RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 A0A1B0GVT2 93 aa6.11□□□□□ -1.43
USP48-203ENST00000374732 SNURFLB1AK76 121 aa6.11□□□□□ -1.43
USP48-203ENST00000374732 NDUFC2-KCTD14E9PQ53 114 aa6.11□□□□□ -1.43
USP48-203ENST00000374732 H3BVH4 76 aa6.11□□□□□ -1.43
USP48-203ENST00000374732 RBM3P98179 157 aaKnown RBP6.11□□□□□ -1.43
USP48-203ENST00000374732 TMEM155Q4W5P6 130 aa6.11□□□□□ -1.43
USP48-203ENST00000374732 A8MUN3 132 aa6.1□□□□□ -1.43
USP48-203ENST00000374732 UPK2O00526 184 aa6.1□□□□□ -1.43
USP48-203ENST00000374732 SCGB1D4Q6XE38 83 aa6.1□□□□□ -1.43
USP48-203ENST00000374732 C6orf201Q7Z4U5 140 aa6.1□□□□□ -1.43
USP48-203ENST00000374732 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.1□□□□□ -1.43
USP48-203ENST00000374732 C2orf50Q96LR7 162 aa6.1□□□□□ -1.43
USP48-203ENST00000374732 IGHV1-58A0A0C4DH39 117 aa6.1□□□□□ -1.43
USP48-203ENST00000374732 TMEM256-PLSCR3K7ERE1 68 aa6.1□□□□□ -1.43
USP48-203ENST00000374732 ZNF73O43830 326 aaPredicted RBP6.1□□□□□ -1.43
USP48-203ENST00000374732 PRNTQ86SH4 94 aa6.1□□□□□ -1.43
USP48-203ENST00000374732 C4orf45Q96LM5 186 aa6.1□□□□□ -1.43
USP48-203ENST00000374732 Q9H3A6 140 aa6.1□□□□□ -1.43
USP48-203ENST00000374732 LINC00474Q9P2X8 69 aa6.1□□□□□ -1.43
USP48-203ENST00000374732 ADAMTS9Q9P2N4 1935 aa6.1□□□□□ -1.43
USP48-203ENST00000374732 XIRP2A4UGR9 3374 aa6.1□□□□□ -1.43
USP48-203ENST00000374732 TRGV5A0A0B4J1U4 118 aa6.09□□□□□ -1.43
USP48-203ENST00000374732 IGKV1D-13A0A0B4J2D9 117 aa6.09□□□□□ -1.43
USP48-203ENST00000374732 CEBPZOSA8MTT3 80 aa6.09□□□□□ -1.43
USP48-203ENST00000374732 M0R381 172 aa6.09□□□□□ -1.43
USP48-203ENST00000374732 IGKV1-13P0DP09 117 aa6.09□□□□□ -1.43
USP48-203ENST00000374732 MSMPQ1L6U9 139 aa6.09□□□□□ -1.43
USP48-203ENST00000374732 RITA1Q96K30 269 aa6.09□□□□□ -1.43
USP48-203ENST00000374732 TTTY10Q9BZA0 68 aa6.09□□□□□ -1.43
USP48-203ENST00000374732 PLA2G2DQ9UNK4 145 aa6.09□□□□□ -1.43
USP48-203ENST00000374732 PSMB2P49721 201 aa6.09□□□□□ -1.43
USP48-203ENST00000374732 SSBP1Q04837 148 aaKnown RBP6.09□□□□□ -1.43
USP48-203ENST00000374732 FER1L5A0AVI2 2057 aa6.09□□□□□ -1.43
USP48-203ENST00000374732 LY6G6EA0A0G2JKS1 128 aa6.09□□□□□ -1.44
USP48-203ENST00000374732 CST7O76096 145 aa6.09□□□□□ -1.44
USP48-203ENST00000374732 LGALS3P17931 250 aaKnown RBP6.09□□□□□ -1.44
USP48-203ENST00000374732 CFHR3Q02985 330 aa6.09□□□□□ -1.44
USP48-203ENST00000374732 U3KQA8 63 aa6.09□□□□□ -1.44
USP48-203ENST00000374732 BRWD1Q9NSI6 2320 aa6.09□□□□□ -1.44
USP48-203ENST00000374732 RANBP2P49792 3224 aaKnown RBP6.09□□□□□ -1.44
USP48-203ENST00000374732 ARID1AO14497 2285 aa6.08□□□□□ -1.44
USP48-203ENST00000374732 MPDZO75970 2070 aa6.08□□□□□ -1.44
USP48-203ENST00000374732 ATOX1O00244 68 aa6.08□□□□□ -1.44
USP48-203ENST00000374732 SPTBP11277 2137 aa6.08□□□□□ -1.44
USP48-203ENST00000374732 ZNF823P16415 610 aa6.08□□□□□ -1.44
USP48-203ENST00000374732 CXCL5P42830 114 aa6.08□□□□□ -1.44
USP48-203ENST00000374732 UBE2L3P68036 154 aaKnown RBP6.08□□□□□ -1.44
USP48-203ENST00000374732 ZNF584Q8IVC4 421 aa6.08□□□□□ -1.44
USP48-203ENST00000374732 MKXQ8IYA7 352 aa6.08□□□□□ -1.44
USP48-203ENST00000374732 IGHV5-10-1A0A0J9YXX1 117 aa6.08□□□□□ -1.44
USP48-203ENST00000374732 NDUFS5O43920 106 aa6.08□□□□□ -1.44
USP48-203ENST00000374732 IGHG2P01859 326 aa6.08□□□□□ -1.44
USP48-203ENST00000374732 HBBP68871 147 aa6.08□□□□□ -1.44
USP48-203ENST00000374732 QRFPP83859 136 aa6.08□□□□□ -1.44
USP48-203ENST00000374732 LOC101059948A0A1B0GTJ6 334 aa6.07□□□□□ -1.44
USP48-203ENST00000374732 C16orf97H3BN30 126 aa6.07□□□□□ -1.44
USP48-203ENST00000374732 SP5Q6BEB4 398 aaPredicted RBP6.07□□□□□ -1.44
USP48-203ENST00000374732 IGFL3Q6UXB1 125 aa6.07□□□□□ -1.44
USP48-203ENST00000374732 SBSPONQ8IVN8 264 aa6.07□□□□□ -1.44
USP48-203ENST00000374732 TMEM230Q96A57 120 aa6.07□□□□□ -1.44
USP48-203ENST00000374732 CHAC1Q9BUX1 264 aa6.07□□□□□ -1.44
USP48-203ENST00000374732 SPTBN5Q9NRC6 3674 aaKnown RBP6.07□□□□□ -1.44
USP48-203ENST00000374732 CACNA1AO00555 2505 aa6.07□□□□□ -1.44
USP48-203ENST00000374732 MGST1P10620 155 aaKnown RBP6.07□□□□□ -1.44
USP48-203ENST00000374732 PCBD1P61457 104 aa6.07□□□□□ -1.44
USP48-203ENST00000374732 UPK3BQ9BT76 320 aa6.07□□□□□ -1.44
USP48-203ENST00000374732 R4GMQ9 66 aa6.07□□□□□ -1.44
USP48-203ENST00000374732 BDP1A6H8Y1 2624 aa6.07□□□□□ -1.44
USP48-203ENST00000374732 A0A0A6YYD4 124 aa6.07□□□□□ -1.44
USP48-203ENST00000374732 LST1O00453 97 aa6.07□□□□□ -1.44
USP48-203ENST00000374732 LINC00205P59089 165 aa6.07□□□□□ -1.44
USP48-203ENST00000374732 GUSBP11Q6P575 273 aa6.07□□□□□ -1.44
USP48-203ENST00000374732 TREML4Q6UXN2 200 aa6.07□□□□□ -1.44
USP48-203ENST00000374732 CLEC19AQ6UXS0 136 aa6.07□□□□□ -1.44
USP48-203ENST00000374732 SPAG17Q6Q759 2223 aa6.06□□□□□ -1.44
USP48-203ENST00000374732 SZT2Q5T011 3432 aa6.06□□□□□ -1.44
USP48-203ENST00000374732 SSSCA1O60232 199 aa6.06□□□□□ -1.44
USP48-203ENST00000374732 RNASE2P10153 161 aaKnown RBP6.06□□□□□ -1.44
USP48-203ENST00000374732 CA6P23280 308 aa6.06□□□□□ -1.44
USP48-203ENST00000374732 ZNF80P51504 273 aaPredicted RBP6.06□□□□□ -1.44
USP48-203ENST00000374732 TRAV8-3A0A0A6YYJ7 113 aa6.06□□□□□ -1.44
USP48-203ENST00000374732 IGHV3-20A0A0C4DH32 117 aa6.06□□□□□ -1.44
USP48-203ENST00000374732 K7EMI3 77 aa6.06□□□□□ -1.44
USP48-203ENST00000374732 MED14OSP0DP75 135 aa6.06□□□□□ -1.44
USP48-203ENST00000374732 COL8A2P25067 703 aa6.06□□□□□ -1.44
USP48-203ENST00000374732 LYZL4Q96KX0 146 aa6.06□□□□□ -1.44
USP48-203ENST00000374732 SRXN1Q9BYN0 137 aa6.06□□□□□ -1.44
USP48-203ENST00000374732 DEFB127Q9H1M4 99 aa6.06□□□□□ -1.44
USP48-203ENST00000374732 TRBV20OR9-2A0A075B6H5 130 aa6.05□□□□□ -1.44
USP48-203ENST00000374732 C17orf51A8MQB3 221 aa6.05□□□□□ -1.44
USP48-203ENST00000374732 C1orf100Q5SVJ3 147 aa6.05□□□□□ -1.44
USP48-203ENST00000374732 RFESDQ8TAC1 157 aa6.05□□□□□ -1.44
USP48-203ENST00000374732 TMEM243Q9BU79 118 aa6.05□□□□□ -1.44
USP48-203ENST00000374732 UNC80Q8N2C7 3258 aa6.05□□□□□ -1.44
USP48-203ENST00000374732 CCL8P80075 99 aa6.05□□□□□ -1.44
USP48-203ENST00000374732 H1FXQ92522 213 aaKnown RBP6.05□□□□□ -1.44
USP48-203ENST00000374732 FAM3DQ96BQ1 224 aa6.05□□□□□ -1.44
USP48-203ENST00000374732 MGST2Q99735 147 aa6.05□□□□□ -1.44
USP48-203ENST00000374732 DOCK11Q5JSL3 2073 aa6.05□□□□□ -1.44
USP48-203ENST00000374732 EML6Q6ZMW3 1958 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms