RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 IGHV3-33P01772 117 aa0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 CCL4P13236 92 aa0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 FABP4P15090 132 aa0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 TCTAP57738 103 aa0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 TAS2R41P59536 307 aa0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 CASC2Q6XLA1 102 aa0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 TMED4Q7Z7H5 227 aa0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 STX19Q8N4C7 294 aa0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 FAM24BQ8N5W8 94 aa0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 OR4B1Q8NGF8 309 aa0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 OR5AK2Q8NH90 309 aa0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 DYDC1Q8WWB3 177 aa0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 BORCS8Q96FH0 119 aa0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 AP1S3Q96PC3 154 aa0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 MCEEQ96PE7 176 aa0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 OR4C12Q96R67 309 aa0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 FAM103A1Q9BTL3 118 aaKnown RBP0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 EFCAB11Q9BUY7 163 aa0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 MED11Q9P086 117 aa0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 NAT8BQ9UHF3 227 aa0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 RYR1P21817 5038 aa0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 ANK2Q01484 3957 aa0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 TTC28Q96AY4 2481 aa0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 ABCA1O95477 2261 aa0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 COL6A3P12111 3177 aa0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 YTHDC2Q9H6S0 1430 aaKnown RBP0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 TRAPPC8Q9Y2L5 1435 aa0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 TANC1Q9C0D5 1861 aa0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 KIDINS220Q9ULH0 1771 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 LRP1Q07954 4544 aaKnown RBP0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 MYH13Q9UKX3 1938 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 TCOF1Q13428 1488 aaKnown RBP0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 SSPOA2VEC9 5147 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 BDP1A6H8Y1 2624 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 A0A0J9YY99 117 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 C3orf85A0A1B0GTC6 90 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 PRORSD1PA6NEY8 169 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 SULT1C4O75897 302 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 PIAS1O75925 651 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 TRACP01848 142 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 FABP2P12104 132 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 PDE6GP18545 87 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 RPS3P23396 243 aaKnown RBP eCLIP0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 GLRXP35754 106 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 MRPS36P82909 103 aaKnown RBP0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 LTC4SQ16873 150 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 PHF5AQ7RTV0 110 aaKnown RBP0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 LYG2Q86SG7 212 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 ANGPTL5Q86XS5 388 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 PRR15Q8IV56 129 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 LINC00269Q8N2A0 174 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 C10orf111Q8N326 155 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 C5orf17Q8NAS9 161 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 PLAC4Q8WY50 150 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 AP3S1Q92572 193 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 PLEKHB2Q96CS7 222 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 RMND5BQ96G75 393 aaPredicted RBP0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 HOPXQ9BPY8 73 aaPredicted RBP0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 LPAR5Q9H1C0 372 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 BIN3Q9NQY0 253 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 OTORQ9NRC9 128 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 LAMTOR3Q9UHA4 124 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 BPTFQ12830 3046 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 DLC1Q96QB1 1528 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 PBRM1Q86U86 1689 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 MUC2Q02817 5179 aa0.11□□□□□ -2.39
RNU4-48P-201ENST00000365559 PARP14Q460N5 1801 aa0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 KIF13AQ9H1H9 1805 aa0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 TNS1Q9HBL0 1735 aaKnown RBP0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 MED13LQ71F56 2210 aa0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 PLXNA1Q9UIW2 1896 aa0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 TRDV1A0A1B0GX56 115 aa0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 GABARAPH6UMI1 98 aa0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 LY6G6CO95867 125 aa0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 KRTAP2-3P0C7H8 128 aa0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 SERPINB1P30740 379 aa0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 CAV3P56539 151 aa0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 NDUFA6P56556 154 aa0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 SNRPD3P62318 126 aaKnown RBP0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 C3orf33Q6P1S2 294 aa0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 OR5H6Q8NGV6 325 aa0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 CCL4L1Q8NHW4 92 aa0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 CDC26Q8NHZ8 85 aa0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 GRPEL2Q8TAA5 225 aa0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 CLEC2BQ92478 149 aa0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 KRTAP2-4Q9BYR9 128 aa0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 KRTAP2-1Q9BYU5 128 aa0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 TAF9BQ9HBM6 251 aa0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 GID8Q9NWU2 228 aa0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 UFC1Q9Y3C8 167 aa0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 SYNE1Q8NF91 8797 aaKnown RBP0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 UNC79Q9P2D8 2635 aa0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 KDM5CP41229 1560 aa0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 DSPPQ9NZW4 1301 aa0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 OTOGQ6ZRI0 2925 aa0.1□□□□□ -2.39
RNU4-48P-201ENST00000365559 ROCK1Q13464 1354 aa0.09□□□□□ -2.39
RNU4-48P-201ENST00000365559 SPAG17Q6Q759 2223 aa0.09□□□□□ -2.39
RNU4-48P-201ENST00000365559 LOC107984156A0A0G2JMH3 177 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 LOC107986453A0A1B0GWG9 222 aa0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms