RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 IGLV11-55A0A075B6I3 123 aa15.45■□□□□ 0.06
CRLF3-201ENST00000324238 TMEM97Q5BJF2 176 aa15.45■□□□□ 0.06
CRLF3-201ENST00000324238 MS4A6AQ9H2W1 248 aa15.45■□□□□ 0.06
CRLF3-201ENST00000324238 CST9LQ9H4G1 147 aa15.45■□□□□ 0.06
CRLF3-201ENST00000324238 UTP20O75691 2785 aaKnown RBP15.45■□□□□ 0.06
CRLF3-201ENST00000324238 PAX2Q02962 417 aa15.45■□□□□ 0.06
CRLF3-201ENST00000324238 SPRY2O43597 315 aa15.45■□□□□ 0.06
CRLF3-201ENST00000324238 IGHG4P01861 327 aa15.45■□□□□ 0.06
CRLF3-201ENST00000324238 VPS25Q9BRG1 176 aa15.45■□□□□ 0.06
CRLF3-201ENST00000324238 FGF6P10767 208 aa15.44■□□□□ 0.06
CRLF3-201ENST00000324238 ECSCRQ19T08 205 aa15.44■□□□□ 0.06
CRLF3-201ENST00000324238 FER1L6-AS1Q8NA97 138 aa15.44■□□□□ 0.06
CRLF3-201ENST00000324238 CTSGP08311 255 aa15.44■□□□□ 0.06
CRLF3-201ENST00000324238 ADORA2A-AS1P86434 159 aa15.44■□□□□ 0.06
CRLF3-201ENST00000324238 ZNF575Q86XF7 245 aa15.44■□□□□ 0.06
CRLF3-201ENST00000324238 CSMD2Q7Z408 3487 aa15.43■□□□□ 0.06
CRLF3-201ENST00000324238 RAB1BQ9H0U4 201 aa15.43■□□□□ 0.06
CRLF3-201ENST00000324238 LYPD1Q8N2G4 141 aa15.43■□□□□ 0.06
CRLF3-201ENST00000324238 H3BUT2 72 aa15.42■□□□□ 0.06
CRLF3-201ENST00000324238 CD5LO43866 347 aa15.42■□□□□ 0.06
CRLF3-201ENST00000324238 IFI27L1Q96BM0 104 aa15.42■□□□□ 0.06
CRLF3-201ENST00000324238 IGHV3OR16-10A0A075B7F0 116 aa15.42■□□□□ 0.06
CRLF3-201ENST00000324238 A0A1W2PPR1 153 aa15.42■□□□□ 0.06
CRLF3-201ENST00000324238 GAGE12BA1L429 117 aa15.42■□□□□ 0.06
CRLF3-201ENST00000324238 J3KRW8 73 aa15.42■□□□□ 0.06
CRLF3-201ENST00000324238 ZFP36P26651 326 aaKnown RBP15.42■□□□□ 0.06
CRLF3-201ENST00000324238 TIMD4Q96H15 378 aa15.42■□□□□ 0.06
CRLF3-201ENST00000324238 TRBV6-1A0A0K0K1D8 114 aa15.42■□□□□ 0.06
CRLF3-201ENST00000324238 SAP30O75446 220 aa15.42■□□□□ 0.06
CRLF3-201ENST00000324238 ZNF493Q6ZR52 646 aa15.42■□□□□ 0.06
CRLF3-201ENST00000324238 JMJD8Q96S16 334 aa15.42■□□□□ 0.06
CRLF3-201ENST00000324238 LINC01548A6NM66 108 aa15.41■□□□□ 0.06
CRLF3-201ENST00000324238 LY6DQ14210 128 aa15.41■□□□□ 0.06
CRLF3-201ENST00000324238 HBDP02042 147 aa15.41■□□□□ 0.06
CRLF3-201ENST00000324238 OCIAD2Q56VL3 154 aa15.41■□□□□ 0.06
CRLF3-201ENST00000324238 VMO1Q7Z5L0 202 aa15.41■□□□□ 0.06
CRLF3-201ENST00000324238 CSPG4Q6UVK1 2322 aa15.4■□□□□ 0.06
CRLF3-201ENST00000324238 IL17RELQ6ZVW7 336 aa15.4■□□□□ 0.06
CRLF3-201ENST00000324238 LY6G5BQ8NDX9 201 aa15.4■□□□□ 0.06
CRLF3-201ENST00000324238 NDUFA3O95167 84 aa15.4■□□□□ 0.06
CRLF3-201ENST00000324238 ZNF562Q6V9R5 426 aa15.4■□□□□ 0.06
CRLF3-201ENST00000324238 RNF5Q99942 180 aa15.4■□□□□ 0.06
CRLF3-201ENST00000324238 CUBNO60494 3623 aa15.4■□□□□ 0.06
CRLF3-201ENST00000324238 TRAV26-2A0A0B4J265 109 aa15.39■□□□□ 0.05
CRLF3-201ENST00000324238 NPBQ8NG41 125 aa15.39■□□□□ 0.05
CRLF3-201ENST00000324238 FLNCQ14315 2725 aa15.39■□□□□ 0.05
CRLF3-201ENST00000324238 G3V318 75 aa15.39■□□□□ 0.05
CRLF3-201ENST00000324238 CLEC3BP05452 202 aa15.39■□□□□ 0.05
CRLF3-201ENST00000324238 RPL7P18124 248 aaKnown RBP15.39■□□□□ 0.05
CRLF3-201ENST00000324238 CDKN1BP46527 198 aa15.39■□□□□ 0.05
CRLF3-201ENST00000324238 OR11H6Q8NGC7 330 aa15.39■□□□□ 0.05
CRLF3-201ENST00000324238 LINC00527Q9UJ94 153 aa15.39■□□□□ 0.05
CRLF3-201ENST00000324238 IGKV2D-26A0A0A0MRZ7 120 aa15.39■□□□□ 0.05
CRLF3-201ENST00000324238 CEACAM3P40198 252 aa15.39■□□□□ 0.05
CRLF3-201ENST00000324238 LEPP41159 167 aa15.39■□□□□ 0.05
CRLF3-201ENST00000324238 Q6AWC8 147 aa15.39■□□□□ 0.05
CRLF3-201ENST00000324238 C15orf32Q32M92 178 aa15.38■□□□□ 0.05
CRLF3-201ENST00000324238 GAGE10A6NGK3 116 aa15.38■□□□□ 0.05
CRLF3-201ENST00000324238 A0A1B0GW15 77 aa15.37■□□□□ 0.05
CRLF3-201ENST00000324238 UBTD1Q9HAC8 227 aa15.37■□□□□ 0.05
CRLF3-201ENST00000324238 PEF1Q9UBV8 284 aaKnown RBP15.37■□□□□ 0.05
CRLF3-201ENST00000324238 U3KQK5 164 aa15.37■□□□□ 0.05
CRLF3-201ENST00000324238 CACNA1AO00555 2505 aa15.37■□□□□ 0.05
CRLF3-201ENST00000324238 IGHV7-81A0A0B4J1V7 117 aa15.37■□□□□ 0.05
CRLF3-201ENST00000324238 PRSS1P07477 247 aa15.37■□□□□ 0.05
CRLF3-201ENST00000324238 PDE6HQ13956 83 aa15.37■□□□□ 0.05
CRLF3-201ENST00000324238 KIR3DS1Q14943 382 aa15.37■□□□□ 0.05
CRLF3-201ENST00000324238 GATD1Q8NB37 220 aa15.37■□□□□ 0.05
CRLF3-201ENST00000324238 RNF185Q96GF1 192 aa15.37■□□□□ 0.05
CRLF3-201ENST00000324238 A1L4Q6 167 aa15.36■□□□□ 0.05
CRLF3-201ENST00000324238 TRGV3P03979 118 aa15.36■□□□□ 0.05
CRLF3-201ENST00000324238 SAPCD1Q5SSQ6 148 aa15.36■□□□□ 0.05
CRLF3-201ENST00000324238 POLQO75417 2590 aa15.36■□□□□ 0.05
CRLF3-201ENST00000324238 SMAD7O15105 426 aaKnown RBP15.36■□□□□ 0.05
CRLF3-201ENST00000324238 PRTN3P24158 256 aa15.36■□□□□ 0.05
CRLF3-201ENST00000324238 C11orf21Q9P2W6 132 aa15.36■□□□□ 0.05
CRLF3-201ENST00000324238 PAX8Q06710 450 aa15.36■□□□□ 0.05
CRLF3-201ENST00000324238 CLEC19AQ6UXS0 136 aa15.36■□□□□ 0.05
CRLF3-201ENST00000324238 AP1S3Q96PC3 154 aa15.36■□□□□ 0.05
CRLF3-201ENST00000324238 DEFB1P60022 68 aa15.35■□□□□ 0.05
CRLF3-201ENST00000324238 SRSF8Q9BRL6 282 aaKnown RBP15.35■□□□□ 0.05
CRLF3-201ENST00000324238 LGALS9BQ3B8N2 356 aa15.35■□□□□ 0.05
CRLF3-201ENST00000324238 LGALS9CQ6DKI2 356 aa15.35■□□□□ 0.05
CRLF3-201ENST00000324238 BOD1L2Q8IYS8 172 aa15.35■□□□□ 0.05
CRLF3-201ENST00000324238 TTC9CQ8N5M4 171 aa15.35■□□□□ 0.05
CRLF3-201ENST00000324238 DEFB104AQ8WTQ1 72 aa15.35■□□□□ 0.05
CRLF3-201ENST00000324238 ODF3BA8MYP8 253 aa15.34■□□□□ 0.05
CRLF3-201ENST00000324238 GTSCR1Q86UQ5 136 aa15.34■□□□□ 0.05
CRLF3-201ENST00000324238 USP9YO00507 2555 aaPredicted RBP15.34■□□□□ 0.05
CRLF3-201ENST00000324238 IGLC6P0CF74 106 aa15.34■□□□□ 0.05
CRLF3-201ENST00000324238 RIPPLY3P57055 190 aa15.34■□□□□ 0.05
CRLF3-201ENST00000324238 UFC1Q9Y3C8 167 aa15.34■□□□□ 0.05
CRLF3-201ENST00000324238 ZFYVE26Q68DK2 2539 aa15.33■□□□□ 0.05
CRLF3-201ENST00000324238 K7ERJ3 54 aa15.33■□□□□ 0.05
CRLF3-201ENST00000324238 TNFRSF6BO95407 300 aa15.33■□□□□ 0.05
CRLF3-201ENST00000324238 CFAP46Q8IYW2 2715 aa15.33■□□□□ 0.04
CRLF3-201ENST00000324238 GCSHP23434 173 aa15.33■□□□□ 0.04
CRLF3-201ENST00000324238 MSRB2Q9Y3D2 182 aa15.33■□□□□ 0.04
CRLF3-201ENST00000324238 BMI1P35226 326 aa15.32■□□□□ 0.04
CRLF3-201ENST00000324238 TMEM219Q86XT9 240 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms