RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 MED14OSP0DP75 135 aa4.5□□□□□ -1.69
COL4A3BP-207ENST00000604926 HERVK_113P61574 105 aa4.5□□□□□ -1.69
COL4A3BP-207ENST00000604926 NSUN5P1Q3KNT7 163 aa4.5□□□□□ -1.69
COL4A3BP-207ENST00000604926 SCGB1D4Q6XE38 83 aa4.5□□□□□ -1.69
COL4A3BP-207ENST00000604926 RITA1Q96K30 269 aa4.5□□□□□ -1.69
COL4A3BP-207ENST00000604926 NXT2Q9NPJ8 142 aaKnown RBP4.5□□□□□ -1.69
COL4A3BP-207ENST00000604926 MUC22E2RYF6 1773 aaPredicted RBP4.49□□□□□ -1.69
COL4A3BP-207ENST00000604926 RANBP2P49792 3224 aaKnown RBP4.49□□□□□ -1.69
COL4A3BP-207ENST00000604926 A8MUN3 132 aa4.49□□□□□ -1.69
COL4A3BP-207ENST00000604926 CPSF4O95639 269 aaKnown RBP4.49□□□□□ -1.69
COL4A3BP-207ENST00000604926 QRFPP83859 136 aa4.49□□□□□ -1.69
COL4A3BP-207ENST00000604926 Q75L30 129 aa4.49□□□□□ -1.69
COL4A3BP-207ENST00000604926 PRNTQ86SH4 94 aa4.49□□□□□ -1.69
COL4A3BP-207ENST00000604926 CLDND2Q8NHS1 167 aa4.49□□□□□ -1.69
COL4A3BP-207ENST00000604926 TIMM17AQ99595 171 aa4.49□□□□□ -1.69
COL4A3BP-207ENST00000604926 IMUPQ9GZP8 106 aa4.49□□□□□ -1.69
COL4A3BP-207ENST00000604926 VCANP13611 3396 aa4.49□□□□□ -1.69
COL4A3BP-207ENST00000604926 C2orf70A6NJV1 201 aa4.49□□□□□ -1.69
COL4A3BP-207ENST00000604926 SNURFLB1AK76 121 aa4.49□□□□□ -1.69
COL4A3BP-207ENST00000604926 C2CD4DB7Z1M9 353 aa4.49□□□□□ -1.69
COL4A3BP-207ENST00000604926 NDUFC2-KCTD14E9PQ53 114 aa4.49□□□□□ -1.69
COL4A3BP-207ENST00000604926 CA6P23280 308 aa4.49□□□□□ -1.69
COL4A3BP-207ENST00000604926 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.49□□□□□ -1.69
COL4A3BP-207ENST00000604926 PRSS33Q8NF86 280 aa4.49□□□□□ -1.69
COL4A3BP-207ENST00000604926 FGF13Q92913 245 aa4.49□□□□□ -1.69
COL4A3BP-207ENST00000604926 PLXNB3Q9ULL4 1909 aa4.49□□□□□ -1.69
COL4A3BP-207ENST00000604926 KIAA2026Q5HYC2 2103 aa4.49□□□□□ -1.69
COL4A3BP-207ENST00000604926 TRGV5A0A0B4J1U4 118 aa4.48□□□□□ -1.69
COL4A3BP-207ENST00000604926 HLA-DQA1P01909 254 aa4.48□□□□□ -1.69
COL4A3BP-207ENST00000604926 EFNA4P52798 201 aa4.48□□□□□ -1.69
COL4A3BP-207ENST00000604926 CFHR3Q02985 330 aa4.48□□□□□ -1.69
COL4A3BP-207ENST00000604926 MKXQ8IYA7 352 aa4.48□□□□□ -1.69
COL4A3BP-207ENST00000604926 DEFB127Q9H1M4 99 aa4.48□□□□□ -1.69
COL4A3BP-207ENST00000604926 FAM60AQ9NP50 221 aa4.48□□□□□ -1.69
COL4A3BP-207ENST00000604926 A0A0G2JNJ9 132 aa4.48□□□□□ -1.69
COL4A3BP-207ENST00000604926 EPOPA6NHQ4 379 aa4.48□□□□□ -1.69
COL4A3BP-207ENST00000604926 M0R381 172 aa4.48□□□□□ -1.69
COL4A3BP-207ENST00000604926 ZNF73O43830 326 aaPredicted RBP4.48□□□□□ -1.69
COL4A3BP-207ENST00000604926 GP1BBP13224 206 aa4.48□□□□□ -1.69
COL4A3BP-207ENST00000604926 ZNF823P16415 610 aa4.48□□□□□ -1.69
COL4A3BP-207ENST00000604926 ZNF791Q3KP31 576 aaPredicted RBP4.48□□□□□ -1.69
COL4A3BP-207ENST00000604926 FRG2Q64ET8 278 aa4.48□□□□□ -1.69
COL4A3BP-207ENST00000604926 IL1F10Q8WWZ1 152 aa4.48□□□□□ -1.69
COL4A3BP-207ENST00000604926 C19orf73Q9NVV2 129 aa4.48□□□□□ -1.69
COL4A3BP-207ENST00000604926 ABRACLQ9P1F3 81 aa4.48□□□□□ -1.69
COL4A3BP-207ENST00000604926 Q9UFV3 132 aa4.48□□□□□ -1.69
COL4A3BP-207ENST00000604926 BMPR1BO00238 502 aa4.48□□□□□ -1.69
COL4A3BP-207ENST00000604926 NDUFS5O43920 106 aa4.48□□□□□ -1.69
COL4A3BP-207ENST00000604926 PLA2G1BP04054 148 aaKnown RBP4.48□□□□□ -1.69
COL4A3BP-207ENST00000604926 RPL23P62829 140 aaKnown RBP4.48□□□□□ -1.69
COL4A3BP-207ENST00000604926 CLEC19AQ6UXS0 136 aa4.48□□□□□ -1.69
COL4A3BP-207ENST00000604926 SMRP1Q8NCR6 262 aa4.48□□□□□ -1.69
COL4A3BP-207ENST00000604926 GPHA2Q96T91 129 aa4.48□□□□□ -1.69
COL4A3BP-207ENST00000604926 KLF16Q9BXK1 252 aaPredicted RBP4.48□□□□□ -1.69
COL4A3BP-207ENST00000604926 CMC2Q9NRP2 79 aa4.48□□□□□ -1.69
COL4A3BP-207ENST00000604926 SLC25A16P16260 332 aa4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 FCGR2CP31995 323 aa4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 ZNF80P51504 273 aaPredicted RBP4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 CCL23P55773 120 aa4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 CIRBPQ14011 172 aaKnown RBP4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 PIK3CD-AS1Q5SR53 167 aa4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 TMSB15BA0A087X1C1 80 aa4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 TRAV17A0A0B4J275 112 aa4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 PGPA6NDG6 321 aa4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 CST7O76096 145 aa4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 APCSP02743 223 aa4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 ZNF20P17024 532 aa4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 CXCL5P42830 114 aa4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 ZNF136P52737 540 aa4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 CYP2G1PQ6ZSU1 146 aa4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 SBSPONQ8IVN8 264 aa4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 LINC00337Q8N6G1 96 aa4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 CD177Q8N6Q3 437 aa4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 ZNF563Q8TA94 476 aa4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 UPK3BQ9BT76 320 aa4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 SRXN1Q9BYN0 137 aa4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 MCM3APO60318 1980 aa4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 TMEM256-PLSCR3K7ERE1 68 aa4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 SCGB1C2P0DMR2 95 aa4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 GLI4P10075 376 aa4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 COL8A2P25067 703 aa4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 LMO2P25791 158 aa4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 DPTQ07507 201 aa4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 SP5Q6BEB4 398 aaPredicted RBP4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 TMEM230Q96A57 120 aa4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 ZNF286AQ9HBT8 521 aa4.47□□□□□ -1.69
COL4A3BP-207ENST00000604926 SZT2Q5T011 3432 aa4.46□□□□□ -1.69
COL4A3BP-207ENST00000604926 DNAH12Q6ZR08 3092 aa4.46□□□□□ -1.7
COL4A3BP-207ENST00000604926 TRBV5-7A0A0A0MS05 114 aa4.46□□□□□ -1.7
COL4A3BP-207ENST00000604926 IGKV6D-21A0A0A0MT36 114 aa4.46□□□□□ -1.7
COL4A3BP-207ENST00000604926 TRBV5-5A0A0J9YX44 114 aa4.46□□□□□ -1.7
COL4A3BP-207ENST00000604926 LST1O00453 97 aa4.46□□□□□ -1.7
COL4A3BP-207ENST00000604926 UPK2O00526 184 aa4.46□□□□□ -1.7
COL4A3BP-207ENST00000604926 ZNF56Q15929 161 aa4.46□□□□□ -1.7
COL4A3BP-207ENST00000604926 C2orf50Q96LR7 162 aa4.46□□□□□ -1.7
COL4A3BP-207ENST00000604926 OR2A5Q96R48 311 aa4.46□□□□□ -1.7
COL4A3BP-207ENST00000604926 SMIM7Q9BQ49 75 aa4.46□□□□□ -1.7
COL4A3BP-207ENST00000604926 Q9H3A6 140 aa4.46□□□□□ -1.7
COL4A3BP-207ENST00000604926 LINC00474Q9P2X8 69 aa4.46□□□□□ -1.7
COL4A3BP-207ENST00000604926 EPDR1Q9UM22 224 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms