RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 S100A7AQ86SG5 101 aa6.29□□□□□ -1.4
GTF3A-206ENST00000470606 LYPD1Q8N2G4 141 aa6.29□□□□□ -1.4
GTF3A-206ENST00000470606 HIST1H2BAQ96A08 127 aa6.29□□□□□ -1.4
GTF3A-206ENST00000470606 YPEL4Q96NS1 127 aa6.29□□□□□ -1.4
GTF3A-206ENST00000470606 ATG101Q9BSB4 218 aa6.29□□□□□ -1.4
GTF3A-206ENST00000470606 IGKV3-7A0A075B6H7 116 aa6.29□□□□□ -1.4
GTF3A-206ENST00000470606 LINC01619G3V211 115 aa6.29□□□□□ -1.4
GTF3A-206ENST00000470606 ZNF253O75346 499 aa6.29□□□□□ -1.4
GTF3A-206ENST00000470606 ATF4P18848 351 aaPredicted RBP6.29□□□□□ -1.4
GTF3A-206ENST00000470606 CBLN1P23435 193 aa6.29□□□□□ -1.4
GTF3A-206ENST00000470606 GALR1P47211 349 aa6.29□□□□□ -1.4
GTF3A-206ENST00000470606 PNRC1Q12796 327 aaPredicted RBP6.29□□□□□ -1.4
GTF3A-206ENST00000470606 RHEBQ15382 184 aa6.29□□□□□ -1.4
GTF3A-206ENST00000470606 TMEM183BQ1AE95 376 aa6.29□□□□□ -1.4
GTF3A-206ENST00000470606 LINC00322Q6ZN03 302 aaPredicted RBP6.29□□□□□ -1.4
GTF3A-206ENST00000470606 C1QL4Q86Z23 238 aa6.29□□□□□ -1.4
GTF3A-206ENST00000470606 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.29□□□□□ -1.4
GTF3A-206ENST00000470606 GPR82Q96P67 336 aa6.29□□□□□ -1.4
GTF3A-206ENST00000470606 MLST8Q9BVC4 326 aa6.29□□□□□ -1.4
GTF3A-206ENST00000470606 MLXQ9UH92 298 aa6.29□□□□□ -1.4
GTF3A-206ENST00000470606 RNF24Q9Y225 148 aa6.29□□□□□ -1.4
GTF3A-206ENST00000470606 IGKV2-40A0A087WW87 121 aaPredicted RBP6.28□□□□□ -1.4
GTF3A-206ENST00000470606 TSPAN4O14817 238 aa6.28□□□□□ -1.4
GTF3A-206ENST00000470606 IGKV2D-40P01614 121 aaPredicted RBP6.28□□□□□ -1.4
GTF3A-206ENST00000470606 FOLR2P14207 255 aa6.28□□□□□ -1.4
GTF3A-206ENST00000470606 FAM24BQ8N5W8 94 aa6.28□□□□□ -1.4
GTF3A-206ENST00000470606 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.28□□□□□ -1.4
GTF3A-206ENST00000470606 WFDC12Q8WWY7 111 aa6.28□□□□□ -1.4
GTF3A-206ENST00000470606 VGLL1Q99990 258 aa6.28□□□□□ -1.4
GTF3A-206ENST00000470606 TCEAL7Q9BRU2 100 aa6.28□□□□□ -1.4
GTF3A-206ENST00000470606 UFC1Q9Y3C8 167 aa6.28□□□□□ -1.4
GTF3A-206ENST00000470606 A0A087WWC5 75 aa6.27□□□□□ -1.41
GTF3A-206ENST00000470606 LTAP01374 205 aa6.27□□□□□ -1.41
GTF3A-206ENST00000470606 GNG4P50150 75 aa6.27□□□□□ -1.41
GTF3A-206ENST00000470606 CNN1P51911 297 aaKnown RBP6.27□□□□□ -1.41
GTF3A-206ENST00000470606 TAS2R60P59551 318 aa6.27□□□□□ -1.41
GTF3A-206ENST00000470606 PSG9Q00887 426 aa6.27□□□□□ -1.41
GTF3A-206ENST00000470606 LCN12Q6JVE5 192 aa6.27□□□□□ -1.41
GTF3A-206ENST00000470606 Q86TA4 180 aa6.27□□□□□ -1.41
GTF3A-206ENST00000470606 GBGT1Q8N5D6 347 aa6.27□□□□□ -1.41
GTF3A-206ENST00000470606 CMTM2Q8TAZ6 248 aa6.27□□□□□ -1.41
GTF3A-206ENST00000470606 DCANP1Q8TF63 244 aa6.27□□□□□ -1.41
GTF3A-206ENST00000470606 TSSC4Q9Y5U2 329 aaPredicted RBP6.27□□□□□ -1.41
GTF3A-206ENST00000470606 A0A1W2PS18 150 aa6.27□□□□□ -1.41
GTF3A-206ENST00000470606 COLCA2A8K830 154 aa6.27□□□□□ -1.41
GTF3A-206ENST00000470606 CCL24O00175 119 aa6.27□□□□□ -1.41
GTF3A-206ENST00000470606 GCGP01275 180 aa6.27□□□□□ -1.41
GTF3A-206ENST00000470606 CSN3P07498 182 aa6.27□□□□□ -1.41
GTF3A-206ENST00000470606 ZNF705DP0CH99 300 aaPredicted RBP6.27□□□□□ -1.41
GTF3A-206ENST00000470606 ZNF705BP0CI00 300 aaPredicted RBP6.27□□□□□ -1.41
GTF3A-206ENST00000470606 ERCC8Q13216 396 aa6.27□□□□□ -1.41
GTF3A-206ENST00000470606 TCF24Q7RTU0 167 aa6.27□□□□□ -1.41
GTF3A-206ENST00000470606 BAGE2Q86Y30 109 aa6.27□□□□□ -1.41
GTF3A-206ENST00000470606 OR9G4Q8NGQ1 327 aa6.27□□□□□ -1.41
GTF3A-206ENST00000470606 RNASE7Q9H1E1 156 aaKnown RBP6.27□□□□□ -1.41
GTF3A-206ENST00000470606 AAMDCQ9H7C9 122 aa6.27□□□□□ -1.41
GTF3A-206ENST00000470606 NRN1Q9NPD7 142 aa6.27□□□□□ -1.41
GTF3A-206ENST00000470606 LY96Q9Y6Y9 160 aa6.27□□□□□ -1.41
GTF3A-206ENST00000470606 B4DEV8 164 aa6.26□□□□□ -1.41
GTF3A-206ENST00000470606 S100A7P31151 101 aa6.26□□□□□ -1.41
GTF3A-206ENST00000470606 RPL11P62913 178 aaKnown RBP6.26□□□□□ -1.41
GTF3A-206ENST00000470606 PSG3Q16557 428 aa6.26□□□□□ -1.41
GTF3A-206ENST00000470606 TMEM75Q8N9X5 138 aa6.26□□□□□ -1.41
GTF3A-206ENST00000470606 SPATA3Q8NHX4 192 aa6.26□□□□□ -1.41
GTF3A-206ENST00000470606 Q8TAT8 98 aa6.26□□□□□ -1.41
GTF3A-206ENST00000470606 SFRP2Q96HF1 295 aa6.26□□□□□ -1.41
GTF3A-206ENST00000470606 FMC1Q96HJ9 113 aa6.26□□□□□ -1.41
GTF3A-206ENST00000470606 SLC50A1Q9BRV3 221 aa6.26□□□□□ -1.41
GTF3A-206ENST00000470606 GPR61Q9BZJ8 451 aa6.26□□□□□ -1.41
GTF3A-206ENST00000470606 URGCP-MRPS24S4R325 110 aa6.26□□□□□ -1.41
GTF3A-206ENST00000470606 F6UB75 175 aa6.25□□□□□ -1.41
GTF3A-206ENST00000470606 CRIP1P50238 77 aa6.25□□□□□ -1.41
GTF3A-206ENST00000470606 UBE2G1P62253 170 aa6.25□□□□□ -1.41
GTF3A-206ENST00000470606 FLI1Q01543 452 aaPredicted RBP6.25□□□□□ -1.41
GTF3A-206ENST00000470606 PRNTQ86SH4 94 aa6.25□□□□□ -1.41
GTF3A-206ENST00000470606 DPF1Q92782 380 aa6.25□□□□□ -1.41
GTF3A-206ENST00000470606 GRAMD2BQ96HH9 432 aa6.25□□□□□ -1.41
GTF3A-206ENST00000470606 C16orf92Q96LL3 132 aa6.25□□□□□ -1.41
GTF3A-206ENST00000470606 C8orf49Q96NF6 230 aa6.25□□□□□ -1.41
GTF3A-206ENST00000470606 MS4A6AQ9H2W1 248 aa6.25□□□□□ -1.41
GTF3A-206ENST00000470606 SMCO4Q9NRQ5 59 aa6.25□□□□□ -1.41
GTF3A-206ENST00000470606 PSG8Q9UQ74 426 aa6.25□□□□□ -1.41
GTF3A-206ENST00000470606 TRBV6-1A0A0K0K1D8 114 aa6.25□□□□□ -1.41
GTF3A-206ENST00000470606 PFN1P07737 140 aaKnown RBP6.25□□□□□ -1.41
GTF3A-206ENST00000470606 CXCL1P09341 107 aa6.25□□□□□ -1.41
GTF3A-206ENST00000470606 FOXL1Q12952 345 aa6.25□□□□□ -1.41
GTF3A-206ENST00000470606 ELOBQ15370 118 aa6.25□□□□□ -1.41
GTF3A-206ENST00000470606 NSUN5P1Q3KNT7 163 aa6.25□□□□□ -1.41
GTF3A-206ENST00000470606 PRIMA1Q86XR5 153 aa6.25□□□□□ -1.41
GTF3A-206ENST00000470606 ZC2HC1AQ96GY0 325 aa6.25□□□□□ -1.41
GTF3A-206ENST00000470606 TUBA4BQ9H853 241 aa6.25□□□□□ -1.41
GTF3A-206ENST00000470606 TMEM242Q9NWH2 141 aa6.25□□□□□ -1.41
GTF3A-206ENST00000470606 V9GYV3 84 aa6.25□□□□□ -1.41
GTF3A-206ENST00000470606 TGIF2-C20orf24A0A0A6YYL0 155 aa6.24□□□□□ -1.41
GTF3A-206ENST00000470606 IZUMO1RA6ND01 250 aa6.24□□□□□ -1.41
GTF3A-206ENST00000470606 CA1P00915 261 aaPredicted RBP6.24□□□□□ -1.41
GTF3A-206ENST00000470606 MT-ND4LP03901 98 aa6.24□□□□□ -1.41
GTF3A-206ENST00000470606 MGST1P10620 155 aaKnown RBP6.24□□□□□ -1.41
GTF3A-206ENST00000470606 TFPI2P48307 235 aa6.24□□□□□ -1.41
GTF3A-206ENST00000470606 ZNF80P51504 273 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms