RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 AEBP2Q6ZN18 517 aaPredicted RBP28.29■■■□□ 2.12
CCDC58-204ENST00000479414 CHIC1Q5VXU3 224 aa27.8■■■□□ 2.04
CCDC58-204ENST00000479414 PHF23Q9BUL5 403 aaPredicted RBP24.45■■□□□ 1.5
CCDC58-204ENST00000479414 SENP3Q9H4L4 574 aaPredicted RBP24■■□□□ 1.43
CCDC58-204ENST00000479414 PLPPR3Q6T4P5 718 aa22.63■■□□□ 1.21
CCDC58-204ENST00000479414 FOXD1Q16676 465 aa22.24■■□□□ 1.15
CCDC58-204ENST00000479414 PPP6R1Q9UPN7 881 aa21.51■■□□□ 1.03
CCDC58-204ENST00000479414 ADRA2BP18089 450 aa21.49■■□□□ 1.03
CCDC58-204ENST00000479414 PIAS4Q8N2W9 510 aaPredicted RBP20.98■□□□□ 0.95
CCDC58-204ENST00000479414 MSH5O43196 834 aa20.45■□□□□ 0.86
CCDC58-204ENST00000479414 PPP4R3CPQ6ZMV5 832 aa19.96■□□□□ 0.79
CCDC58-204ENST00000479414 SCAF1Q9H7N4 1312 aaKnown RBP19.69■□□□□ 0.74
CCDC58-204ENST00000479414 KCNA4P22459 653 aa19.66■□□□□ 0.74
CCDC58-204ENST00000479414 NCBP3Q53F19 620 aaKnown RBP19.49■□□□□ 0.71
CCDC58-204ENST00000479414 MAPK8IP2Q13387 824 aaPredicted RBP19.44■□□□□ 0.7
CCDC58-204ENST00000479414 CNKSR2Q8WXI2 1034 aa19.37■□□□□ 0.69
CCDC58-204ENST00000479414 NPM3O75607 178 aaKnown RBP19.19■□□□□ 0.66
CCDC58-204ENST00000479414 DMRT2Q9Y5R5 561 aa19.19■□□□□ 0.66
CCDC58-204ENST00000479414 RNF216Q9NWF9 866 aaPredicted RBP18.96■□□□□ 0.63
CCDC58-204ENST00000479414 HOXD11P31277 338 aaPredicted RBP18.86■□□□□ 0.61
CCDC58-204ENST00000479414 SLC4A1APQ9BWU0 796 aaKnown RBP18.75■□□□□ 0.59
CCDC58-204ENST00000479414 DNAJC5BQ9UF47 199 aa18.72■□□□□ 0.59
CCDC58-204ENST00000479414 POTEDQ86YR6 584 aa18.34■□□□□ 0.53
CCDC58-204ENST00000479414 EHMT2Q96KQ7 1210 aa18.34■□□□□ 0.53
CCDC58-204ENST00000479414 DCAF8L1A6NGE4 600 aa18.26■□□□□ 0.51
CCDC58-204ENST00000479414 CSRNP3Q8WYN3 585 aa18.13■□□□□ 0.49
CCDC58-204ENST00000479414 ZBTB22O15209 634 aa18.1■□□□□ 0.49
CCDC58-204ENST00000479414 SLC4A2P04920 1241 aa18.1■□□□□ 0.49
CCDC58-204ENST00000479414 FOXD4L1Q9NU39 408 aa18.07■□□□□ 0.48
CCDC58-204ENST00000479414 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.92■□□□□ 0.46
CCDC58-204ENST00000479414 MYCNP04198 464 aaPredicted RBP17.75■□□□□ 0.43
CCDC58-204ENST00000479414 U3KPZ7 1027 aaPredicted RBP17.68■□□□□ 0.42
CCDC58-204ENST00000479414 RNF39Q9H2S5 420 aa17.55■□□□□ 0.4
CCDC58-204ENST00000479414 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.52■□□□□ 0.4
CCDC58-204ENST00000479414 HNRNPUL2Q1KMD3 747 aaKnown RBP17.52■□□□□ 0.4
CCDC58-204ENST00000479414 ATXN8OSP0DMR3 200 aa17.46■□□□□ 0.39
CCDC58-204ENST00000479414 SAMD1Q6SPF0 538 aaPredicted RBP17.46■□□□□ 0.39
CCDC58-204ENST00000479414 C1QBPQ07021 282 aaKnown RBP17.35■□□□□ 0.37
CCDC58-204ENST00000479414 APLP2Q06481 763 aa17.3■□□□□ 0.36
CCDC58-204ENST00000479414 ATF5Q9Y2D1 282 aaPredicted RBP17.23■□□□□ 0.35
CCDC58-204ENST00000479414 SPINK5Q9NQ38 1064 aaPredicted RBP17.12■□□□□ 0.33
CCDC58-204ENST00000479414 ZNF219Q9P2Y4 722 aaPredicted RBP17.03■□□□□ 0.32
CCDC58-204ENST00000479414 CAPN15O75808 1086 aa17.02■□□□□ 0.32
CCDC58-204ENST00000479414 TRHP20396 242 aaPredicted RBP16.97■□□□□ 0.31
CCDC58-204ENST00000479414 CACNB1Q02641 598 aaPredicted RBP16.93■□□□□ 0.3
CCDC58-204ENST00000479414 POLA2Q14181 598 aa16.75■□□□□ 0.27
CCDC58-204ENST00000479414 DSG3P32926 999 aa16.74■□□□□ 0.27
CCDC58-204ENST00000479414 ABCB7O75027 752 aa16.7■□□□□ 0.26
CCDC58-204ENST00000479414 ZBTB12Q9Y330 459 aaPredicted RBP16.53■□□□□ 0.24
CCDC58-204ENST00000479414 MKRN4PQ13434 485 aaPredicted RBP16.52■□□□□ 0.24
CCDC58-204ENST00000479414 FBLN2P98095 1184 aa16.51■□□□□ 0.23
CCDC58-204ENST00000479414 FKBP8Q14318 412 aa16.34■□□□□ 0.21
CCDC58-204ENST00000479414 SPDYE4A6NLX3 237 aa16.2■□□□□ 0.18
CCDC58-204ENST00000479414 OSCARQ8IYS5 282 aa16.18■□□□□ 0.18
CCDC58-204ENST00000479414 SPDYE2BA6NHP3 402 aa16.1■□□□□ 0.17
CCDC58-204ENST00000479414 SPDYE6P0CI01 402 aa16.1■□□□□ 0.17
CCDC58-204ENST00000479414 SPDYE2Q495Y8 402 aa16.1■□□□□ 0.17
CCDC58-204ENST00000479414 PROM2Q8N271 834 aa16.02■□□□□ 0.16
CCDC58-204ENST00000479414 ZNF692Q9BU19 519 aaPredicted RBP16.02■□□□□ 0.16
CCDC58-204ENST00000479414 SSUH2Q9Y2M2 353 aa16■□□□□ 0.15
CCDC58-204ENST00000479414 RBM42Q9BTD8 480 aaKnown RBP15.96■□□□□ 0.15
CCDC58-204ENST00000479414 PABPN1Q86U42 306 aaKnown RBP eCLIP15.81■□□□□ 0.12
CCDC58-204ENST00000479414 AKT1S1Q96B36 256 aa15.8■□□□□ 0.12
CCDC58-204ENST00000479414 FBXO3Q9UK99 471 aa15.76■□□□□ 0.11
CCDC58-204ENST00000479414 REM2Q8IYK8 340 aaPredicted RBP15.63■□□□□ 0.09
CCDC58-204ENST00000479414 STAG3Q9UJ98 1225 aa15.62■□□□□ 0.09
CCDC58-204ENST00000479414 SPDYE1Q8NFV5 336 aaPredicted RBP15.57■□□□□ 0.08
CCDC58-204ENST00000479414 VASPP50552 380 aaPredicted RBP15.54■□□□□ 0.08
CCDC58-204ENST00000479414 PITPNM1O00562 1244 aa15.44■□□□□ 0.06
CCDC58-204ENST00000479414 CLEC11AQ9Y240 323 aa15.43■□□□□ 0.06
CCDC58-204ENST00000479414 PRR29P0C7W0 189 aa15.35■□□□□ 0.05
CCDC58-204ENST00000479414 IFNLR1Q8IU57 520 aaPredicted RBP15.33■□□□□ 0.04
CCDC58-204ENST00000479414 MIER1Q8N108 512 aa15.32■□□□□ 0.04
CCDC58-204ENST00000479414 PLCD3Q8N3E9 789 aa15.32■□□□□ 0.04
CCDC58-204ENST00000479414 PLEKHG5O94827 1062 aa15.24■□□□□ 0.03
CCDC58-204ENST00000479414 CREBZFQ9NS37 354 aa15.22■□□□□ 0.03
CCDC58-204ENST00000479414 CHRDL2Q6WN34 429 aa15.21■□□□□ 0.03
CCDC58-204ENST00000479414 AMER1Q5JTC6 1135 aaPredicted RBP15.2■□□□□ 0.02
CCDC58-204ENST00000479414 KLHL34Q8N239 644 aa15.19■□□□□ 0.02
CCDC58-204ENST00000479414 ZBTB47Q9UFB7 747 aaPredicted RBP15.18■□□□□ 0.02
CCDC58-204ENST00000479414 FXR2P51116 673 aaKnown RBP eCLIP15.15■□□□□ 0.02
CCDC58-204ENST00000479414 RTN4Q9NQC3 1192 aaKnown RBP15.14■□□□□ 0.01
CCDC58-204ENST00000479414 SPOCK2Q92563 424 aa15.13■□□□□ 0.01
CCDC58-204ENST00000479414 MNX1P50219 401 aaPredicted RBP15.1■□□□□ 0.01
CCDC58-204ENST00000479414 PIP4P2Q8N4L2 257 aa15.06■□□□□ 0
CCDC58-204ENST00000479414 PRKAR2AP13861 404 aaKnown RBP15.05■□□□□ -0
CCDC58-204ENST00000479414 CHADLQ6NUI6 762 aa15.05■□□□□ -0
CCDC58-204ENST00000479414 FARP1Q9Y4F1 1045 aaPredicted RBP14.97□□□□□ -0.01
CCDC58-204ENST00000479414 NPM1P06748 294 aaKnown RBP eCLIP14.96□□□□□ -0.01
CCDC58-204ENST00000479414 NUBP1P53384 320 aa14.96□□□□□ -0.01
CCDC58-204ENST00000479414 PKD2Q13563 968 aa14.89□□□□□ -0.03
CCDC58-204ENST00000479414 RASEFQ8IZ41 740 aa14.84□□□□□ -0.03
CCDC58-204ENST00000479414 GSE1Q14687 1217 aa14.83□□□□□ -0.04
CCDC58-204ENST00000479414 FAM212AQ96EL1 285 aa14.82□□□□□ -0.04
CCDC58-204ENST00000479414 CIZ1Q9ULV3 898 aaPredicted RBP14.82□□□□□ -0.04
CCDC58-204ENST00000479414 DCAF8Q5TAQ9 597 aa14.78□□□□□ -0.04
CCDC58-204ENST00000479414 TRIM41Q8WV44 630 aa14.76□□□□□ -0.05
CCDC58-204ENST00000479414 ECM2O94769 699 aaPredicted RBP14.73□□□□□ -0.05
CCDC58-204ENST00000479414 TSPYL2Q9H2G4 693 aaPredicted RBP14.69□□□□□ -0.06
CCDC58-204ENST00000479414 PAK3O75914 559 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms