RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 CA6P23280 308 aa4.88□□□□□ -1.63
LMO3-225ENST00000541295 FXYD2P54710 66 aa4.88□□□□□ -1.63
LMO3-225ENST00000541295 IL1F10Q8WWZ1 152 aa4.88□□□□□ -1.63
LMO3-225ENST00000541295 METTL26Q96S19 204 aa4.88□□□□□ -1.63
LMO3-225ENST00000541295 PHF3Q92576 2039 aaKnown RBP4.87□□□□□ -1.63
LMO3-225ENST00000541295 CPAMD8Q8IZJ3 1885 aa4.87□□□□□ -1.63
LMO3-225ENST00000541295 TRGV5A0A0B4J1U4 118 aa4.87□□□□□ -1.63
LMO3-225ENST00000541295 UBE2L6O14933 153 aa4.87□□□□□ -1.63
LMO3-225ENST00000541295 ZNF823P16415 610 aa4.87□□□□□ -1.63
LMO3-225ENST00000541295 SPINK14Q6IE38 97 aa4.87□□□□□ -1.63
LMO3-225ENST00000541295 PCP2Q8IVA1 136 aa4.87□□□□□ -1.63
LMO3-225ENST00000541295 ZNF407Q9C0G0 2248 aa4.87□□□□□ -1.63
LMO3-225ENST00000541295 A0A0A0MQY5 61 aa4.87□□□□□ -1.63
LMO3-225ENST00000541295 J3QT63 122 aa4.87□□□□□ -1.63
LMO3-225ENST00000541295 K7EM74 188 aa4.87□□□□□ -1.63
LMO3-225ENST00000541295 ZNF726P1Q15940 193 aa4.87□□□□□ -1.63
LMO3-225ENST00000541295 CACNA1GO43497 2377 aa4.87□□□□□ -1.63
LMO3-225ENST00000541295 IGKV1D-43A0A0B4J1Z2 117 aa4.87□□□□□ -1.63
LMO3-225ENST00000541295 TIMM23O14925 209 aa4.87□□□□□ -1.63
LMO3-225ENST00000541295 GHRHP01286 108 aa4.87□□□□□ -1.63
LMO3-225ENST00000541295 COX5AP20674 150 aa4.87□□□□□ -1.63
LMO3-225ENST00000541295 NANOS3P60323 173 aaKnown RBP4.87□□□□□ -1.63
LMO3-225ENST00000541295 MRPS36P82909 103 aaKnown RBP4.87□□□□□ -1.63
LMO3-225ENST00000541295 C9orf139Q6ZV77 190 aa4.87□□□□□ -1.63
LMO3-225ENST00000541295 HDHD3Q9BSH5 251 aaPredicted RBP4.87□□□□□ -1.63
LMO3-225ENST00000541295 CHAC1Q9BUX1 264 aa4.87□□□□□ -1.63
LMO3-225ENST00000541295 MOB4Q9Y3A3 225 aa4.87□□□□□ -1.63
LMO3-225ENST00000541295 IZUMO1RA6ND01 250 aa4.86□□□□□ -1.63
LMO3-225ENST00000541295 SRRM4A7MD48 611 aaKnown RBP4.86□□□□□ -1.63
LMO3-225ENST00000541295 HOXA3O43365 443 aaPredicted RBP4.86□□□□□ -1.63
LMO3-225ENST00000541295 NDUFB3O43676 98 aa4.86□□□□□ -1.63
LMO3-225ENST00000541295 SS18L1O75177 396 aaPredicted RBP4.86□□□□□ -1.63
LMO3-225ENST00000541295 RFPL3SP0C7P2 107 aa4.86□□□□□ -1.63
LMO3-225ENST00000541295 SYNJ2BPP57105 145 aa4.86□□□□□ -1.63
LMO3-225ENST00000541295 C20orf204Q6ZNR8 217 aa4.86□□□□□ -1.63
LMO3-225ENST00000541295 NEXN-AS1Q8NBZ9 246 aa4.86□□□□□ -1.63
LMO3-225ENST00000541295 OR8A1Q8NGG7 326 aa4.86□□□□□ -1.63
LMO3-225ENST00000541295 UBE2L5PA0A1B0GUS4 154 aa4.86□□□□□ -1.63
LMO3-225ENST00000541295 ACYP1P07311 99 aa4.86□□□□□ -1.63
LMO3-225ENST00000541295 FCER1GP30273 86 aa4.86□□□□□ -1.63
LMO3-225ENST00000541295 SMCPP49901 116 aaPredicted RBP4.86□□□□□ -1.63
LMO3-225ENST00000541295 SERP2Q8N6R1 65 aa4.86□□□□□ -1.63
LMO3-225ENST00000541295 PHLDA1Q8WV24 401 aaPredicted RBP4.86□□□□□ -1.63
LMO3-225ENST00000541295 TMEM243Q9BU79 118 aa4.86□□□□□ -1.63
LMO3-225ENST00000541295 PROK2Q9HC23 129 aa4.86□□□□□ -1.63
LMO3-225ENST00000541295 IL36RNQ9UBH0 155 aa4.86□□□□□ -1.63
LMO3-225ENST00000541295 IGHV1-58A0A0C4DH39 117 aa4.85□□□□□ -1.63
LMO3-225ENST00000541295 TRBV7-6A0A0J9YX20 115 aa4.85□□□□□ -1.63
LMO3-225ENST00000541295 TCRBV4S1A1TA0A5B7 111 aa4.85□□□□□ -1.63
LMO3-225ENST00000541295 PINLYPA6NC86 204 aa4.85□□□□□ -1.63
LMO3-225ENST00000541295 SERF2P84101 59 aa4.85□□□□□ -1.63
LMO3-225ENST00000541295 ABCA11PQ4W5N1 156 aa4.85□□□□□ -1.63
LMO3-225ENST00000541295 WDR86Q86TI4 376 aa4.85□□□□□ -1.63
LMO3-225ENST00000541295 ODF3Q96PU9 254 aa4.85□□□□□ -1.63
LMO3-225ENST00000541295 TMEM14AQ9Y6G1 99 aa4.85□□□□□ -1.63
LMO3-225ENST00000541295 IGLV1-36A0A0B4J1U3 117 aa4.85□□□□□ -1.63
LMO3-225ENST00000541295 OVOL3O00110 214 aa4.85□□□□□ -1.63
LMO3-225ENST00000541295 SLC25A20O43772 301 aa4.85□□□□□ -1.63
LMO3-225ENST00000541295 NDUFS7O75251 213 aa4.85□□□□□ -1.63
LMO3-225ENST00000541295 TCF15Q12870 199 aa4.85□□□□□ -1.63
LMO3-225ENST00000541295 PRSS33Q8NF86 280 aa4.85□□□□□ -1.63
LMO3-225ENST00000541295 KMT2EQ8IZD2 1858 aa4.85□□□□□ -1.63
LMO3-225ENST00000541295 C8orf87E5RJ46 101 aa4.85□□□□□ -1.63
LMO3-225ENST00000541295 INS-IGF2F8WCM5 200 aa4.85□□□□□ -1.63
LMO3-225ENST00000541295 RPS11P62280 158 aaKnown RBP eCLIP4.85□□□□□ -1.63
LMO3-225ENST00000541295 TMEM170BQ5T4T1 132 aa4.85□□□□□ -1.63
LMO3-225ENST00000541295 OR5C1Q8NGR4 320 aa4.85□□□□□ -1.63
LMO3-225ENST00000541295 TXNDC17Q9BRA2 123 aa4.85□□□□□ -1.63
LMO3-225ENST00000541295 HCFC1P51610 2035 aa4.85□□□□□ -1.63
LMO3-225ENST00000541295 IGLV3-32A0A0A0MS00 114 aa4.84□□□□□ -1.63
LMO3-225ENST00000541295 NDUFS5O43920 106 aa4.84□□□□□ -1.63
LMO3-225ENST00000541295 TIMM17BO60830 172 aa4.84□□□□□ -1.63
LMO3-225ENST00000541295 RSPO1Q2MKA7 263 aaPredicted RBP4.84□□□□□ -1.63
LMO3-225ENST00000541295 WDR38Q5JTN6 314 aa4.84□□□□□ -1.63
LMO3-225ENST00000541295 SP5Q6BEB4 398 aaPredicted RBP4.84□□□□□ -1.63
LMO3-225ENST00000541295 NUP37Q8NFH4 326 aa4.84□□□□□ -1.63
LMO3-225ENST00000541295 FAM3DQ96BQ1 224 aa4.84□□□□□ -1.63
LMO3-225ENST00000541295 SRXN1Q9BYN0 137 aa4.84□□□□□ -1.63
LMO3-225ENST00000541295 RP1L1Q8IWN7 2480 aaPredicted RBP4.84□□□□□ -1.63
LMO3-225ENST00000541295 DOCK7Q96N67 2140 aa4.84□□□□□ -1.63
LMO3-225ENST00000541295 POLEQ07864 2286 aa4.84□□□□□ -1.63
LMO3-225ENST00000541295 UPK2O00526 184 aa4.84□□□□□ -1.63
LMO3-225ENST00000541295 NPYP01303 97 aa4.84□□□□□ -1.63
LMO3-225ENST00000541295 IGHV3-9P01782 118 aa4.84□□□□□ -1.63
LMO3-225ENST00000541295 QRFPP83859 136 aa4.84□□□□□ -1.63
LMO3-225ENST00000541295 LAGE3Q14657 143 aa4.84□□□□□ -1.63
LMO3-225ENST00000541295 KTN1-AS1Q86SY8 53 aa4.84□□□□□ -1.63
LMO3-225ENST00000541295 TMEM252Q8N6L7 170 aa4.84□□□□□ -1.63
LMO3-225ENST00000541295 POM121L12Q8N7R1 296 aa4.84□□□□□ -1.63
LMO3-225ENST00000541295 COL27A1Q8IZC6 1860 aaPredicted RBP4.84□□□□□ -1.63
LMO3-225ENST00000541295 PCSK5Q92824 1860 aa4.84□□□□□ -1.63
LMO3-225ENST00000541295 DMXL1Q9Y485 3027 aa4.84□□□□□ -1.64
LMO3-225ENST00000541295 ACACAQ13085 2346 aa4.84□□□□□ -1.64
LMO3-225ENST00000541295 ERCC8Q13216 396 aa4.84□□□□□ -1.64
LMO3-225ENST00000541295 FAM222AQ5U5X8 452 aa4.84□□□□□ -1.64
LMO3-225ENST00000541295 COX8CQ7Z4L0 72 aa4.84□□□□□ -1.64
LMO3-225ENST00000541295 SBSPONQ8IVN8 264 aa4.84□□□□□ -1.64
LMO3-225ENST00000541295 HIST1H4GQ99525 98 aa4.84□□□□□ -1.64
LMO3-225ENST00000541295 C11orf94C9JXX5 98 aa4.83□□□□□ -1.64
LMO3-225ENST00000541295 H3BMM0 161 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms