RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 D6R8Y8 96 aa13.62□□□□□ -0.23
SCARB1-208ENST00000544327 ERCC8Q13216 396 aa13.62□□□□□ -0.23
SCARB1-208ENST00000544327 MRPL51Q4U2R6 128 aaKnown RBP13.62□□□□□ -0.23
SCARB1-208ENST00000544327 AMN1Q8IY45 258 aa13.62□□□□□ -0.23
SCARB1-208ENST00000544327 OR10AG1Q8NH19 301 aa13.62□□□□□ -0.23
SCARB1-208ENST00000544327 PRSS3P2Q8NHM4 247 aa13.62□□□□□ -0.23
SCARB1-208ENST00000544327 PRELID3AQ96N28 172 aa13.62□□□□□ -0.23
SCARB1-208ENST00000544327 TRAV40A0A0B4J280 105 aa13.62□□□□□ -0.23
SCARB1-208ENST00000544327 H3BUA1 57 aa13.62□□□□□ -0.23
SCARB1-208ENST00000544327 COL5A1-AS1Q5SY13 56 aa13.62□□□□□ -0.23
SCARB1-208ENST00000544327 LINC01545Q5VT33 79 aa13.62□□□□□ -0.23
SCARB1-208ENST00000544327 LAMTOR2Q9Y2Q5 125 aa13.62□□□□□ -0.23
SCARB1-208ENST00000544327 IGHV3OR16-10A0A075B7F0 116 aa13.61□□□□□ -0.23
SCARB1-208ENST00000544327 TMEM8BA6NDV4 472 aa13.61□□□□□ -0.23
SCARB1-208ENST00000544327 HIST1H1AQ02539 215 aaPredicted RBP13.61□□□□□ -0.23
SCARB1-208ENST00000544327 RNF182Q8N6D2 247 aa13.61□□□□□ -0.23
SCARB1-208ENST00000544327 ZNF747Q9BV97 191 aa13.61□□□□□ -0.23
SCARB1-208ENST00000544327 SIGLEC8Q9NYZ4 499 aa13.61□□□□□ -0.23
SCARB1-208ENST00000544327 CLEC2AQ6UVW9 174 aa13.6□□□□□ -0.23
SCARB1-208ENST00000544327 C8orf86Q6ZUL3 223 aa13.6□□□□□ -0.23
SCARB1-208ENST00000544327 AGPAT4-IT1Q9H0P7 198 aa13.6□□□□□ -0.23
SCARB1-208ENST00000544327 IGHV3-66A0A0C4DH42 116 aa13.6□□□□□ -0.23
SCARB1-208ENST00000544327 A6NDX4 124 aa13.6□□□□□ -0.23
SCARB1-208ENST00000544327 ORM1P02763 201 aa13.6□□□□□ -0.23
SCARB1-208ENST00000544327 TRGV3P03979 118 aa13.6□□□□□ -0.23
SCARB1-208ENST00000544327 IFI27P40305 119 aaPredicted RBP13.6□□□□□ -0.23
SCARB1-208ENST00000544327 TWIST1Q15672 202 aa13.6□□□□□ -0.23
SCARB1-208ENST00000544327 BRD3OSQ6XYD6 125 aa13.6□□□□□ -0.23
SCARB1-208ENST00000544327 C9orf47Q6ZRZ4 202 aa13.6□□□□□ -0.23
SCARB1-208ENST00000544327 IL17RELQ6ZVW7 336 aa13.6□□□□□ -0.23
SCARB1-208ENST00000544327 GLMPQ8WWB7 406 aa13.6□□□□□ -0.23
SCARB1-208ENST00000544327 SPTBN4Q9H254 2564 aa13.59□□□□□ -0.23
SCARB1-208ENST00000544327 IGHG2P01859 326 aa13.59□□□□□ -0.23
SCARB1-208ENST00000544327 ABCA2Q9BZC7 2435 aa13.58□□□□□ -0.23
SCARB1-208ENST00000544327 A0A096LNJ9 63 aa13.58□□□□□ -0.24
SCARB1-208ENST00000544327 ARL3P36405 182 aa13.58□□□□□ -0.24
SCARB1-208ENST00000544327 BATFQ16520 125 aa13.58□□□□□ -0.24
SCARB1-208ENST00000544327 USMG5Q96IX5 58 aa13.58□□□□□ -0.24
SCARB1-208ENST00000544327 NPFFR1Q9GZQ6 430 aa13.58□□□□□ -0.24
SCARB1-208ENST00000544327 MS4A6AQ9H2W1 248 aa13.58□□□□□ -0.24
SCARB1-208ENST00000544327 NDUFA4O00483 81 aa13.57□□□□□ -0.24
SCARB1-208ENST00000544327 PPBPP02775 128 aa13.57□□□□□ -0.24
SCARB1-208ENST00000544327 IGHV4-38-2P0DP08 117 aa13.57□□□□□ -0.24
SCARB1-208ENST00000544327 PPIFP30405 207 aaKnown RBP13.57□□□□□ -0.24
SCARB1-208ENST00000544327 GAGE1Q13065 139 aa13.57□□□□□ -0.24
SCARB1-208ENST00000544327 TMEM78Q5T7P6 136 aa13.57□□□□□ -0.24
SCARB1-208ENST00000544327 C9orf139Q6ZV77 190 aa13.57□□□□□ -0.24
SCARB1-208ENST00000544327 RNF185Q96GF1 192 aa13.57□□□□□ -0.24
SCARB1-208ENST00000544327 IGHV4-30-2A0A087WSY4 118 aa13.57□□□□□ -0.24
SCARB1-208ENST00000544327 LINC01546A6NGU7 62 aa13.57□□□□□ -0.24
SCARB1-208ENST00000544327 ZNF207O43670 478 aaKnown RBP13.57□□□□□ -0.24
SCARB1-208ENST00000544327 ATP5J2P56134 94 aa13.57□□□□□ -0.24
SCARB1-208ENST00000544327 IGHV3OR16-13A0A075B7E8 117 aa13.56□□□□□ -0.24
SCARB1-208ENST00000544327 IGHV3-74A0A0B4J1X5 117 aa13.56□□□□□ -0.24
SCARB1-208ENST00000544327 HSBP1L1C9JCN9 74 aa13.56□□□□□ -0.24
SCARB1-208ENST00000544327 MSMBP08118 114 aa13.56□□□□□ -0.24
SCARB1-208ENST00000544327 CKS2P33552 79 aa13.56□□□□□ -0.24
SCARB1-208ENST00000544327 LENEPQ9Y5L5 61 aa13.56□□□□□ -0.24
SCARB1-208ENST00000544327 MED13LQ71F56 2210 aa13.56□□□□□ -0.24
SCARB1-208ENST00000544327 IGHV3-49A0A0A0MS15 119 aa13.55□□□□□ -0.24
SCARB1-208ENST00000544327 IGKV3D-20A0A0C4DH25 116 aa13.55□□□□□ -0.24
SCARB1-208ENST00000544327 MUC21A0A0G2JKD1 596 aa13.55□□□□□ -0.24
SCARB1-208ENST00000544327 MUC21A0A140T8X8 626 aa13.55□□□□□ -0.24
SCARB1-208ENST00000544327 ZNF25P17030 456 aaPredicted RBP13.55□□□□□ -0.24
SCARB1-208ENST00000544327 FAM106AQ4KMX7 169 aa13.55□□□□□ -0.24
SCARB1-208ENST00000544327 MUC21Q5SSG8 566 aa13.55□□□□□ -0.24
SCARB1-208ENST00000544327 STPG4Q8N801 248 aa13.55□□□□□ -0.24
SCARB1-208ENST00000544327 LINC00527Q9UJ94 153 aa13.55□□□□□ -0.24
SCARB1-208ENST00000544327 hDV102S1A0JD36 115 aa13.55□□□□□ -0.24
SCARB1-208ENST00000544327 NPYP01303 97 aa13.55□□□□□ -0.24
SCARB1-208ENST00000544327 LOXL1Q08397 574 aaPredicted RBP13.55□□□□□ -0.24
SCARB1-208ENST00000544327 SPOCK3Q9BQ16 436 aa13.55□□□□□ -0.24
SCARB1-208ENST00000544327 SCRT2Q9NQ03 307 aa13.55□□□□□ -0.24
SCARB1-208ENST00000544327 LOC389332A0A1B0GUA5 103 aa13.54□□□□□ -0.24
SCARB1-208ENST00000544327 H3BUX3 64 aa13.54□□□□□ -0.24
SCARB1-208ENST00000544327 DLEU1O43261 78 aa13.54□□□□□ -0.24
SCARB1-208ENST00000544327 TMEM208Q9BTX3 173 aa13.54□□□□□ -0.24
SCARB1-208ENST00000544327 ZNF580Q9UK33 172 aa13.54□□□□□ -0.24
SCARB1-208ENST00000544327 ITPR1Q14643 2758 aa13.53□□□□□ -0.24
SCARB1-208ENST00000544327 HBDP02042 147 aa13.53□□□□□ -0.24
SCARB1-208ENST00000544327 G0S2P27469 103 aa13.53□□□□□ -0.24
SCARB1-208ENST00000544327 C16orf92Q96LL3 132 aa13.53□□□□□ -0.24
SCARB1-208ENST00000544327 MSRB1Q9NZV6 116 aa13.53□□□□□ -0.24
SCARB1-208ENST00000544327 C11orf21Q9P2W6 132 aa13.53□□□□□ -0.24
SCARB1-208ENST00000544327 TCF21O43680 179 aa13.53□□□□□ -0.24
SCARB1-208ENST00000544327 DSCR9P59020 149 aa13.53□□□□□ -0.24
SCARB1-208ENST00000544327 DPF1Q92782 380 aa13.53□□□□□ -0.24
SCARB1-208ENST00000544327 IGHV4-4A0A075B6R2 117 aa13.52□□□□□ -0.25
SCARB1-208ENST00000544327 SMKR1H3BMG3 65 aa13.52□□□□□ -0.25
SCARB1-208ENST00000544327 SOCS3O14543 225 aa13.52□□□□□ -0.25
SCARB1-208ENST00000544327 SMAD7O15105 426 aaKnown RBP13.52□□□□□ -0.25
SCARB1-208ENST00000544327 TRBV12-3P01733 135 aa13.52□□□□□ -0.25
SCARB1-208ENST00000544327 LY6EQ16553 131 aa13.52□□□□□ -0.25
SCARB1-208ENST00000544327 LGALS9BQ3B8N2 356 aa13.52□□□□□ -0.25
SCARB1-208ENST00000544327 LGALS9CQ6DKI2 356 aa13.52□□□□□ -0.25
SCARB1-208ENST00000544327 SLC25A34Q6PIV7 304 aa13.52□□□□□ -0.25
SCARB1-208ENST00000544327 UNQ9165/PRO28630Q6UXU0 137 aa13.52□□□□□ -0.25
SCARB1-208ENST00000544327 MAP1LC3AQ9H492 121 aa13.52□□□□□ -0.25
SCARB1-208ENST00000544327 NCR2O95944 276 aa13.51□□□□□ -0.25
SCARB1-208ENST00000544327 IGLV1-40P01703 118 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 1047.5 ms