RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Hist1h2bbQ64475 126 aa7.32□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Svs2Q8BS30 375 aa7.32□□□□□ -1.24
Upf3b-201ENSMUST00000076265 MdficQ8BX65 247 aa7.32□□□□□ -1.24
Upf3b-201ENSMUST00000076265 C130073F10RikQ8C4L8 201 aa7.32□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Rps19bp1Q8C6B9 143 aaKnown RBP7.32□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Mef2cQ8CFN5 474 aa7.32□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Hist1h2bkQ8CGP1 126 aaKnown RBP7.32□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Hist1h2bpQ8CGP2 126 aaKnown RBP7.32□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Znf672Q99LH4 468 aa7.32□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Washc3Q9CR27 194 aa7.32□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Fam166aQ9D4K5 319 aa7.32□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Olfr951Q9EQ94 314 aa7.32□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Olfr19Q9JHB2 309 aa7.32□□□□□ -1.24
Upf3b-201ENSMUST00000076265 NmuQ9QXK8 174 aa7.32□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Hils1Q9QYL0 170 aa7.32□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Rnd2Q9QYM5 227 aa7.32□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Ighv9-1A0A0B4J1P3 117 aa7.31□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Zfp820E9Q5G8 549 aa7.31□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Zfp977L7N2E7 438 aa7.31□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Zfand5O88878 213 aa7.31□□□□□ -1.24
Upf3b-201ENSMUST00000076265 P01843 105 aa7.31□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Prm2P07978 107 aa7.31□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Atp4bP50992 294 aa7.31□□□□□ -1.24
Upf3b-201ENSMUST00000076265 TigitP86176 249 aa7.31□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Crip3Q6Q6R3 243 aa7.31□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Rhbdd2Q8VEK2 361 aa7.31□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Olfr1265Q8VEZ3 309 aa7.31□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Olfr133Q8VG94 312 aa7.31□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Olfr558Q8VGZ7 317 aa7.31□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Myo10F8VQB6 2062 aa7.31□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Ighv1-85A0A075B5Y6 117 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 AU041133A0A0J9YVH3 498 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Olfr1314A2AVL6 312 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Gm10130F6ZHM5 101 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Gm26661M0QWV4 156 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 PipP02816 146 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Dusp5Q1HL35 384 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Olfr205Q7TS37 305 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Sox21Q811W0 276 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Hus1bQ8K572 276 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Olfr646Q8VGW2 312 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Olfr559Q8VH14 318 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Wdr13Q91V09 485 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Rpp14Q9CQH8 122 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Q9CWB7 115 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Shisa9Q9CZN4 424 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Sgms2Q9D4B1 365 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Timm23Q9WTQ8 209 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Hcfc1Q61191 2045 aaKnown RBP7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Gm21778A0A087WNP8 232 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Olfr573-ps1A0A1B0GRU2 297 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 A0A286YE02 88 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Gm21800J3QMJ9 180 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Gm21797J3QNW5 180 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Raet1aO08602 253 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Gfra3O35118 397 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Cxcl2P10889 100 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Ntf3P20181 258 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Fkbp2P45878 140 aaKnown RBP7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Zglp1Q1WG82 266 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Sslp1Q3UN54 99 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Ms4a15Q3UPL6 245 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Six2Q62232 296 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Olfr901Q7TRD1 311 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 C1ql2Q8CFR0 287 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Commd5Q8R395 224 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Fbxl12Q9EPX5 326 aa7.3□□□□□ -1.24
Upf3b-201ENSMUST00000076265 2410004P03RikA0A087WQY2 205 aa7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Foxi3E0CZH3 425 aa7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 1810032O08RikE9PZV8 113 aa7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Vmn1r80L7N1Z3 308 aa7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Thy1P01831 162 aa7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Pax1P09084 446 aa7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Rpl7P14148 270 aaKnown RBP7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Klk1b26P36369 261 aa7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Crisp1Q03401 244 aa7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Plpp1Q61469 283 aa7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Dppa1Q810Y7 116 aa7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Nudt15Q8BG93 170 aa7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Slc35a3Q8R1T4 326 aa7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Gpx4Q91XR9 253 aa7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 PinlypQ9CQD7 212 aa7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 MmdQ9CQY7 238 aa7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 VsirQ9D659 308 aa7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Slc25a27Q9D6D0 322 aa7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Srxn1Q9D975 136 aa7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Olfr894Q9EQB2 313 aa7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 MesdQ9ERE7 224 aa7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Plekhb2Q9QZC7 221 aa7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Cacna1gQ5SUF7 2381 aa7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 SpegQ62407 3262 aa7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Ssxb6A2BI74 170 aa7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Obox5G3X9P6 291 aa7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 9130409I23RikQ3TS87 320 aa7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Srsf6Q3TWW8 339 aaKnown RBP7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Commd9Q8K2Q0 198 aa7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Lmx1aQ9JKU8 382 aa7.29□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Trav16d-dv11A0A075B617 117 aa7.28□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Iglc1A0A0G2JE99 106 aa7.28□□□□□ -1.24
Upf3b-201ENSMUST00000076265 Gm45261A0A1B0GSP6 197 aa7.28□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 45.8 ms