RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 PAX9P55771 341 aa9.49□□□□□ -0.89
COL9A1-202ENST00000357250 TMEM219Q86XT9 240 aa9.49□□□□□ -0.89
COL9A1-202ENST00000357250 RNF166Q96A37 237 aaPredicted RBP9.49□□□□□ -0.89
COL9A1-202ENST00000357250 TMEM14CQ9P0S9 112 aa9.49□□□□□ -0.89
COL9A1-202ENST00000357250 HTN3P15516 51 aa9.48□□□□□ -0.89
COL9A1-202ENST00000357250 COL8A2P25067 703 aa9.48□□□□□ -0.89
COL9A1-202ENST00000357250 PIP4P2Q8N4L2 257 aa9.48□□□□□ -0.89
COL9A1-202ENST00000357250 LINC01356Q8N9X3 169 aa9.48□□□□□ -0.89
COL9A1-202ENST00000357250 Q8NFD4 153 aa9.48□□□□□ -0.89
COL9A1-202ENST00000357250 LIME1Q9H400 295 aa9.48□□□□□ -0.89
COL9A1-202ENST00000357250 LINC00527Q9UJ94 153 aa9.48□□□□□ -0.89
COL9A1-202ENST00000357250 POU2AF1Q16633 256 aa9.48□□□□□ -0.89
COL9A1-202ENST00000357250 YLPM1P49750 1951 aaKnown RBP9.48□□□□□ -0.89
COL9A1-202ENST00000357250 NUP210Q8TEM1 1887 aaPredicted RBP9.48□□□□□ -0.89
COL9A1-202ENST00000357250 C10orf91Q5T1B1 145 aa9.48□□□□□ -0.89
COL9A1-202ENST00000357250 IGLV3-9A0A075B6K5 115 aa9.48□□□□□ -0.89
COL9A1-202ENST00000357250 K7ENP7 123 aa9.48□□□□□ -0.89
COL9A1-202ENST00000357250 CD5LO43866 347 aa9.48□□□□□ -0.89
COL9A1-202ENST00000357250 SAA4P35542 130 aa9.48□□□□□ -0.89
COL9A1-202ENST00000357250 TMEM249Q2WGJ8 235 aa9.48□□□□□ -0.89
COL9A1-202ENST00000357250 PRR30Q53SZ7 412 aaPredicted RBP9.48□□□□□ -0.89
COL9A1-202ENST00000357250 PGPEP1Q9NXJ5 209 aa9.48□□□□□ -0.89
COL9A1-202ENST00000357250 KIAA1671Q9BY89 1806 aa9.47□□□□□ -0.89
COL9A1-202ENST00000357250 PRSS46E5RG02 174 aa9.47□□□□□ -0.89
COL9A1-202ENST00000357250 CRIM1Q9NZV1 1036 aa9.47□□□□□ -0.89
COL9A1-202ENST00000357250 A0A087WX48 190 aa9.47□□□□□ -0.89
COL9A1-202ENST00000357250 TRAV8-4A0A0B4J246 113 aa9.47□□□□□ -0.89
COL9A1-202ENST00000357250 TMEM158Q8WZ71 300 aa9.47□□□□□ -0.89
COL9A1-202ENST00000357250 LINC00205P59089 165 aa9.47□□□□□ -0.89
COL9A1-202ENST00000357250 CSTL1Q9H114 145 aa9.47□□□□□ -0.89
COL9A1-202ENST00000357250 LAMA3Q16787 3333 aa9.47□□□□□ -0.89
COL9A1-202ENST00000357250 TRAV8-1A0A0A6YYK1 113 aa9.47□□□□□ -0.89
COL9A1-202ENST00000357250 MYMXA0A1B0GTQ4 84 aa9.47□□□□□ -0.89
COL9A1-202ENST00000357250 LY6G5BQ8NDX9 201 aa9.47□□□□□ -0.89
COL9A1-202ENST00000357250 Q8TAT8 98 aa9.47□□□□□ -0.89
COL9A1-202ENST00000357250 C11orf52Q96A22 123 aa9.47□□□□□ -0.89
COL9A1-202ENST00000357250 ARFGEF3Q5TH69 2177 aa9.47□□□□□ -0.89
COL9A1-202ENST00000357250 IGHV4-39P01824 125 aa9.46□□□□□ -0.89
COL9A1-202ENST00000357250 ZC2HC1BQ5TFG8 222 aa9.46□□□□□ -0.89
COL9A1-202ENST00000357250 C8orf31Q8N9H6 132 aa9.46□□□□□ -0.89
COL9A1-202ENST00000357250 CCDC168Q8NDH2 2452 aa9.46□□□□□ -0.89
COL9A1-202ENST00000357250 TRBV19A0A075B6N1 114 aa9.46□□□□□ -0.89
COL9A1-202ENST00000357250 ZNF124Q15973 351 aa9.46□□□□□ -0.89
COL9A1-202ENST00000357250 TRPT1Q86TN4 253 aaKnown RBP9.46□□□□□ -0.89
COL9A1-202ENST00000357250 DLX4Q92988 240 aaPredicted RBP9.46□□□□□ -0.89
COL9A1-202ENST00000357250 SONP18583 2426 aaKnown RBP9.46□□□□□ -0.9
COL9A1-202ENST00000357250 SAP30O75446 220 aa9.46□□□□□ -0.9
COL9A1-202ENST00000357250 FCN3O75636 299 aa9.46□□□□□ -0.9
COL9A1-202ENST00000357250 LINC00158P58513 81 aa9.46□□□□□ -0.9
COL9A1-202ENST00000357250 CKS1BP61024 79 aa9.46□□□□□ -0.9
COL9A1-202ENST00000357250 NEGR1Q7Z3B1 354 aa9.46□□□□□ -0.9
COL9A1-202ENST00000357250 KAAG1Q9UBP8 84 aa9.46□□□□□ -0.9
COL9A1-202ENST00000357250 C5orf42Q9H799 3197 aa9.46□□□□□ -0.9
COL9A1-202ENST00000357250 TRAV12-3A0A0B4J271 114 aa9.46□□□□□ -0.9
COL9A1-202ENST00000357250 UNQ6494/PRO21346Q6UXR6 183 aa9.46□□□□□ -0.9
COL9A1-202ENST00000357250 Q6ZR03 302 aa9.46□□□□□ -0.9
COL9A1-202ENST00000357250 BPESC1Q9GZL8 116 aa9.46□□□□□ -0.9
COL9A1-202ENST00000357250 GNLYP22749 145 aa9.45□□□□□ -0.9
COL9A1-202ENST00000357250 AMN1Q8IY45 258 aa9.45□□□□□ -0.9
COL9A1-202ENST00000357250 LY6HO94772 140 aa9.45□□□□□ -0.9
COL9A1-202ENST00000357250 SRD5A1P18405 259 aa9.45□□□□□ -0.9
COL9A1-202ENST00000357250 FAM104BQ5XKR9 115 aa9.45□□□□□ -0.9
COL9A1-202ENST00000357250 C14orf178Q8N769 122 aaPredicted RBP9.45□□□□□ -0.9
COL9A1-202ENST00000357250 IGKV3D-20A0A0C4DH25 116 aa9.45□□□□□ -0.9
COL9A1-202ENST00000357250 ZNF503-AS2A6NEH8 195 aa9.45□□□□□ -0.9
COL9A1-202ENST00000357250 TNFRSF6BO95407 300 aa9.45□□□□□ -0.9
COL9A1-202ENST00000357250 C17orf58Q2M2W7 97 aa9.45□□□□□ -0.9
COL9A1-202ENST00000357250 S100A7L2Q5SY68 101 aa9.45□□□□□ -0.9
COL9A1-202ENST00000357250 ARMS2P0C7Q2 107 aa9.44□□□□□ -0.9
COL9A1-202ENST00000357250 TMEM95Q3KNT9 176 aa9.44□□□□□ -0.9
COL9A1-202ENST00000357250 ZNF664Q8N3J9 261 aa9.44□□□□□ -0.9
COL9A1-202ENST00000357250 C18orf32Q8TCD1 76 aa9.44□□□□□ -0.9
COL9A1-202ENST00000357250 TMEM141Q96I45 108 aa9.44□□□□□ -0.9
COL9A1-202ENST00000357250 RNF114Q9Y508 228 aa9.44□□□□□ -0.9
COL9A1-202ENST00000357250 C9JQL5 133 aa9.44□□□□□ -0.9
COL9A1-202ENST00000357250 C15orf65H3BRN8 121 aa9.44□□□□□ -0.9
COL9A1-202ENST00000357250 MSMBP08118 114 aa9.44□□□□□ -0.9
COL9A1-202ENST00000357250 WT1P19544 449 aaPredicted RBP9.44□□□□□ -0.9
COL9A1-202ENST00000357250 UBE2V1Q13404 147 aa9.44□□□□□ -0.9
COL9A1-202ENST00000357250 PLA2G2CQ5R387 149 aa9.44□□□□□ -0.9
COL9A1-202ENST00000357250 BRD3OSQ6XYD6 125 aa9.44□□□□□ -0.9
COL9A1-202ENST00000357250 IL17RELQ6ZVW7 336 aa9.44□□□□□ -0.9
COL9A1-202ENST00000357250 LSM4Q9Y4Z0 139 aaKnown RBP9.44□□□□□ -0.9
COL9A1-202ENST00000357250 TRGV1A0A0A0MS02 117 aa9.44□□□□□ -0.9
COL9A1-202ENST00000357250 IGKV1-39P01597 117 aa9.44□□□□□ -0.9
COL9A1-202ENST00000357250 IGKV1D-39P04432 117 aa9.44□□□□□ -0.9
COL9A1-202ENST00000357250 LOXP28300 417 aaPredicted RBP9.44□□□□□ -0.9
COL9A1-202ENST00000357250 MLANAQ16655 118 aa9.44□□□□□ -0.9
COL9A1-202ENST00000357250 RSPO1Q2MKA7 263 aaPredicted RBP9.44□□□□□ -0.9
COL9A1-202ENST00000357250 VGLL1Q99990 258 aa9.44□□□□□ -0.9
COL9A1-202ENST00000357250 NCOA6Q14686 2063 aaPredicted RBP9.44□□□□□ -0.9
COL9A1-202ENST00000357250 hDV102S1A0JD36 115 aa9.44□□□□□ -0.9
COL9A1-202ENST00000357250 MMP23AO75900 390 aa9.44□□□□□ -0.9
COL9A1-202ENST00000357250 ERCC8Q13216 396 aa9.44□□□□□ -0.9
COL9A1-202ENST00000357250 IL15RAQ13261 267 aa9.44□□□□□ -0.9
COL9A1-202ENST00000357250 MPV17L2Q567V2 206 aa9.44□□□□□ -0.9
COL9A1-202ENST00000357250 PCNX3Q9H6A9 2034 aa9.43□□□□□ -0.9
COL9A1-202ENST00000357250 PRB4P10163 310 aaPredicted RBP9.43□□□□□ -0.9
COL9A1-202ENST00000357250 NDPQ00604 133 aa9.43□□□□□ -0.9
COL9A1-202ENST00000357250 SRSF2Q01130 221 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms