Protein–RNA interactions for Protein: Q9D3I8

Rhox4a, Reproductive homeobox 4A, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4aQ9D3I8 Gm25239-201ENSMUST00000174915 86 ntBASIC27.28■■□□□ 1.96
Rhox4aQ9D3I8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Rhox4aQ9D3I8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Rhox4aQ9D3I8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Rhox4aQ9D3I8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Rhox4aQ9D3I8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
Rhox4aQ9D3I8 Psd-208ENSMUST00000224556 2034 ntBASIC25.65■■□□□ 1.7
Rhox4aQ9D3I8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Rhox4aQ9D3I8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Rhox4aQ9D3I8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Rhox4aQ9D3I8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rhox4aQ9D3I8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Rhox4aQ9D3I8 Gm15042-201ENSMUST00000120212 883 ntBASIC24.6■■□□□ 1.53
Rhox4aQ9D3I8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rhox4aQ9D3I8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Rhox4aQ9D3I8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rhox4aQ9D3I8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Rhox4aQ9D3I8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Rhox4aQ9D3I8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rhox4aQ9D3I8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rhox4aQ9D3I8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rhox4aQ9D3I8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Rhox4aQ9D3I8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Rhox4aQ9D3I8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24.19■■□□□ 1.46
Rhox4aQ9D3I8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rhox4aQ9D3I8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Rhox4aQ9D3I8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rhox4aQ9D3I8 Gm15045-201ENSMUST00000117359 883 ntBASIC24.06■■□□□ 1.44
Rhox4aQ9D3I8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.04■■□□□ 1.44
Rhox4aQ9D3I8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rhox4aQ9D3I8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rhox4aQ9D3I8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rhox4aQ9D3I8 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.74■■□□□ 1.39
Rhox4aQ9D3I8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rhox4aQ9D3I8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rhox4aQ9D3I8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rhox4aQ9D3I8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rhox4aQ9D3I8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.57■■□□□ 1.36
Rhox4aQ9D3I8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rhox4aQ9D3I8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rhox4aQ9D3I8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.48■■□□□ 1.35
Rhox4aQ9D3I8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rhox4aQ9D3I8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rhox4aQ9D3I8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rhox4aQ9D3I8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23.41■■□□□ 1.34
Rhox4aQ9D3I8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rhox4aQ9D3I8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Rhox4aQ9D3I8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rhox4aQ9D3I8 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rhox4aQ9D3I8 Gm24109-201ENSMUST00000175489 103 ntBASIC23.23■■□□□ 1.31
Rhox4aQ9D3I8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Rhox4aQ9D3I8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rhox4aQ9D3I8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rhox4aQ9D3I8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.1■■□□□ 1.29
Rhox4aQ9D3I8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.06■■□□□ 1.28
Rhox4aQ9D3I8 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.06■■□□□ 1.28
Rhox4aQ9D3I8 Gm23366-201ENSMUST00000175022 89 ntBASIC23.01■■□□□ 1.27
Rhox4aQ9D3I8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rhox4aQ9D3I8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Rhox4aQ9D3I8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rhox4aQ9D3I8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rhox4aQ9D3I8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Rhox4aQ9D3I8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Rhox4aQ9D3I8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rhox4aQ9D3I8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Rhox4aQ9D3I8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Rhox4aQ9D3I8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rhox4aQ9D3I8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Rhox4aQ9D3I8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.83■■□□□ 1.25
Rhox4aQ9D3I8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rhox4aQ9D3I8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rhox4aQ9D3I8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.79■■□□□ 1.24
Rhox4aQ9D3I8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rhox4aQ9D3I8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rhox4aQ9D3I8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Rhox4aQ9D3I8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rhox4aQ9D3I8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Rhox4aQ9D3I8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rhox4aQ9D3I8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rhox4aQ9D3I8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rhox4aQ9D3I8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22.58■■□□□ 1.21
Rhox4aQ9D3I8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Rhox4aQ9D3I8 Zxda-201ENSMUST00000117281 2621 ntBASIC22.58■■□□□ 1.2
Rhox4aQ9D3I8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rhox4aQ9D3I8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rhox4aQ9D3I8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rhox4aQ9D3I8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22.39■■□□□ 1.18
Rhox4aQ9D3I8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rhox4aQ9D3I8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rhox4aQ9D3I8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rhox4aQ9D3I8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rhox4aQ9D3I8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rhox4aQ9D3I8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.28■■□□□ 1.16
Rhox4aQ9D3I8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rhox4aQ9D3I8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rhox4aQ9D3I8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rhox4aQ9D3I8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Rhox4aQ9D3I8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rhox4aQ9D3I8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rhox4aQ9D3I8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms