RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 ASB13Q8WXK3 278 aa3.52□□□□□ -1.85
HERC1-213ENST00000561359 AP3S1Q92572 193 aa3.52□□□□□ -1.85
HERC1-213ENST00000561359 RAB3CQ96E17 227 aa3.52□□□□□ -1.85
HERC1-213ENST00000561359 RRNAD1Q96FB5 475 aaKnown RBP3.52□□□□□ -1.85
HERC1-213ENST00000561359 DIRAS2Q96HU8 199 aa3.52□□□□□ -1.85
HERC1-213ENST00000561359 SEC11CQ9BY50 192 aa3.52□□□□□ -1.85
HERC1-213ENST00000561359 MGAT4CQ9UBM8 478 aa3.52□□□□□ -1.85
HERC1-213ENST00000561359 IGKV1D-8A0A087WSZ0 117 aa3.51□□□□□ -1.85
HERC1-213ENST00000561359 METTL21EPA6NDL7 271 aa3.51□□□□□ -1.85
HERC1-213ENST00000561359 M0R2Z0 102 aa3.51□□□□□ -1.85
HERC1-213ENST00000561359 PRAF2O60831 178 aa3.51□□□□□ -1.85
HERC1-213ENST00000561359 SCGB2A1O75556 95 aa3.51□□□□□ -1.85
HERC1-213ENST00000561359 MT-ND4LP03901 98 aa3.51□□□□□ -1.85
HERC1-213ENST00000561359 CXCL2P19875 107 aa3.51□□□□□ -1.85
HERC1-213ENST00000561359 RBX1P62877 108 aa3.51□□□□□ -1.85
HERC1-213ENST00000561359 CATR1Q13166 79 aa3.51□□□□□ -1.85
HERC1-213ENST00000561359 SPINK13Q1W4C9 94 aa3.51□□□□□ -1.85
HERC1-213ENST00000561359 LINC01620Q4KN68 170 aa3.51□□□□□ -1.85
HERC1-213ENST00000561359 PYY3Q5JQD4 70 aa3.51□□□□□ -1.85
HERC1-213ENST00000561359 MZT2AQ6P582 158 aa3.51□□□□□ -1.85
HERC1-213ENST00000561359 AHSA2Q719I0 299 aa3.51□□□□□ -1.85
HERC1-213ENST00000561359 OR51H1Q8NH63 302 aa3.51□□□□□ -1.85
HERC1-213ENST00000561359 THAP6Q8TBB0 222 aa3.51□□□□□ -1.85
HERC1-213ENST00000561359 CIRBP-AS1Q8TBR5 109 aa3.51□□□□□ -1.85
HERC1-213ENST00000561359 SECTM1Q8WVN6 248 aa3.51□□□□□ -1.85
HERC1-213ENST00000561359 APH1BQ8WW43 257 aa3.51□□□□□ -1.85
HERC1-213ENST00000561359 C16orf74Q96GX8 76 aa3.51□□□□□ -1.85
HERC1-213ENST00000561359 LINC01587Q99440 93 aa3.51□□□□□ -1.85
HERC1-213ENST00000561359 DPH3P1Q9H4G8 78 aa3.51□□□□□ -1.85
HERC1-213ENST00000561359 PLEKHA2Q9HB19 425 aa3.51□□□□□ -1.85
HERC1-213ENST00000561359 CCL28Q9NRJ3 127 aa3.51□□□□□ -1.85
HERC1-213ENST00000561359 SMCO4Q9NRQ5 59 aa3.51□□□□□ -1.85
HERC1-213ENST00000561359 CRCT1Q9UGL9 99 aa3.51□□□□□ -1.85
HERC1-213ENST00000561359 A0A0J9YX75 114 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 K7EP13 123 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 GAGE7O76087 117 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 CRYGDP07320 174 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 CTXN2P0C2S0 81 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 GAGE12FP0CL80 117 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 GAGE12GP0CL81 117 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 GAGE12IP0CL82 117 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 GABRB1P18505 474 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 ELK1P19419 428 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 CXCL3P19876 107 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 INPP1P49441 399 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 PSMB3P49720 205 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 CCR6P51684 374 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 TIRAPP58753 221 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 PRCDQ00LT1 54 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 TRAM1Q15629 374 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 RAB11BQ15907 218 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 SFXN4Q6P4A7 337 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 Q6ZRU5 148 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 TMUB2Q71RG4 321 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 SMIM15Q7Z3B0 74 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 TMEM144Q7Z5S9 345 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 CBLN2Q8IUK8 224 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 BAP18Q8IXM2 172 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 C10orf126Q8N4M7 172 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 LRTM2Q8N967 370 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 OR2T35Q8NGX2 323 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 TMEM203Q969S6 136 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 PHYHIPLQ96FC7 376 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 VSIG2Q96IQ7 327 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 MGLLQ99685 303 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 LINC00467Q9BRT7 94 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 FKBP11Q9NYL4 201 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 COMMD9Q9P000 198 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 DOK5Q9P104 306 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 PRNDQ9UKY0 176 aa3.5□□□□□ -1.85
HERC1-213ENST00000561359 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.49□□□□□ -1.85
HERC1-213ENST00000561359 TRAV12-2A0A075B6T6 113 aa3.49□□□□□ -1.85
HERC1-213ENST00000561359 TRAV5A0A0B4J249 113 aa3.49□□□□□ -1.85
HERC1-213ENST00000561359 GPR31O00270 319 aa3.49□□□□□ -1.85
HERC1-213ENST00000561359 CRXO43186 299 aaPredicted RBP3.49□□□□□ -1.85
HERC1-213ENST00000561359 GSTZ1O43708 216 aaPredicted RBP3.49□□□□□ -1.85
HERC1-213ENST00000561359 KRASP01116 189 aa3.49□□□□□ -1.85
HERC1-213ENST00000561359 IGKV1-17P01599 117 aa3.49□□□□□ -1.85
HERC1-213ENST00000561359 PPBPP02775 128 aa3.49□□□□□ -1.85
HERC1-213ENST00000561359 TCRBP04435 133 aa3.49□□□□□ -1.85
HERC1-213ENST00000561359 ZNF25P17030 456 aaPredicted RBP3.49□□□□□ -1.85
HERC1-213ENST00000561359 PSMA1P25786 263 aaKnown RBP3.49□□□□□ -1.85
HERC1-213ENST00000561359 S100A2P29034 98 aa3.49□□□□□ -1.85
HERC1-213ENST00000561359 BTCP35070 178 aa3.49□□□□□ -1.85
HERC1-213ENST00000561359 G6PCP35575 357 aa3.49□□□□□ -1.85
HERC1-213ENST00000561359 SNCAP37840 140 aa3.49□□□□□ -1.85
HERC1-213ENST00000561359 ERHP84090 104 aaKnown RBP3.49□□□□□ -1.85
HERC1-213ENST00000561359 MLLT11Q13015 90 aaPredicted RBP3.49□□□□□ -1.85
HERC1-213ENST00000561359 INSL4Q14641 139 aa3.49□□□□□ -1.85
HERC1-213ENST00000561359 TIGITQ495A1 244 aa3.49□□□□□ -1.85
HERC1-213ENST00000561359 AADACL3Q5VUY0 350 aa3.49□□□□□ -1.85
HERC1-213ENST00000561359 LPCAT3Q6P1A2 487 aa3.49□□□□□ -1.85
HERC1-213ENST00000561359 CNIH2Q6PI25 160 aa3.49□□□□□ -1.85
HERC1-213ENST00000561359 AMTNQ6UX39 209 aa3.49□□□□□ -1.85
HERC1-213ENST00000561359 ALKAL2Q6UX46 152 aa3.49□□□□□ -1.85
HERC1-213ENST00000561359 ZNF493Q6ZR52 646 aa3.49□□□□□ -1.85
HERC1-213ENST00000561359 Q6ZS49 121 aa3.49□□□□□ -1.85
HERC1-213ENST00000561359 ZFP82Q8N141 532 aa3.49□□□□□ -1.85
HERC1-213ENST00000561359 HSD17B11Q8NBQ5 300 aa3.49□□□□□ -1.85
HERC1-213ENST00000561359 BEST4Q8NFU0 473 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms