RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 GATA3P23771 443 aa9.54□□□□□ -0.88
VDR-208ENST00000550325 DEFB104AQ8WTQ1 72 aa9.54□□□□□ -0.88
VDR-208ENST00000550325 PHLDA1Q8WV24 401 aaPredicted RBP9.54□□□□□ -0.88
VDR-208ENST00000550325 PLSCR4Q9NRQ2 329 aa9.54□□□□□ -0.88
VDR-208ENST00000550325 HHLA3Q9XRX5 114 aa9.54□□□□□ -0.88
VDR-208ENST00000550325 EFNA4P52798 201 aa9.54□□□□□ -0.88
VDR-208ENST00000550325 SIGLEC15Q6ZMC9 328 aa9.54□□□□□ -0.88
VDR-208ENST00000550325 IGFBPL1Q8WX77 278 aa9.54□□□□□ -0.88
VDR-208ENST00000550325 RNF183Q96D59 192 aa9.54□□□□□ -0.88
VDR-208ENST00000550325 ANAPC13Q9BS18 74 aa9.54□□□□□ -0.88
VDR-208ENST00000550325 NDUFB3O43676 98 aa9.53□□□□□ -0.88
VDR-208ENST00000550325 RRN3P1Q2M238 152 aa9.53□□□□□ -0.88
VDR-208ENST00000550325 HOXA3O43365 443 aaPredicted RBP9.53□□□□□ -0.88
VDR-208ENST00000550325 GLRXP35754 106 aa9.53□□□□□ -0.88
VDR-208ENST00000550325 ZNF71Q9NQZ8 489 aaPredicted RBP9.53□□□□□ -0.88
VDR-208ENST00000550325 ATRXP46100 2492 aa9.53□□□□□ -0.88
VDR-208ENST00000550325 SPENQ96T58 3664 aaKnown RBP9.53□□□□□ -0.88
VDR-208ENST00000550325 HIGD1BQ9P298 99 aa9.53□□□□□ -0.88
VDR-208ENST00000550325 IGLV1-44P01699 117 aa9.52□□□□□ -0.88
VDR-208ENST00000550325 HLA-DMBP28068 263 aa9.52□□□□□ -0.88
VDR-208ENST00000550325 LYPD2Q6UXB3 125 aa9.52□□□□□ -0.88
VDR-208ENST00000550325 ZNF493Q6ZR52 646 aa9.52□□□□□ -0.88
VDR-208ENST00000550325 RNF125Q96EQ8 232 aa9.52□□□□□ -0.88
VDR-208ENST00000550325 SLC25A15Q9Y619 301 aa9.52□□□□□ -0.88
VDR-208ENST00000550325 TMEM238LA0A1B0GVL6 79 aa9.52□□□□□ -0.89
VDR-208ENST00000550325 OR11H12B2RN74 326 aa9.52□□□□□ -0.89
VDR-208ENST00000550325 ARL3P36405 182 aa9.52□□□□□ -0.89
VDR-208ENST00000550325 OR11H1Q8NG94 326 aa9.52□□□□□ -0.89
VDR-208ENST00000550325 OR11H2Q8NH07 326 aa9.52□□□□□ -0.89
VDR-208ENST00000550325 SCGB1C2P0DMR2 95 aa9.52□□□□□ -0.89
VDR-208ENST00000550325 FOXI1Q12951 378 aa9.52□□□□□ -0.89
VDR-208ENST00000550325 LINC01549A6NIU2 74 aa9.51□□□□□ -0.89
VDR-208ENST00000550325 J3KRW8 73 aa9.51□□□□□ -0.89
VDR-208ENST00000550325 OVOL3O00110 214 aa9.51□□□□□ -0.89
VDR-208ENST00000550325 TM2D2Q9BX73 214 aa9.51□□□□□ -0.89
VDR-208ENST00000550325 IGKV1-17P01599 117 aa9.51□□□□□ -0.89
VDR-208ENST00000550325 CRYGCP07315 174 aa9.51□□□□□ -0.89
VDR-208ENST00000550325 TCTEX1D4Q5JR98 221 aa9.51□□□□□ -0.89
VDR-208ENST00000550325 C1orf162Q8NEQ5 155 aaPredicted RBP9.51□□□□□ -0.89
VDR-208ENST00000550325 ZNF502Q8TBZ5 544 aa9.51□□□□□ -0.89
VDR-208ENST00000550325 VKORC1Q9BQB6 163 aa9.51□□□□□ -0.89
VDR-208ENST00000550325 SHANK2-AS3Q9BTD1 123 aa9.51□□□□□ -0.89
VDR-208ENST00000550325 MED13LQ71F56 2210 aa9.51□□□□□ -0.89
VDR-208ENST00000550325 MALRD1Q5VYJ5 2156 aa9.51□□□□□ -0.89
VDR-208ENST00000550325 SMG1Q96Q15 3661 aaKnown RBP9.51□□□□□ -0.89
VDR-208ENST00000550325 ZNF80P51504 273 aaPredicted RBP9.51□□□□□ -0.89
VDR-208ENST00000550325 PPP1R27Q86WC6 154 aa9.51□□□□□ -0.89
VDR-208ENST00000550325 ATP5LO75964 103 aa9.5□□□□□ -0.89
VDR-208ENST00000550325 NXT2Q9NPJ8 142 aaKnown RBP9.5□□□□□ -0.89
VDR-208ENST00000550325 KALRNO60229 2985 aa9.5□□□□□ -0.89
VDR-208ENST00000550325 A0A1W2PNU3 283 aaPredicted RBP9.5□□□□□ -0.89
VDR-208ENST00000550325 B5MCH6 92 aa9.5□□□□□ -0.89
VDR-208ENST00000550325 ERCC8Q13216 396 aa9.5□□□□□ -0.89
VDR-208ENST00000550325 HIF1ANQ9NWT6 349 aa9.5□□□□□ -0.89
VDR-208ENST00000550325 TMEM14CQ9P0S9 112 aa9.5□□□□□ -0.89
VDR-208ENST00000550325 SIGLEC9Q9Y336 463 aa9.5□□□□□ -0.89
VDR-208ENST00000550325 U3KQK5 164 aa9.5□□□□□ -0.89
VDR-208ENST00000550325 ANKRD11Q6UB99 2663 aaPredicted RBP9.5□□□□□ -0.89
VDR-208ENST00000550325 IGHV3OR16-13A0A075B7E8 117 aa9.5□□□□□ -0.89
VDR-208ENST00000550325 IGHV3-74A0A0B4J1X5 117 aa9.5□□□□□ -0.89
VDR-208ENST00000550325 HLA-DRB4P13762 266 aa9.5□□□□□ -0.89
VDR-208ENST00000550325 HLA-DRB4X5D2U9 266 aa9.5□□□□□ -0.89
VDR-208ENST00000550325 PRSS29PA6NIE9 313 aa9.5□□□□□ -0.89
VDR-208ENST00000550325 H7C2G1 150 aa9.5□□□□□ -0.89
VDR-208ENST00000550325 WT1P19544 449 aaPredicted RBP9.5□□□□□ -0.89
VDR-208ENST00000550325 XGP55808 180 aa9.5□□□□□ -0.89
VDR-208ENST00000550325 RAI1Q7Z5J4 1906 aaPredicted RBP9.49□□□□□ -0.89
VDR-208ENST00000550325 FAM27E3Q08E93 113 aa9.49□□□□□ -0.89
VDR-208ENST00000550325 HES1Q14469 280 aa9.49□□□□□ -0.89
VDR-208ENST00000550325 ZFP2Q6ZN57 461 aa9.49□□□□□ -0.89
VDR-208ENST00000550325 C1QTNF4Q9BXJ3 329 aa9.49□□□□□ -0.89
VDR-208ENST00000550325 IGHV3-66A0A0C4DH42 116 aa9.49□□□□□ -0.89
VDR-208ENST00000550325 SRSF6Q13247 344 aaKnown RBP9.49□□□□□ -0.89
VDR-208ENST00000550325 DLX4Q92988 240 aaPredicted RBP9.49□□□□□ -0.89
VDR-208ENST00000550325 PRR25Q96S07 402 aa9.49□□□□□ -0.89
VDR-208ENST00000550325 NOTCH2Q04721 2471 aa9.49□□□□□ -0.89
VDR-208ENST00000550325 SPRY2O43597 315 aa9.49□□□□□ -0.89
VDR-208ENST00000550325 C3orf36Q3SXR2 165 aa9.49□□□□□ -0.89
VDR-208ENST00000550325 INS-IGF2F8WCM5 200 aa9.48□□□□□ -0.89
VDR-208ENST00000550325 PRTN3P24158 256 aa9.48□□□□□ -0.89
VDR-208ENST00000550325 FDCSPQ8NFU4 85 aa9.48□□□□□ -0.89
VDR-208ENST00000550325 NFE4Q86UQ8 179 aa9.48□□□□□ -0.89
VDR-208ENST00000550325 DTX2Q86UW9 622 aa9.48□□□□□ -0.89
VDR-208ENST00000550325 ZNF491Q8N8L2 437 aa9.48□□□□□ -0.89
VDR-208ENST00000550325 RAXQ9Y2V3 346 aa9.48□□□□□ -0.89
VDR-208ENST00000550325 LINC01548A6NM66 108 aa9.48□□□□□ -0.89
VDR-208ENST00000550325 H3BRN7 92 aa9.48□□□□□ -0.89
VDR-208ENST00000550325 EMP1P54849 157 aa9.48□□□□□ -0.89
VDR-208ENST00000550325 Q6ZUT4 128 aa9.48□□□□□ -0.89
VDR-208ENST00000550325 KIR2DL4Q99706 377 aa9.47□□□□□ -0.89
VDR-208ENST00000550325 TACC2O95359 2948 aa9.47□□□□□ -0.89
VDR-208ENST00000550325 ZFYVE26Q68DK2 2539 aa9.47□□□□□ -0.89
VDR-208ENST00000550325 FAM90A27PA6NNH2 459 aa9.47□□□□□ -0.89
VDR-208ENST00000550325 ZNF815PA8K554 130 aa9.47□□□□□ -0.89
VDR-208ENST00000550325 TRGV3P03979 118 aa9.47□□□□□ -0.89
VDR-208ENST00000550325 RNF185Q96GF1 192 aa9.47□□□□□ -0.89
VDR-208ENST00000550325 FAM208BQ5VWN6 2430 aa9.47□□□□□ -0.89
VDR-208ENST00000550325 LAGE3Q14657 143 aa9.47□□□□□ -0.89
VDR-208ENST00000550325 TMEM30BQ3MIR4 351 aa9.47□□□□□ -0.89
VDR-208ENST00000550325 SPANXN1Q5VSR9 72 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms