RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Olfr1257Q8VGP0 309 aa17.12■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Bpifa5Q9CQX3 270 aa17.12■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 H2al3Q9D4U4 128 aa17.12■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Trem3Q9JKE1 183 aa17.12■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Olfr419E9Q0Y7 313 aa17.11■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Gm10665K7N6B7 321 aa17.11■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Ifna2P01573 190 aa17.11■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 HbzP06467 142 aa17.11■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Hist1h1aP43275 213 aa17.11■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Dnajc30P59041 219 aa17.11■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Prok1Q14A28 105 aa17.11■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 KncnQ307W7 124 aa17.11■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Slc35e3Q6PGC7 313 aa17.11■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Lhfpl1Q80SV1 220 aa17.11■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Cacfd1Q8BG21 171 aa17.11■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 IrgcQ8C262 412 aa17.11■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Ms4a3Q920C4 213 aa17.11■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Arpc5Q9CPW4 151 aa17.11■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 RprmQ9JJ72 109 aa17.11■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Ighv5-17A0A075B5R1 117 aa17.1■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Ighv4-1A0A075B5R5 116 aa17.1■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Lgals9O08573 353 aaKnown RBP17.1■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 CntfrO88507 372 aa17.1■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Rps16P14131 146 aaKnown RBP17.1■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 G6pcP35576 357 aa17.1■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Vmn1r26Q8R2D7 339 aa17.1■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Olfr1099Q8VG37 312 aa17.1■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Olfr916Q8VG53 310 aa17.1■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Olfr206Q8VGP9 306 aa17.1■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 PpifQ99KR7 206 aaKnown RBP17.1■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Ociad1Q9CRD0 247 aaKnown RBP17.1■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Fam162bQ9CX19 157 aa17.1■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Platr25A0A1Y7VIZ1 466 aa17.1■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Tmsb15aA2AEH9 79 aa17.1■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Olfr432E9Q8M2 312 aa17.1■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 MidnQ3TPJ7 465 aa17.1■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Usf2Q64705 346 aaKnown RBP17.1■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Dmrtc1c1Q9D410 238 aa17.1■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Ppp1r1aQ9ERT9 171 aa17.1■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Abca2P41234 2434 aa17.1■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Tmem139E9PX92 214 aa17.09■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Zfp160E9Q459 650 aa17.09■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Olfr1329L7MTV4 313 aa17.09■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Gm3633L7N233 213 aa17.09■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Gm9611L7N476 213 aa17.09■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Degs1O09005 323 aa17.09■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Gfi1bO70237 330 aa17.09■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 P18528 98 aa17.09■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 PkiaP63248 76 aa17.09■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 SlpiP97430 131 aa17.09■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Rnase11Q5GAM9 192 aa17.09■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 TpppQ7TQD2 218 aaKnown RBP17.09■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Lrrc20Q8CI70 184 aa17.09■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 GrhprQ91Z53 328 aa17.09■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Hdhd3Q9CYW4 251 aa17.09■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Fkbp11Q9D1M7 201 aa17.09■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Fbp1Q9QXD6 338 aa17.09■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Bex3Q9WTZ9 124 aa17.09■□□□□ 0.33
Ccdc88a-202ENSMUST00000109477 Olfr1532-ps1A0A0R4J8U2 307 aa17.08■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Aadacl4B1AVU5 407 aa17.08■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Olfr466E9Q2B9 308 aa17.08■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Olfr707K7N662 307 aa17.08■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Gosr1O88630 250 aa17.08■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Fam216bQ8CC14 138 aa17.08■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Vmn1r62Q8R2C0 300 aa17.08■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Snx18Q91ZR2 614 aa17.08■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Olfr465-ps1A0A0U1RPZ4 315 aa17.07■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Gm10037E9PX85 104 aa17.07■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Dnd1Q6VY05 352 aa17.07■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Olfr1183Q8VFF8 303 aa17.07■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Olfr362Q8VGV7 317 aa17.07■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Rab27bQ99P58 218 aa17.07■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Slc50a1Q9CXK4 221 aa17.07■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Osr1Q9WVG7 266 aa17.07■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Dido1Q8C9B9 2256 aaKnown RBP17.07■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Ighv14-2A0A075B5R7 117 aa17.07■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Fcrl6A1YIY0 268 aa17.07■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Tmem200bD3Z0P8 284 aa17.07■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Rabl2E9Q9D5 223 aa17.07■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Gm8677K9J7G9 307 aa17.07■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Cpne2P59108 548 aa17.07■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 EcscrQ3TZW0 214 aa17.07■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 CrygcQ61597 174 aa17.07■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 AgaQ64191 346 aa17.07■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Olfr193Q7TS43 309 aa17.07■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Olfr123Q8VFQ1 309 aa17.07■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Q9DAL9 119 aa17.07■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Slc22a5Q9Z0E8 557 aa17.07■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Akap13E9Q394 2776 aa17.06■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Gm12887B1AVM1 119 aa17.06■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Cd209gD3Z5D4 194 aa17.06■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Hoxa1P09022 331 aa17.06■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Tgfbr1Q64729 503 aa17.06■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Znrd1Q791N7 123 aa17.06■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Olfr1225Q7TR01 311 aa17.06■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Gm9958Q8C9U4 106 aa17.06■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Olfr338Q8VGK6 306 aa17.06■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Polr3kQ9CQZ7 108 aa17.06■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Tceal8Q9CZY2 117 aa17.06■□□□□ 0.32
Ccdc88a-202ENSMUST00000109477 Arpc5lQ9D898 153 aa17.06■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms