RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Olfr19Q9JHB2 309 aa12.99□□□□□ -0.33
Trim39-203ENSMUST00000113706 Tagln2Q9WVA4 199 aaKnown RBP12.99□□□□□ -0.33
Trim39-203ENSMUST00000113706 Mgst2A2RST1 147 aa12.98□□□□□ -0.33
Trim39-203ENSMUST00000113706 TgfaP48030 159 aa12.98□□□□□ -0.33
Trim39-203ENSMUST00000113706 AmelxP63277 210 aa12.98□□□□□ -0.33
Trim39-203ENSMUST00000113706 Ceacam12Q3UKP4 300 aa12.98□□□□□ -0.33
Trim39-203ENSMUST00000113706 Psg19Q4KL31 475 aa12.98□□□□□ -0.33
Trim39-203ENSMUST00000113706 Olfr139Q60891 315 aa12.98□□□□□ -0.33
Trim39-203ENSMUST00000113706 Mus81Q91ZJ0 551 aa12.98□□□□□ -0.33
Trim39-203ENSMUST00000113706 Cds2Q99L43 444 aa12.98□□□□□ -0.33
Trim39-203ENSMUST00000113706 Gm10306Q9CUK2 115 aa12.98□□□□□ -0.33
Trim39-203ENSMUST00000113706 Efcab10Q9D581 132 aa12.98□□□□□ -0.33
Trim39-203ENSMUST00000113706 TslpQ9JIE6 140 aa12.98□□□□□ -0.33
Trim39-203ENSMUST00000113706 PpyP10601 100 aa12.98□□□□□ -0.33
Trim39-203ENSMUST00000113706 Ssbp4Q3U4B1 363 aa12.98□□□□□ -0.33
Trim39-203ENSMUST00000113706 Zfp273Q7M6W8 501 aa12.98□□□□□ -0.33
Trim39-203ENSMUST00000113706 Vmn1r225Q8R2A5 298 aa12.98□□□□□ -0.33
Trim39-203ENSMUST00000113706 NagkQ9QZ08 343 aa12.98□□□□□ -0.33
Trim39-203ENSMUST00000113706 Inafm1E9PV59 130 aa12.98□□□□□ -0.33
Trim39-203ENSMUST00000113706 Icam2P35330 277 aa12.98□□□□□ -0.33
Trim39-203ENSMUST00000113706 Q08AU9 97 aa12.98□□□□□ -0.33
Trim39-203ENSMUST00000113706 Q504N7 393 aa12.98□□□□□ -0.33
Trim39-203ENSMUST00000113706 Tgfbr1Q64729 503 aa12.98□□□□□ -0.33
Trim39-203ENSMUST00000113706 Gm5771Q792Y9 245 aa12.98□□□□□ -0.33
Trim39-203ENSMUST00000113706 IdnkQ8R0J8 184 aa12.98□□□□□ -0.33
Trim39-203ENSMUST00000113706 Tmem147Q9CQG6 224 aa12.98□□□□□ -0.33
Trim39-203ENSMUST00000113706 Bpifa5Q9CQX3 270 aa12.98□□□□□ -0.33
Trim39-203ENSMUST00000113706 Gpr34Q9R1K6 375 aa12.98□□□□□ -0.33
Trim39-203ENSMUST00000113706 Csmd1Q923L3 3564 aa12.97□□□□□ -0.33
Trim39-203ENSMUST00000113706 A0A286YDM5 308 aa12.97□□□□□ -0.33
Trim39-203ENSMUST00000113706 Cst7O89098 144 aa12.97□□□□□ -0.33
Trim39-203ENSMUST00000113706 Cd84Q18PI6 329 aa12.97□□□□□ -0.33
Trim39-203ENSMUST00000113706 Mr1Q8HWB0 341 aa12.97□□□□□ -0.33
Trim39-203ENSMUST00000113706 Olfr368Q8VF22 327 aa12.97□□□□□ -0.33
Trim39-203ENSMUST00000113706 Map1lc3bQ9CQV6 125 aa12.97□□□□□ -0.33
Trim39-203ENSMUST00000113706 Prr23a3Q9CWP9 254 aa12.97□□□□□ -0.33
Trim39-203ENSMUST00000113706 Trem3Q9JKE1 183 aa12.97□□□□□ -0.33
Trim39-203ENSMUST00000113706 Trav4-2A0A075B638 110 aa12.97□□□□□ -0.33
Trim39-203ENSMUST00000113706 Vmn1r194J3JS27 296 aa12.97□□□□□ -0.33
Trim39-203ENSMUST00000113706 P01659 112 aa12.97□□□□□ -0.33
Trim39-203ENSMUST00000113706 Meox1P32442 253 aa12.97□□□□□ -0.33
Trim39-203ENSMUST00000113706 Olfr859Q7TRF5 309 aa12.97□□□□□ -0.33
Trim39-203ENSMUST00000113706 Olfr305Q7TS02 319 aa12.97□□□□□ -0.33
Trim39-203ENSMUST00000113706 Ndufs8Q8K3J1 212 aa12.97□□□□□ -0.33
Trim39-203ENSMUST00000113706 Olfr1394Q8VET2 312 aa12.97□□□□□ -0.33
Trim39-203ENSMUST00000113706 Olfr960Q8VET5 316 aa12.97□□□□□ -0.33
Trim39-203ENSMUST00000113706 Gm15127B1AVZ5 449 aa12.96□□□□□ -0.33
Trim39-203ENSMUST00000113706 Gm15091B1AZM2 449 aa12.96□□□□□ -0.33
Trim39-203ENSMUST00000113706 Gm21882J3QN86 361 aa12.96□□□□□ -0.33
Trim39-203ENSMUST00000113706 Rhox4fQ2MDF8 205 aa12.96□□□□□ -0.33
Trim39-203ENSMUST00000113706 Rhox4cQ2MDG1 205 aa12.96□□□□□ -0.33
Trim39-203ENSMUST00000113706 Pip4p1Q3TWL2 284 aa12.96□□□□□ -0.33
Trim39-203ENSMUST00000113706 Olfr113Q8VEU4 312 aa12.96□□□□□ -0.33
Trim39-203ENSMUST00000113706 Olfr344Q8VFP9 309 aa12.96□□□□□ -0.33
Trim39-203ENSMUST00000113706 Ms4a6cQ99N08 217 aa12.96□□□□□ -0.33
Trim39-203ENSMUST00000113706 Rhox4aQ9D3I8 205 aa12.96□□□□□ -0.33
Trim39-203ENSMUST00000113706 Hsd17b11Q9EQ06 298 aa12.96□□□□□ -0.33
Trim39-203ENSMUST00000113706 Mbnl1Q9JKP5 341 aaKnown RBP12.96□□□□□ -0.33
Trim39-203ENSMUST00000113706 Chst4Q9R1I1 388 aa12.96□□□□□ -0.33
Trim39-203ENSMUST00000113706 DspE9Q557 2883 aaKnown RBP12.96□□□□□ -0.33
Trim39-203ENSMUST00000113706 Tmem116A0A0G2JGD3 401 aa12.96□□□□□ -0.33
Trim39-203ENSMUST00000113706 Olfr284A0A0U1RP76 321 aa12.96□□□□□ -0.33
Trim39-203ENSMUST00000113706 SpxD3Z752 116 aa12.96□□□□□ -0.33
Trim39-203ENSMUST00000113706 IfngP01580 155 aa12.96□□□□□ -0.33
Trim39-203ENSMUST00000113706 P01759 136 aa12.96□□□□□ -0.33
Trim39-203ENSMUST00000113706 P04942 107 aa12.96□□□□□ -0.33
Trim39-203ENSMUST00000113706 CryzP47199 331 aa12.96□□□□□ -0.33
Trim39-203ENSMUST00000113706 NfybP63139 207 aa12.96□□□□□ -0.33
Trim39-203ENSMUST00000113706 Rab5aQ9CQD1 215 aa12.96□□□□□ -0.33
Trim39-203ENSMUST00000113706 RTRAFQ9CQE8 244 aa12.96□□□□□ -0.33
Trim39-203ENSMUST00000113706 Cspg4Q8VHY0 2327 aa12.96□□□□□ -0.34
Trim39-203ENSMUST00000113706 P18529 117 aa12.96□□□□□ -0.34
Trim39-203ENSMUST00000113706 Olfr1290Q7TQX8 312 aa12.96□□□□□ -0.34
Trim39-203ENSMUST00000113706 H2-M10.6Q85ZW5 330 aa12.96□□□□□ -0.34
Trim39-203ENSMUST00000113706 Fbxw26Q8BI58 466 aa12.96□□□□□ -0.34
Trim39-203ENSMUST00000113706 Olfr1370Q8VFG4 316 aa12.96□□□□□ -0.34
Trim39-203ENSMUST00000113706 Olfr1457Q8VFK3 317 aa12.96□□□□□ -0.34
Trim39-203ENSMUST00000113706 Rab27bQ99P58 218 aa12.96□□□□□ -0.34
Trim39-203ENSMUST00000113706 CapgP24452 352 aaKnown RBP12.95□□□□□ -0.34
Trim39-203ENSMUST00000113706 Rab11aP62492 216 aaKnown RBP12.95□□□□□ -0.34
Trim39-203ENSMUST00000113706 Rnase11Q5GAM9 192 aa12.95□□□□□ -0.34
Trim39-203ENSMUST00000113706 Tmem128Q9CZB9 163 aa12.95□□□□□ -0.34
Trim39-203ENSMUST00000113706 Atp6v1fQ9D1K2 119 aa12.95□□□□□ -0.34
Trim39-203ENSMUST00000113706 Rhebl1Q9D8T3 184 aa12.95□□□□□ -0.34
Trim39-203ENSMUST00000113706 Zfp972A2AW65 139 aa12.95□□□□□ -0.34
Trim39-203ENSMUST00000113706 Mtnd6P03925 172 aa12.95□□□□□ -0.34
Trim39-203ENSMUST00000113706 Gnb2P62880 340 aa12.95□□□□□ -0.34
Trim39-203ENSMUST00000113706 Trat1Q3UU67 187 aa12.95□□□□□ -0.34
Trim39-203ENSMUST00000113706 RhovQ8VDU1 236 aa12.95□□□□□ -0.34
Trim39-203ENSMUST00000113706 Olfr1155Q8VFR3 314 aa12.95□□□□□ -0.34
Trim39-203ENSMUST00000113706 Tmem167aQ9CR64 72 aa12.95□□□□□ -0.34
Trim39-203ENSMUST00000113706 Tln2Q71LX4 2375 aa12.95□□□□□ -0.34
Trim39-203ENSMUST00000113706 Ighv14-3A0A075B5R9 117 aa12.94□□□□□ -0.34
Trim39-203ENSMUST00000113706 Ighv9-3A0A0B4J1J5 117 aa12.94□□□□□ -0.34
Trim39-203ENSMUST00000113706 Gm9047B9EJX3 177 aa12.94□□□□□ -0.34
Trim39-203ENSMUST00000113706 P01796 113 aa12.94□□□□□ -0.34
Trim39-203ENSMUST00000113706 P01797 113 aa12.94□□□□□ -0.34
Trim39-203ENSMUST00000113706 P01799 113 aa12.94□□□□□ -0.34
Trim39-203ENSMUST00000113706 Dlx6P70397 175 aa12.94□□□□□ -0.34
Trim39-203ENSMUST00000113706 Wfdc8Q4KUS1 273 aa12.94□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 56.2 ms