RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 KIR2DL4Q99706 377 aa10.13□□□□□ -0.79
HERC6-202ENST00000273960 UFC1Q9Y3C8 167 aa10.13□□□□□ -0.79
HERC6-202ENST00000273960 IGHV1-18A0A0C4DH31 117 aa10.12□□□□□ -0.79
HERC6-202ENST00000273960 TTC9CQ8N5M4 171 aa10.12□□□□□ -0.79
HERC6-202ENST00000273960 E9PLD3 99 aa10.12□□□□□ -0.79
HERC6-202ENST00000273960 TM4SF5O14894 197 aa10.12□□□□□ -0.79
HERC6-202ENST00000273960 TCF15Q12870 199 aa10.12□□□□□ -0.79
HERC6-202ENST00000273960 GFRALQ6UXV0 394 aa10.12□□□□□ -0.79
HERC6-202ENST00000273960 ZFP2Q6ZN57 461 aa10.12□□□□□ -0.79
HERC6-202ENST00000273960 C1orf122Q6ZSJ8 110 aa10.12□□□□□ -0.79
HERC6-202ENST00000273960 PHLDA1Q8WV24 401 aaPredicted RBP10.12□□□□□ -0.79
HERC6-202ENST00000273960 H7C2G1 150 aa10.12□□□□□ -0.79
HERC6-202ENST00000273960 SPATA25Q9BR10 227 aa10.12□□□□□ -0.79
HERC6-202ENST00000273960 OTORQ9NRC9 128 aa10.12□□□□□ -0.79
HERC6-202ENST00000273960 MAP1AP78559 2803 aaPredicted RBP10.11□□□□□ -0.79
HERC6-202ENST00000273960 SH2D1AO60880 128 aa10.11□□□□□ -0.79
HERC6-202ENST00000273960 ODF1Q14990 250 aa10.11□□□□□ -0.79
HERC6-202ENST00000273960 RASL11BQ9BPW5 248 aa10.11□□□□□ -0.79
HERC6-202ENST00000273960 J3KRW8 73 aa10.11□□□□□ -0.79
HERC6-202ENST00000273960 HLA-DMBP28068 263 aa10.11□□□□□ -0.79
HERC6-202ENST00000273960 NFE4Q86UQ8 179 aa10.11□□□□□ -0.79
HERC6-202ENST00000273960 SIVA1O15304 175 aa10.1□□□□□ -0.79
HERC6-202ENST00000273960 PRTN3P24158 256 aa10.1□□□□□ -0.79
HERC6-202ENST00000273960 TNFAIP6P98066 277 aaPredicted RBP10.1□□□□□ -0.79
HERC6-202ENST00000273960 FHL3Q13643 280 aa10.1□□□□□ -0.79
HERC6-202ENST00000273960 C8orf46Q8TAG6 207 aa10.1□□□□□ -0.79
HERC6-202ENST00000273960 MAP1LC3AQ9H492 121 aa10.1□□□□□ -0.79
HERC6-202ENST00000273960 HHLA3Q9XRX5 114 aa10.1□□□□□ -0.79
HERC6-202ENST00000273960 IL4P05112 153 aa10.1□□□□□ -0.79
HERC6-202ENST00000273960 EMP1P54849 157 aa10.1□□□□□ -0.79
HERC6-202ENST00000273960 OR4C13Q8NGP0 309 aa10.1□□□□□ -0.79
HERC6-202ENST00000273960 LINC01549A6NIU2 74 aa10.1□□□□□ -0.79
HERC6-202ENST00000273960 HLA-DRB4P13762 266 aa10.1□□□□□ -0.79
HERC6-202ENST00000273960 PRSS33Q8NF86 280 aa10.1□□□□□ -0.79
HERC6-202ENST00000273960 CTSZQ9UBR2 303 aa10.1□□□□□ -0.79
HERC6-202ENST00000273960 HLA-DRB4X5D2U9 266 aa10.1□□□□□ -0.79
HERC6-202ENST00000273960 IGHV3OR16-13A0A075B7E8 117 aa10.09□□□□□ -0.79
HERC6-202ENST00000273960 IGHV3-74A0A0B4J1X5 117 aa10.09□□□□□ -0.79
HERC6-202ENST00000273960 DPM2O94777 84 aa10.09□□□□□ -0.79
HERC6-202ENST00000273960 CGB3P0DN86 165 aa10.09□□□□□ -0.79
HERC6-202ENST00000273960 CGB7P0DN87 165 aa10.09□□□□□ -0.79
HERC6-202ENST00000273960 FOXI1Q12951 378 aa10.09□□□□□ -0.79
HERC6-202ENST00000273960 SRSF9Q13242 221 aaKnown RBP eCLIP10.09□□□□□ -0.79
HERC6-202ENST00000273960 PRR30Q53SZ7 412 aaPredicted RBP10.09□□□□□ -0.79
HERC6-202ENST00000273960 SCGB1D4Q6XE38 83 aa10.09□□□□□ -0.79
HERC6-202ENST00000273960 RPEQ96AT9 228 aa10.09□□□□□ -0.79
HERC6-202ENST00000273960 SCNM1Q9BWG6 230 aa10.09□□□□□ -0.79
HERC6-202ENST00000273960 ARHGAP32A7KAX9 2087 aa10.09□□□□□ -0.79
HERC6-202ENST00000273960 RPL27AP46776 148 aaKnown RBP10.09□□□□□ -0.79
HERC6-202ENST00000273960 POU2AF1Q16633 256 aa10.09□□□□□ -0.79
HERC6-202ENST00000273960 SCGB2A1O75556 95 aa10.09□□□□□ -0.79
HERC6-202ENST00000273960 GAFA1Q96PS6 74 aa10.09□□□□□ -0.79
HERC6-202ENST00000273960 FBXL15Q9H469 300 aa10.09□□□□□ -0.79
HERC6-202ENST00000273960 RNF7Q9UBF6 113 aa10.09□□□□□ -0.79
HERC6-202ENST00000273960 EGR2P11161 476 aaPredicted RBP10.08□□□□□ -0.8
HERC6-202ENST00000273960 RRN3P1Q2M238 152 aa10.08□□□□□ -0.8
HERC6-202ENST00000273960 VMA21Q3ZAQ7 101 aa10.08□□□□□ -0.8
HERC6-202ENST00000273960 SHISA2Q6UWI4 295 aa10.08□□□□□ -0.8
HERC6-202ENST00000273960 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.08□□□□□ -0.8
HERC6-202ENST00000273960 CCL17Q92583 94 aa10.08□□□□□ -0.8
HERC6-202ENST00000273960 VKORC1Q9BQB6 163 aa10.08□□□□□ -0.8
HERC6-202ENST00000273960 NGBQ9NPG2 151 aa10.08□□□□□ -0.8
HERC6-202ENST00000273960 OVOL3O00110 214 aa10.08□□□□□ -0.8
HERC6-202ENST00000273960 ASCL5Q7RTU5 278 aa10.08□□□□□ -0.8
HERC6-202ENST00000273960 SMIM20Q8N5G0 67 aa10.08□□□□□ -0.8
HERC6-202ENST00000273960 CDIP1Q9H305 208 aa10.08□□□□□ -0.8
HERC6-202ENST00000273960 RELNP78509 3460 aa10.08□□□□□ -0.8
HERC6-202ENST00000273960 IGKV3-15P01624 115 aa10.08□□□□□ -0.8
HERC6-202ENST00000273960 SCGB1C2P0DMR2 95 aa10.08□□□□□ -0.8
HERC6-202ENST00000273960 ZNF474Q6S9Z5 364 aaPredicted RBP10.08□□□□□ -0.8
HERC6-202ENST00000273960 COL12A1Q99715 3063 aa10.07□□□□□ -0.8
HERC6-202ENST00000273960 Q6ZUT4 128 aa10.07□□□□□ -0.8
HERC6-202ENST00000273960 THAP8Q8NA92 274 aa10.07□□□□□ -0.8
HERC6-202ENST00000273960 ZNF502Q8TBZ5 544 aa10.07□□□□□ -0.8
HERC6-202ENST00000273960 HOXA3O43365 443 aaPredicted RBP10.07□□□□□ -0.8
HERC6-202ENST00000273960 TNFRSF6BO95407 300 aa10.07□□□□□ -0.8
HERC6-202ENST00000273960 ZNF80P51504 273 aaPredicted RBP10.07□□□□□ -0.8
HERC6-202ENST00000273960 IGHV3-66A0A0C4DH42 116 aa10.06□□□□□ -0.8
HERC6-202ENST00000273960 TCTEX1D4Q5JR98 221 aa10.06□□□□□ -0.8
HERC6-202ENST00000273960 DPF1Q92782 380 aa10.06□□□□□ -0.8
HERC6-202ENST00000273960 DKK4Q9UBT3 224 aa10.06□□□□□ -0.8
HERC6-202ENST00000273960 NCBP2LA6PVI3 153 aaKnown RBP10.06□□□□□ -0.8
HERC6-202ENST00000273960 IGHG3P01860 377 aa10.06□□□□□ -0.8
HERC6-202ENST00000273960 COX7A1P24310 79 aa10.06□□□□□ -0.8
HERC6-202ENST00000273960 HERV-K104P63124 156 aa10.06□□□□□ -0.8
HERC6-202ENST00000273960 TMEM167AQ8TBQ9 72 aa10.06□□□□□ -0.8
HERC6-202ENST00000273960 DYNLRB1Q9NP97 96 aa10.06□□□□□ -0.8
HERC6-202ENST00000273960 FAM208BQ5VWN6 2430 aa10.06□□□□□ -0.8
HERC6-202ENST00000273960 TRBV19A0A075B6N1 114 aa10.06□□□□□ -0.8
HERC6-202ENST00000273960 ARL3P36405 182 aa10.06□□□□□ -0.8
HERC6-202ENST00000273960 ERCC8Q13216 396 aa10.06□□□□□ -0.8
HERC6-202ENST00000273960 ZFYVE26Q68DK2 2539 aa10.06□□□□□ -0.8
HERC6-202ENST00000273960 SMCPP49901 116 aaPredicted RBP10.05□□□□□ -0.8
HERC6-202ENST00000273960 MYOZ3Q8TDC0 251 aa10.05□□□□□ -0.8
HERC6-202ENST00000273960 AAMDCQ9H7C9 122 aa10.05□□□□□ -0.8
HERC6-202ENST00000273960 KLHL30-AS1Q8NEE0 82 aa10.05□□□□□ -0.8
HERC6-202ENST00000273960 TRGV9Q99603 122 aa10.05□□□□□ -0.8
HERC6-202ENST00000273960 RAB9BQ9NP90 201 aa10.05□□□□□ -0.8
HERC6-202ENST00000273960 ASH1LQ9NR48 2969 aaKnown RBP10.05□□□□□ -0.8
HERC6-202ENST00000273960 MZT1Q08AG7 82 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms