaPredicted RBP4.69□□□□□ -1.66
PTPRM-213ENST00000580949 MGST1P10620 155 aaKnown RBP4.69□□□□□ -1.66
PTPRM-213ENST00000580949 KRTAP10-3P60369 221 aa4.69□□□□□ -1.66
PTPRM-213ENST00000580949 ERCC8Q13216 396 aa4.69□□□□□ -1.66
PTPRM-213ENST00000580949 PSG3Q16557 428 aa4.69□□□□□ -1.66
PTPRM-213ENST00000580949 PRNTQ86SH4 94 aa4.69□□□□□ -1.66
PTPRM-213ENST00000580949 Q86TA4 180 aa4.69□□□□□ -1.66
PTPRM-213ENST00000580949 ARL6IP6Q8N6S5 226 aa4.69□□□□□ -1.66
PTPRM-213ENST00000580949 TMEM75Q8N9X5 138 aa4.69□□□□□ -1.66
PTPRM-213ENST00000580949 OR1N2Q8NGR9 330 aa4.69□□□□□ -1.66
PTPRM-213ENST00000580949 C4orf3Q8WVX3 66 aa4.69□□□□□ -1.66
PTPRM-213ENST00000580949 FMC1Q96HJ9 113 aa4.69□□□□□ -1.66
PTPRM-213ENST00000580949 CITED2Q99967 270 aaPredicted RBP4.69□□□□□ -1.66
PTPRM-213ENST00000580949 PYGO2Q9BRQ0 406 aa4.69□□□□□ -1.66
PTPRM-213ENST00000580949 AAMDCQ9H7C9 122 aa4.69□□□□□ -1.66
PTPRM-213ENST00000580949 OSTCQ9NRP0 149 aa4.69□□□□□ -1.66
PTPRM-213ENST00000580949 PSG8Q9UQ74 426 aa4.69□□□□□ -1.66
PTPRM-213ENST00000580949 UFC1Q9Y3C8 167 aa4.69□□□□□ -1.66
PTPRM-213ENST00000580949 BAHCC1Q9P281 2608 aa4.68□□□□□ -1.66
PTPRM-213ENST00000580949 SETXQ7Z333 2677 aaKnown RBP4.68□□□□□ -1.66
PTPRM-213ENST00000580949 TRBV24-1A0A075B6N3 115 aa4.68□□□□□ -1.66
PTPRM-213ENST00000580949 A0A1W2PS18 150 aa4.68□□□□□ -1.66
PTPRM-213ENST00000580949 C2orf70A6NJV1 201 aa4.68□□□□□ -1.66
PTPRM-213ENST00000580949 A8MWP6 167 aa4.68□□□□□ -1.66
PTPRM-213ENST00000580949 LINC01619G3V211 115 aa4.68□□□□□ -1.66
PTPRM-213ENST00000580949 PPP1R2P9O14990 202 aa4.68□□□□□ -1.66
PTPRM-213ENST00000580949 FRMD6-AS1P0C7T7 363 aa4.68□□□□□ -1.66
PTPRM-213ENST00000580949 FOLR2P14207 255 aa4.68□□□□□ -1.66
PTPRM-213ENST00000580949 CBLN1P23435 193 aa4.68□□□□□ -1.66
PTPRM-213ENST00000580949 CSN1S1P47710 185 aa4.68□□□□□ -1.66
PTPRM-213ENST00000580949 CRIP1P50238 77 aa4.68□□□□□ -1.66
PTPRM-213ENST00000580949 PROK1P58294 105 aa4.68□□□□□ -1.66
PTPRM-213ENST00000580949 FAM3BP58499 235 aaPredicted RBP4.68□□□□□ -1.66
PTPRM-213ENST00000580949 TIRAPP58753 221 aa4.68□□□□□ -1.66
PTPRM-213ENST00000580949 DEFB1P60022 68 aa4.68□□□□□ -1.66
PTPRM-213ENST00000580949 ERVFC1-1P60608 527 aa4.68□□□□□ -1.66
PTPRM-213ENST00000580949 UBE2G1P62253 170 aa4.68□□□□□ -1.66
PTPRM-213ENST00000580949 FLI1Q01543 452 aaPredicted RBP4.68□□□□□ -1.66
PTPRM-213ENST00000580949 TCF24Q7RTU0 167 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms