RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 LRP5O75197 1615 aa0.53□□□□□ -2.32
CCDC58-204ENST00000479414 HYDINQ4G0P3 5121 aa0.53□□□□□ -2.32
CCDC58-204ENST00000479414 BPTFQ12830 3046 aa0.53□□□□□ -2.32
CCDC58-204ENST00000479414 BIRC6Q9NR09 4857 aa0.53□□□□□ -2.32
CCDC58-204ENST00000479414 NUPR2A6NF83 97 aa0.53□□□□□ -2.32
CCDC58-204ENST00000479414 HIST1H2BKO60814 126 aa0.53□□□□□ -2.32
CCDC58-204ENST00000479414 HIST1H2BJP06899 126 aa0.53□□□□□ -2.32
CCDC58-204ENST00000479414 TAS2R41P59536 307 aa0.53□□□□□ -2.32
CCDC58-204ENST00000479414 BASP1P80723 227 aaKnown RBP0.53□□□□□ -2.32
CCDC58-204ENST00000479414 MIR22HGQ0VDD5 57 aa0.53□□□□□ -2.32
CCDC58-204ENST00000479414 CDC26Q8NHZ8 85 aa0.53□□□□□ -2.32
CCDC58-204ENST00000479414 AP3S1Q92572 193 aa0.53□□□□□ -2.32
CCDC58-204ENST00000479414 ANKRD17O75179 2603 aaKnown RBP0.53□□□□□ -2.32
CCDC58-204ENST00000479414 CHD6Q8TD26 2715 aa0.53□□□□□ -2.32
CCDC58-204ENST00000479414 BCL9O00512 1426 aa0.53□□□□□ -2.32
CCDC58-204ENST00000479414 NAV3Q8IVL0 2385 aa0.53□□□□□ -2.33
CCDC58-204ENST00000479414 LAMA2P24043 3122 aaKnown RBP0.52□□□□□ -2.33
CCDC58-204ENST00000479414 CELSR3Q9NYQ7 3312 aa0.52□□□□□ -2.33
CCDC58-204ENST00000479414 GLRXP35754 106 aa0.52□□□□□ -2.33
CCDC58-204ENST00000479414 FXYD4P59646 89 aa0.52□□□□□ -2.33
CCDC58-204ENST00000479414 HBBP68871 147 aa0.52□□□□□ -2.33
CCDC58-204ENST00000479414 FKBP1CQ5VVH2 108 aa0.52□□□□□ -2.33
CCDC58-204ENST00000479414 FOXI2Q6ZQN5 318 aa0.52□□□□□ -2.33
CCDC58-204ENST00000479414 PHF5AQ7RTV0 110 aaKnown RBP0.52□□□□□ -2.33
CCDC58-204ENST00000479414 LYG2Q86SG7 212 aa0.52□□□□□ -2.33
CCDC58-204ENST00000479414 HOPXQ9BPY8 73 aaPredicted RBP0.52□□□□□ -2.33
CCDC58-204ENST00000479414 MAP1LC3BQ9GZQ8 125 aa0.52□□□□□ -2.33
CCDC58-204ENST00000479414 TAF9BQ9HBM6 251 aa0.52□□□□□ -2.33
CCDC58-204ENST00000479414 UFC1Q9Y3C8 167 aa0.52□□□□□ -2.33
CCDC58-204ENST00000479414 USP9XQ93008 2570 aaPredicted RBP0.52□□□□□ -2.33
CCDC58-204ENST00000479414 HMGXB3Q12766 1538 aa0.52□□□□□ -2.33
CCDC58-204ENST00000479414 CFAP47Q6ZTR5 3102 aa0.52□□□□□ -2.33
CCDC58-204ENST00000479414 CHD8Q9HCK8 2581 aa0.51□□□□□ -2.33
CCDC58-204ENST00000479414 TRAV5A0A0B4J249 113 aa0.51□□□□□ -2.33
CCDC58-204ENST00000479414 APOA2P02652 100 aa0.51□□□□□ -2.33
CCDC58-204ENST00000479414 PPP1R2P41236 205 aa0.51□□□□□ -2.33
CCDC58-204ENST00000479414 SPINK9Q5DT21 86 aa0.51□□□□□ -2.33
CCDC58-204ENST00000479414 MYO18BQ8IUG5 2567 aa0.51□□□□□ -2.33
CCDC58-204ENST00000479414 NAV2Q8IVL1 2488 aa0.51□□□□□ -2.33
CCDC58-204ENST00000479414 FAM216BQ8N7L0 139 aa0.51□□□□□ -2.33
CCDC58-204ENST00000479414 ERBINQ96RT1 1412 aa0.51□□□□□ -2.33
CCDC58-204ENST00000479414 OTORQ9NRC9 128 aa0.51□□□□□ -2.33
CCDC58-204ENST00000479414 AHNAKQ09666 5890 aaKnown RBP0.51□□□□□ -2.33
CCDC58-204ENST00000479414 MUC5BQ9HC84 5762 aaPredicted RBP0.51□□□□□ -2.33
CCDC58-204ENST00000479414 EPG5Q9HCE0 2579 aa0.51□□□□□ -2.33
CCDC58-204ENST00000479414 EPPK1P58107 5090 aaKnown RBP0.5□□□□□ -2.33
CCDC58-204ENST00000479414 PIEZO1Q92508 2521 aa0.5□□□□□ -2.33
CCDC58-204ENST00000479414 IFNA4P05014 189 aa0.5□□□□□ -2.33
CCDC58-204ENST00000479414 KRTAP2-3P0C7H8 128 aa0.5□□□□□ -2.33
CCDC58-204ENST00000479414 ZCCHC23Q6ZST2 131 aa0.5□□□□□ -2.33
CCDC58-204ENST00000479414 NUP35Q8NFH5 326 aa0.5□□□□□ -2.33
CCDC58-204ENST00000479414 MALSU1Q96EH3 234 aa0.5□□□□□ -2.33
CCDC58-204ENST00000479414 KRTAP2-4Q9BYR9 128 aa0.5□□□□□ -2.33
CCDC58-204ENST00000479414 KRTAP2-1Q9BYU5 128 aa0.5□□□□□ -2.33
CCDC58-204ENST00000479414 UNC80Q8N2C7 3258 aa0.5□□□□□ -2.33
CCDC58-204ENST00000479414 VWFP04275 2813 aa0.5□□□□□ -2.33
CCDC58-204ENST00000479414 HECTD1Q9ULT8 2610 aa0.5□□□□□ -2.33
CCDC58-204ENST00000479414 STAB1Q9NY15 2570 aa0.5□□□□□ -2.33
CCDC58-204ENST00000479414 ABCA2Q9BZC7 2435 aa0.49□□□□□ -2.33
CCDC58-204ENST00000479414 PDE4DIPQ5VU43 2346 aa0.49□□□□□ -2.33
CCDC58-204ENST00000479414 NISCHQ9Y2I1 1504 aa0.49□□□□□ -2.33
CCDC58-204ENST00000479414 SPTBN5Q9NRC6 3674 aaKnown RBP0.49□□□□□ -2.33
CCDC58-204ENST00000479414 ITPR3Q14573 2671 aa0.49□□□□□ -2.33
CCDC58-204ENST00000479414 SETD2Q9BYW2 2564 aaPredicted RBP0.49□□□□□ -2.33
CCDC58-204ENST00000479414 VBP1P61758 197 aa0.49□□□□□ -2.33
CCDC58-204ENST00000479414 RTL8BQ17RB0 113 aa0.49□□□□□ -2.33
CCDC58-204ENST00000479414 OCIAD2Q56VL3 154 aa0.49□□□□□ -2.33
CCDC58-204ENST00000479414 SMR3AQ99954 134 aa0.49□□□□□ -2.33
CCDC58-204ENST00000479414 RTL8AQ9BWD3 113 aa0.49□□□□□ -2.33
CCDC58-204ENST00000479414 STOML2Q9UJZ1 356 aa0.49□□□□□ -2.33
CCDC58-204ENST00000479414 WDFY4Q6ZS81 3184 aa0.49□□□□□ -2.33
CCDC58-204ENST00000479414 DOPEY1Q5JWR5 2465 aa0.49□□□□□ -2.33
CCDC58-204ENST00000479414 HERC1Q15751 4861 aa0.49□□□□□ -2.33
CCDC58-204ENST00000479414 KALRNO60229 2985 aa0.49□□□□□ -2.33
CCDC58-204ENST00000479414 ANKRD11Q6UB99 2663 aaPredicted RBP0.49□□□□□ -2.33
CCDC58-204ENST00000479414 ABCA13Q86UQ4 5058 aa0.48□□□□□ -2.33
CCDC58-204ENST00000479414 PTPN13Q12923 2485 aa0.48□□□□□ -2.33
CCDC58-204ENST00000479414 MEGF8Q7Z7M0 2845 aa0.48□□□□□ -2.33
CCDC58-204ENST00000479414 EIF3AQ14152 1382 aaKnown RBP0.48□□□□□ -2.33
CCDC58-204ENST00000479414 ZNF292O60281 2723 aa0.48□□□□□ -2.33
CCDC58-204ENST00000479414 DNAH12Q6ZR08 3092 aa0.48□□□□□ -2.33
CCDC58-204ENST00000479414 BOD1L1Q8NFC6 3051 aa0.48□□□□□ -2.33
CCDC58-204ENST00000479414 MACF1Q9UPN3 7388 aaKnown RBP0.48□□□□□ -2.33
CCDC58-204ENST00000479414 TMEM238C9JI98 176 aa0.48□□□□□ -2.33
CCDC58-204ENST00000479414 FOXA3P55318 350 aaPredicted RBP0.48□□□□□ -2.33
CCDC58-204ENST00000479414 CIRBPQ14011 172 aaKnown RBP0.48□□□□□ -2.33
CCDC58-204ENST00000479414 TMED4Q7Z7H5 227 aa0.48□□□□□ -2.33
CCDC58-204ENST00000479414 LINC00269Q8N2A0 174 aa0.48□□□□□ -2.33
CCDC58-204ENST00000479414 NIT2Q9NQR4 276 aa0.48□□□□□ -2.33
CCDC58-204ENST00000479414 RYR2Q92736 4967 aa0.48□□□□□ -2.33
CCDC58-204ENST00000479414 KMT2CQ8NEZ4 4911 aaKnown RBP0.48□□□□□ -2.33
CCDC58-204ENST00000479414 RAPGEF6Q8TEU7 1601 aa0.48□□□□□ -2.33
CCDC58-204ENST00000479414 RANBP2P49792 3224 aaKnown RBP0.48□□□□□ -2.33
CCDC58-204ENST00000479414 MDN1Q9NU22 5596 aa0.48□□□□□ -2.33
CCDC58-204ENST00000479414 KNTC1P50748 2209 aa0.48□□□□□ -2.33
CCDC58-204ENST00000479414 GCN1Q92616 2671 aaKnown RBP0.47□□□□□ -2.33
CCDC58-204ENST00000479414 CACNA1EQ15878 2313 aa0.47□□□□□ -2.33
CCDC58-204ENST00000479414 BDP1A6H8Y1 2624 aa0.47□□□□□ -2.33
CCDC58-204ENST00000479414 COL6A5A8TX70 2615 aa0.47□□□□□ -2.33
CCDC58-204ENST00000479414 FLNBO75369 2602 aaKnown RBP0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms