RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 IGHV3OR16-10A0A075B7F0 116 aa10.73□□□□□ -0.69
PRAME-202ENST00000398743 TRBV7-1A0A0A6YYK4 115 aa10.73□□□□□ -0.69
PRAME-202ENST00000398743 IGHV1-69DA0A0B4J2H0 117 aa10.73□□□□□ -0.69
PRAME-202ENST00000398743 IGHV4-61A0A0C4DH41 118 aa10.73□□□□□ -0.69
PRAME-202ENST00000398743 BUB3O43684 328 aa10.73□□□□□ -0.69
PRAME-202ENST00000398743 IGHV1-69P01742 117 aa10.73□□□□□ -0.69
PRAME-202ENST00000398743 GATD1Q8NB37 220 aa10.73□□□□□ -0.69
PRAME-202ENST00000398743 SNHG12Q9BXW3 62 aa10.73□□□□□ -0.69
PRAME-202ENST00000398743 ZFHX3Q15911 3703 aa10.73□□□□□ -0.69
PRAME-202ENST00000398743 TMEM189A5PLL7 270 aa10.73□□□□□ -0.69
PRAME-202ENST00000398743 M0QZ24 198 aa10.73□□□□□ -0.69
PRAME-202ENST00000398743 SH2D1AO60880 128 aa10.73□□□□□ -0.69
PRAME-202ENST00000398743 BTF3P20290 206 aaKnown RBP10.73□□□□□ -0.69
PRAME-202ENST00000398743 SPATA45Q537H7 98 aa10.73□□□□□ -0.69
PRAME-202ENST00000398743 IGFL4Q6B9Z1 124 aa10.73□□□□□ -0.69
PRAME-202ENST00000398743 WNK2Q9Y3S1 2297 aa10.73□□□□□ -0.69
PRAME-202ENST00000398743 A0A087X0K7 114 aa10.72□□□□□ -0.69
PRAME-202ENST00000398743 TRAV40A0A0B4J280 105 aa10.72□□□□□ -0.69
PRAME-202ENST00000398743 NDUFS8O00217 210 aa10.72□□□□□ -0.69
PRAME-202ENST00000398743 IGHG4P01861 327 aa10.72□□□□□ -0.69
PRAME-202ENST00000398743 LINC00614P0C842 121 aa10.72□□□□□ -0.69
PRAME-202ENST00000398743 RAB4AP20338 218 aa10.72□□□□□ -0.69
PRAME-202ENST00000398743 CTRLP40313 264 aa10.72□□□□□ -0.69
PRAME-202ENST00000398743 PMCHL1Q16048 86 aa10.72□□□□□ -0.69
PRAME-202ENST00000398743 EBLN2Q6P2I7 272 aa10.72□□□□□ -0.69
PRAME-202ENST00000398743 C10orf105Q8TEF2 133 aa10.72□□□□□ -0.69
PRAME-202ENST00000398743 HLA-DMBP28068 263 aa10.72□□□□□ -0.69
PRAME-202ENST00000398743 LCN12Q6JVE5 192 aa10.72□□□□□ -0.69
PRAME-202ENST00000398743 BRD3OSQ6XYD6 125 aa10.72□□□□□ -0.69
PRAME-202ENST00000398743 Q8TAT8 98 aa10.72□□□□□ -0.69
PRAME-202ENST00000398743 VGLL1Q99990 258 aa10.72□□□□□ -0.69
PRAME-202ENST00000398743 TMSB15BA0A087X1C1 80 aa10.71□□□□□ -0.69
PRAME-202ENST00000398743 TRAV41A0A0B4J266 112 aa10.71□□□□□ -0.69
PRAME-202ENST00000398743 IGHV1-24A0A0C4DH33 117 aa10.71□□□□□ -0.69
PRAME-202ENST00000398743 CLPSL1A2RUU4 121 aa10.71□□□□□ -0.69
PRAME-202ENST00000398743 C2orf70A6NJV1 201 aa10.71□□□□□ -0.69
PRAME-202ENST00000398743 DMRTA1Q5VZB9 504 aa10.71□□□□□ -0.69
PRAME-202ENST00000398743 CLEC2AQ6UVW9 174 aa10.71□□□□□ -0.69
PRAME-202ENST00000398743 MRPL52Q86TS9 123 aaKnown RBP10.71□□□□□ -0.69
PRAME-202ENST00000398743 BMI1P35226 326 aa10.7□□□□□ -0.7
PRAME-202ENST00000398743 ATP5G2Q06055 141 aa10.7□□□□□ -0.7
PRAME-202ENST00000398743 PIFOQ8TCI5 191 aa10.7□□□□□ -0.7
PRAME-202ENST00000398743 PKD1L2Q7Z442 2459 aa10.7□□□□□ -0.7
PRAME-202ENST00000398743 TMEM8BA6NDV4 472 aa10.7□□□□□ -0.7
PRAME-202ENST00000398743 LYZL1Q6UWQ5 148 aa10.7□□□□□ -0.7
PRAME-202ENST00000398743 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.7□□□□□ -0.7
PRAME-202ENST00000398743 ZNF493Q6ZR52 646 aa10.7□□□□□ -0.7
PRAME-202ENST00000398743 METTL26Q96S19 204 aa10.7□□□□□ -0.7
PRAME-202ENST00000398743 SLC50A1Q9BRV3 221 aa10.7□□□□□ -0.7
PRAME-202ENST00000398743 TMEM70Q9BUB7 260 aa10.7□□□□□ -0.7
PRAME-202ENST00000398743 MEGF9Q9H1U4 602 aa10.7□□□□□ -0.7
PRAME-202ENST00000398743 CLEC5AQ9NY25 188 aa10.7□□□□□ -0.7
PRAME-202ENST00000398743 IGHV3-66A0A0C4DH42 116 aa10.69□□□□□ -0.7
PRAME-202ENST00000398743 FAM223BA6NKX1 122 aa10.69□□□□□ -0.7
PRAME-202ENST00000398743 CRIP2P52943 208 aaPredicted RBP10.69□□□□□ -0.7
PRAME-202ENST00000398743 ATP5J2P56134 94 aa10.69□□□□□ -0.7
PRAME-202ENST00000398743 CYB5R2Q6BCY4 276 aa10.69□□□□□ -0.7
PRAME-202ENST00000398743 FAM223AQ8IWN6 122 aa10.69□□□□□ -0.7
PRAME-202ENST00000398743 ATP6V0BQ99437 205 aa10.69□□□□□ -0.7
PRAME-202ENST00000398743 MED13LQ71F56 2210 aa10.69□□□□□ -0.7
PRAME-202ENST00000398743 LEPROTL1O95214 131 aa10.69□□□□□ -0.7
PRAME-202ENST00000398743 RPS20P60866 119 aaKnown RBP10.69□□□□□ -0.7
PRAME-202ENST00000398743 C19orf54Q5BKX5 351 aa10.69□□□□□ -0.7
PRAME-202ENST00000398743 ATOH7Q8N100 152 aa10.69□□□□□ -0.7
PRAME-202ENST00000398743 M0QZK8 103 aa10.68□□□□□ -0.7
PRAME-202ENST00000398743 ZNF80P51504 273 aaPredicted RBP10.68□□□□□ -0.7
PRAME-202ENST00000398743 KLHDC1Q8N7A1 406 aa10.68□□□□□ -0.7
PRAME-202ENST00000398743 LINC00527Q9UJ94 153 aa10.68□□□□□ -0.7
PRAME-202ENST00000398743 COL12A1Q99715 3063 aa10.68□□□□□ -0.7
PRAME-202ENST00000398743 IGHV3OR16-13A0A075B7E8 117 aa10.67□□□□□ -0.7
PRAME-202ENST00000398743 IGHV4-30-2A0A087WSY4 118 aa10.67□□□□□ -0.7
PRAME-202ENST00000398743 IGHV3-74A0A0B4J1X5 117 aa10.67□□□□□ -0.7
PRAME-202ENST00000398743 RBAKDNA6NC62 111 aa10.67□□□□□ -0.7
PRAME-202ENST00000398743 CSN3P07498 182 aa10.67□□□□□ -0.7
PRAME-202ENST00000398743 OR5AL1P0C617 328 aa10.67□□□□□ -0.7
PRAME-202ENST00000398743 IGHV4-38-2P0DP08 117 aa10.67□□□□□ -0.7
PRAME-202ENST00000398743 ZNF138P52744 262 aa10.67□□□□□ -0.7
PRAME-202ENST00000398743 NUTF2P61970 127 aaKnown RBP10.67□□□□□ -0.7
PRAME-202ENST00000398743 RNF182Q8N6D2 247 aa10.67□□□□□ -0.7
PRAME-202ENST00000398743 UQCR10Q9UDW1 63 aa10.67□□□□□ -0.7
PRAME-202ENST00000398743 PRAC2D3DTV9 90 aa10.67□□□□□ -0.7
PRAME-202ENST00000398743 CRXO43186 299 aaPredicted RBP10.67□□□□□ -0.7
PRAME-202ENST00000398743 TRGV3P03979 118 aa10.67□□□□□ -0.7
PRAME-202ENST00000398743 RNF224P0DH78 156 aa10.67□□□□□ -0.7
PRAME-202ENST00000398743 IGLC3P0DOY3 106 aa10.67□□□□□ -0.7
PRAME-202ENST00000398743 CFAP46Q8IYW2 2715 aa10.67□□□□□ -0.7
PRAME-202ENST00000398743 TMEM213A2RRL7 107 aa10.66□□□□□ -0.7
PRAME-202ENST00000398743 ZNF207O43670 478 aaKnown RBP10.66□□□□□ -0.7
PRAME-202ENST00000398743 SRSF2Q01130 221 aaKnown RBP10.66□□□□□ -0.7
PRAME-202ENST00000398743 ERCC8Q13216 396 aa10.66□□□□□ -0.7
PRAME-202ENST00000398743 FER1L6-AS1Q8NA97 138 aa10.66□□□□□ -0.7
PRAME-202ENST00000398743 TRAV9-2A0A087WT02 112 aa10.66□□□□□ -0.7
PRAME-202ENST00000398743 IGHV3-49A0A0A0MS15 119 aa10.66□□□□□ -0.7
PRAME-202ENST00000398743 FABP5P3A8MUU1 101 aa10.66□□□□□ -0.7
PRAME-202ENST00000398743 IGF1P05019 195 aa10.66□□□□□ -0.7
PRAME-202ENST00000398743 MSMBP08118 114 aa10.66□□□□□ -0.7
PRAME-202ENST00000398743 AP5S1Q9NUS5 200 aa10.66□□□□□ -0.7
PRAME-202ENST00000398743 U3KQE9 123 aa10.66□□□□□ -0.7
PRAME-202ENST00000398743 CACNA1AO00555 2505 aa10.66□□□□□ -0.7
PRAME-202ENST00000398743 AKAP6Q13023 2319 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms