RNA–Protein interactions for RNA: ENST00000525293.5

CD44-216, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-216ENST00000525293 TRBV24-1A0A075B6N3 115 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 IGHV1-69DA0A0B4J2H0 117 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 TRBV27A0A0K0K1C4 114 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 IGLL5B9A064 214 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 K7N7A8 449 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 UBE2L6O14933 153 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 HCRTO43612 131 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 CST7O76096 145 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 PROSCO94903 275 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 C1QAP02745 245 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 LGALS3P17931 250 aaKnown RBP1.62□□□□□ -2.15
CD44-216ENST00000525293 AQP1P29972 269 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 HBBP68871 147 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 ZNF816Q0VGE8 651 aaPredicted RBP1.62□□□□□ -2.15
CD44-216ENST00000525293 INSL4Q14641 139 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 ZNF101Q8IZC7 436 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 Q8N2B8 174 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 ZNF525Q8N782 197 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 OR8B3Q8NGG8 313 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 CMTM2Q8TAZ6 248 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 MRPL30Q8TCC3 161 aaKnown RBP1.62□□□□□ -2.15
CD44-216ENST00000525293 PPDPFLQ8WWR9 84 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 H1FXQ92522 213 aaKnown RBP1.62□□□□□ -2.15
CD44-216ENST00000525293 TOMM6Q96B49 74 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 VSIG2Q96IQ7 327 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 HDHD3Q9BSH5 251 aaPredicted RBP1.62□□□□□ -2.15
CD44-216ENST00000525293 SCRT1Q9BWW7 348 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 POLR2J2Q9GZM3 115 aaKnown RBP1.62□□□□□ -2.15
CD44-216ENST00000525293 PLEKHF2Q9H8W4 249 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 SND1-IT1Q9HBX3 110 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 AIG1Q9NVV5 245 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 EPDR1Q9UM22 224 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 GLI2P10070 1586 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 NRKQ7Z2Y5 1582 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 DIP2CQ9Y2E4 1556 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 LAMC3Q9Y6N6 1575 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 CHD3Q12873 2000 aaKnown RBP1.62□□□□□ -2.15
CD44-216ENST00000525293 ABCA9Q8IUA7 1624 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 LTN1O94822 1766 aa1.62□□□□□ -2.15
CD44-216ENST00000525293 RBBP6Q7Z6E9 1792 aaKnown RBP1.62□□□□□ -2.15
CD44-216ENST00000525293 TNRC6AQ8NDV7 1962 aaKnown RBP1.61□□□□□ -2.15
CD44-216ENST00000525293 ITGB4P16144 1822 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 PARP14Q460N5 1801 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 NUP210LQ5VU65 1888 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 ANKARQ7Z5J8 1434 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 TRAV14DV4A0A0A6YYC5 116 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 IGKV1-9A0A0C4DH69 117 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 MDFIC2A0A1B0GVS7 189 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 KANTRA0A1W2PQU2 76 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 FAM24AA6NFZ4 105 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 NDUFC2-KCTD14E9PQ53 114 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 UPK2O00526 184 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 PSPHP1O15172 72 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 SLC25A14O95258 325 aaPredicted RBP1.61□□□□□ -2.15
CD44-216ENST00000525293 IGLV2-8P01709 118 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 IGKCP01834 107 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 GYPAP02724 150 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 GYPBP06028 91 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 IGLL1P15814 213 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 COL8A2P25067 703 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 ASIPP42127 132 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 CXCL5P42830 114 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 SSR2P43308 183 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 KRTDAPP60985 99 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 RPL23P62829 140 aaKnown RBP1.61□□□□□ -2.15
CD44-216ENST00000525293 GNB2P62879 340 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 KIAA0087Q14695 138 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 KISS1Q15726 138 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 RSPO1Q2MKA7 263 aaPredicted RBP1.61□□□□□ -2.15
CD44-216ENST00000525293 CLLU1OSQ5K130 101 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 SBSPONQ8IVN8 264 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 AMN1Q8IY45 258 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 C15orf53Q8NAA6 179 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 FAM57AQ8TBR7 257 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 TSKUQ8WUA8 353 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 FGF13Q92913 245 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 RAB37Q96AX2 223 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 ABHD14BQ96IU4 210 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 C2orf50Q96LR7 162 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 OR8B2Q96RD0 313 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 UPK3BQ9BT76 320 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 SPANXDQ9BXN6 97 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 EIF5A2Q9GZV4 153 aaKnown RBP1.61□□□□□ -2.15
CD44-216ENST00000525293 Q9H3A6 140 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 ZNF702PQ9H963 129 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 FAM60AQ9NP50 221 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 ZNF492Q9P255 531 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 HIGD1BQ9P298 99 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 LINC00474Q9P2X8 69 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 LAMC1P11047 1609 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 LRRC9Q6ZRR7 1453 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 TEP1Q99973 2627 aaKnown RBP1.61□□□□□ -2.15
CD44-216ENST00000525293 ITSN2Q9NZM3 1697 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 MAPKBP1O60336 1514 aa1.61□□□□□ -2.15
CD44-216ENST00000525293 KNDC1Q76NI1 1749 aa1.6□□□□□ -2.15
CD44-216ENST00000525293 VWA8A3KMH1 1905 aa1.6□□□□□ -2.15
CD44-216ENST00000525293 GLI3P10071 1580 aa1.6□□□□□ -2.15
CD44-216ENST00000525293 DENND4CQ5VZ89 1909 aa1.6□□□□□ -2.15
CD44-216ENST00000525293 MYH4Q9Y623 1939 aa1.6□□□□□ -2.15
CD44-216ENST00000525293 SETBP1Q9Y6X0 1596 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms