RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 IGHV3OR16-10A0A075B7F0 116 aa16.58■□□□□ 0.25
LIMS2-201ENST00000324938 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.58■□□□□ 0.25
LIMS2-201ENST00000324938 TRBV7-1A0A0A6YYK4 115 aa16.58■□□□□ 0.25
LIMS2-201ENST00000324938 FAM181BA6NEQ2 426 aa16.58■□□□□ 0.25
LIMS2-201ENST00000324938 BUB3O43684 328 aa16.58■□□□□ 0.25
LIMS2-201ENST00000324938 PRR25Q96S07 402 aa16.58■□□□□ 0.25
LIMS2-201ENST00000324938 TRAV40A0A0B4J280 105 aa16.58■□□□□ 0.24
LIMS2-201ENST00000324938 SH2D1AO60880 128 aa16.58■□□□□ 0.24
LIMS2-201ENST00000324938 RELQ04864 619 aaPredicted RBP16.58■□□□□ 0.24
LIMS2-201ENST00000324938 C19orf54Q5BKX5 351 aa16.58■□□□□ 0.24
LIMS2-201ENST00000324938 PIFOQ8TCI5 191 aa16.58■□□□□ 0.24
LIMS2-201ENST00000324938 CHCHD1Q96BP2 118 aaKnown RBP16.58■□□□□ 0.24
LIMS2-201ENST00000324938 CACNA1BQ00975 2339 aa16.58■□□□□ 0.24
LIMS2-201ENST00000324938 CLPSL1A2RUU4 121 aa16.57■□□□□ 0.24
LIMS2-201ENST00000324938 CRIP2P52943 208 aaPredicted RBP16.57■□□□□ 0.24
LIMS2-201ENST00000324938 MIEN1Q9BRT3 115 aa16.57■□□□□ 0.24
LIMS2-201ENST00000324938 EREGO14944 169 aa16.57■□□□□ 0.24
LIMS2-201ENST00000324938 CFAP46Q8IYW2 2715 aa16.56■□□□□ 0.24
LIMS2-201ENST00000324938 HLA-DMBP28068 263 aa16.56■□□□□ 0.24
LIMS2-201ENST00000324938 CTRLP40313 264 aa16.56■□□□□ 0.24
LIMS2-201ENST00000324938 BRD3OSQ6XYD6 125 aa16.56■□□□□ 0.24
LIMS2-201ENST00000324938 MEGF9Q9H1U4 602 aa16.56■□□□□ 0.24
LIMS2-201ENST00000324938 ZMAT5Q9UDW3 170 aaKnown RBP16.56■□□□□ 0.24
LIMS2-201ENST00000324938 A0A1B0GV90 55 aa16.55■□□□□ 0.24
LIMS2-201ENST00000324938 TMEM189A5PLL7 270 aa16.55■□□□□ 0.24
LIMS2-201ENST00000324938 IGFL4Q6B9Z1 124 aa16.55■□□□□ 0.24
LIMS2-201ENST00000324938 CLEC2AQ6UVW9 174 aa16.55■□□□□ 0.24
LIMS2-201ENST00000324938 ATP6V0BQ99437 205 aa16.55■□□□□ 0.24
LIMS2-201ENST00000324938 VGLL1Q99990 258 aa16.55■□□□□ 0.24
LIMS2-201ENST00000324938 TRAV41A0A0B4J266 112 aa16.55■□□□□ 0.24
LIMS2-201ENST00000324938 DMRTA1Q5VZB9 504 aa16.55■□□□□ 0.24
LIMS2-201ENST00000324938 EBLN2Q6P2I7 272 aa16.55■□□□□ 0.24
LIMS2-201ENST00000324938 C2orf70A6NJV1 201 aa16.54■□□□□ 0.24
LIMS2-201ENST00000324938 M0QZ24 198 aa16.54■□□□□ 0.24
LIMS2-201ENST00000324938 LCN12Q6JVE5 192 aa16.54■□□□□ 0.24
LIMS2-201ENST00000324938 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.54■□□□□ 0.24
LIMS2-201ENST00000324938 Q8TAT8 98 aa16.54■□□□□ 0.24
LIMS2-201ENST00000324938 SNHG12Q9BXW3 62 aa16.54■□□□□ 0.24
LIMS2-201ENST00000324938 SVEP1Q4LDE5 3571 aa16.54■□□□□ 0.24
LIMS2-201ENST00000324938 ATP5J2P56134 94 aa16.54■□□□□ 0.24
LIMS2-201ENST00000324938 ATP5G2Q06055 141 aa16.54■□□□□ 0.24
LIMS2-201ENST00000324938 SLC50A1Q9BRV3 221 aa16.54■□□□□ 0.24
LIMS2-201ENST00000324938 FAM223BA6NKX1 122 aa16.53■□□□□ 0.24
LIMS2-201ENST00000324938 BTF3P20290 206 aaKnown RBP16.53■□□□□ 0.24
LIMS2-201ENST00000324938 RAB4AP20338 218 aa16.53■□□□□ 0.24
LIMS2-201ENST00000324938 ZNF705AQ6ZN79 300 aaPredicted RBP16.53■□□□□ 0.24
LIMS2-201ENST00000324938 ZNF493Q6ZR52 646 aa16.53■□□□□ 0.24
LIMS2-201ENST00000324938 MRPL52Q86TS9 123 aaKnown RBP16.53■□□□□ 0.24
LIMS2-201ENST00000324938 FAM223AQ8IWN6 122 aa16.53■□□□□ 0.24
LIMS2-201ENST00000324938 M0R143 59 aa16.52■□□□□ 0.24
LIMS2-201ENST00000324938 LINC00614P0C842 121 aa16.52■□□□□ 0.24
LIMS2-201ENST00000324938 SPATA45Q537H7 98 aa16.52■□□□□ 0.24
LIMS2-201ENST00000324938 TPPP3Q9BW30 176 aa16.52■□□□□ 0.24
LIMS2-201ENST00000324938 SPTAN1Q13813 2472 aaKnown RBP16.52■□□□□ 0.24
LIMS2-201ENST00000324938 IGHV4-30-2A0A087WSY4 118 aa16.52■□□□□ 0.23
LIMS2-201ENST00000324938 IGHV1-24A0A0C4DH33 117 aa16.52■□□□□ 0.23
LIMS2-201ENST00000324938 IGHV4-38-2P0DP08 117 aa16.52■□□□□ 0.23
LIMS2-201ENST00000324938 PMCHL1Q16048 86 aa16.52■□□□□ 0.23
LIMS2-201ENST00000324938 METTL26Q96S19 204 aa16.52■□□□□ 0.23
LIMS2-201ENST00000324938 DOPEY1Q5JWR5 2465 aa16.51■□□□□ 0.23
LIMS2-201ENST00000324938 BMI1P35226 326 aa16.51■□□□□ 0.23
LIMS2-201ENST00000324938 CYB5R2Q6BCY4 276 aa16.51■□□□□ 0.23
LIMS2-201ENST00000324938 LYZL1Q6UWQ5 148 aa16.51■□□□□ 0.23
LIMS2-201ENST00000324938 LINC00469Q8N7U9 141 aa16.51■□□□□ 0.23
LIMS2-201ENST00000324938 TMSB15BA0A087X1C1 80 aa16.51■□□□□ 0.23
LIMS2-201ENST00000324938 RBAKDNA6NC62 111 aa16.51■□□□□ 0.23
LIMS2-201ENST00000324938 ZNF80P51504 273 aaPredicted RBP16.51■□□□□ 0.23
LIMS2-201ENST00000324938 RPS20P60866 119 aaKnown RBP16.51■□□□□ 0.23
LIMS2-201ENST00000324938 U3KQE9 123 aa16.51■□□□□ 0.23
LIMS2-201ENST00000324938 IGSF10Q6WRI0 2623 aa16.5■□□□□ 0.23
LIMS2-201ENST00000324938 SRSF2Q01130 221 aaKnown RBP16.5■□□□□ 0.23
LIMS2-201ENST00000324938 CLEC5AQ9NY25 188 aa16.5■□□□□ 0.23
LIMS2-201ENST00000324938 IGHV3-66A0A0C4DH42 116 aa16.49■□□□□ 0.23
LIMS2-201ENST00000324938 IGF1P05019 195 aa16.49■□□□□ 0.23
LIMS2-201ENST00000324938 LINC00527Q9UJ94 153 aa16.49■□□□□ 0.23
LIMS2-201ENST00000324938 PRAC2D3DTV9 90 aa16.48■□□□□ 0.23
LIMS2-201ENST00000324938 TRGV3P03979 118 aa16.48■□□□□ 0.23
LIMS2-201ENST00000324938 MSMBP08118 114 aa16.48■□□□□ 0.23
LIMS2-201ENST00000324938 RNF182Q8N6D2 247 aa16.48■□□□□ 0.23
LIMS2-201ENST00000324938 TMEM70Q9BUB7 260 aa16.48■□□□□ 0.23
LIMS2-201ENST00000324938 RNF224P0DH78 156 aa16.48■□□□□ 0.23
LIMS2-201ENST00000324938 IGHV3OR16-13A0A075B7E8 117 aa16.47■□□□□ 0.23
LIMS2-201ENST00000324938 IGHV3-74A0A0B4J1X5 117 aa16.47■□□□□ 0.23
LIMS2-201ENST00000324938 CRXO43186 299 aaPredicted RBP16.47■□□□□ 0.23
LIMS2-201ENST00000324938 ERCC8Q13216 396 aa16.47■□□□□ 0.23
LIMS2-201ENST00000324938 MRPL53Q96EL3 112 aaKnown RBP16.47■□□□□ 0.23
LIMS2-201ENST00000324938 SPOCK3Q9BQ16 436 aa16.47■□□□□ 0.23
LIMS2-201ENST00000324938 TMEM213A2RRL7 107 aa16.46■□□□□ 0.23
LIMS2-201ENST00000324938 A6NDX4 124 aa16.46■□□□□ 0.23
LIMS2-201ENST00000324938 ZNF207O43670 478 aaKnown RBP16.46■□□□□ 0.23
LIMS2-201ENST00000324938 OR5AL1P0C617 328 aa16.46■□□□□ 0.23
LIMS2-201ENST00000324938 IGLC6P0CF74 106 aa16.46■□□□□ 0.23
LIMS2-201ENST00000324938 TRAV8-2A0A0B4J237 113 aa16.46■□□□□ 0.23
LIMS2-201ENST00000324938 LEPROTL1O95214 131 aa16.46■□□□□ 0.23
LIMS2-201ENST00000324938 BRI3O95415 125 aa16.46■□□□□ 0.23
LIMS2-201ENST00000324938 ZNF138P52744 262 aa16.46■□□□□ 0.23
LIMS2-201ENST00000324938 SPATA12Q7Z6I5 190 aa16.46■□□□□ 0.23
LIMS2-201ENST00000324938 ATOH7Q8N100 152 aa16.46■□□□□ 0.23
LIMS2-201ENST00000324938 FER1L6-AS1Q8NA97 138 aa16.46■□□□□ 0.23
LIMS2-201ENST00000324938 COL12A1Q99715 3063 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms