RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 MLXQ9UH92 298 aa10.73□□□□□ -0.69
LAMA4-208ENST00000431543 SMAD5-AS1Q9Y6J3 95 aa10.73□□□□□ -0.69
LAMA4-208ENST00000431543 TCF24Q7RTU0 167 aa10.72□□□□□ -0.69
LAMA4-208ENST00000431543 SLC25A2Q9BXI2 301 aa10.72□□□□□ -0.69
LAMA4-208ENST00000431543 TRAV1-1A0A0B4J248 108 aa10.71□□□□□ -0.69
LAMA4-208ENST00000431543 HIST1H1EP10412 219 aaKnown RBP10.71□□□□□ -0.69
LAMA4-208ENST00000431543 PSMB3P49720 205 aa10.71□□□□□ -0.69
LAMA4-208ENST00000431543 UBE2L3P68036 154 aaKnown RBP10.71□□□□□ -0.69
LAMA4-208ENST00000431543 IFITM2Q01629 132 aa10.71□□□□□ -0.69
LAMA4-208ENST00000431543 ZNF726P1Q15940 193 aa10.71□□□□□ -0.69
LAMA4-208ENST00000431543 MORN5Q5VZ52 161 aa10.71□□□□□ -0.69
LAMA4-208ENST00000431543 LCN12Q6JVE5 192 aa10.71□□□□□ -0.69
LAMA4-208ENST00000431543 OR2K2Q8NGT1 345 aa10.71□□□□□ -0.69
LAMA4-208ENST00000431543 TRAV25A0A0B4J276 109 aa10.7□□□□□ -0.7
LAMA4-208ENST00000431543 DNASE2O00115 360 aaPredicted RBP10.7□□□□□ -0.7
LAMA4-208ENST00000431543 IFNA1P01562 189 aa10.7□□□□□ -0.7
LAMA4-208ENST00000431543 NBEAP1P0C6P0 100 aa10.7□□□□□ -0.7
LAMA4-208ENST00000431543 FRMD6-AS1P0C7T7 363 aa10.7□□□□□ -0.7
LAMA4-208ENST00000431543 ARL14EPLP0DKL9 152 aa10.7□□□□□ -0.7
LAMA4-208ENST00000431543 GCHFRP30047 84 aa10.7□□□□□ -0.7
LAMA4-208ENST00000431543 FGF8P55075 233 aaPredicted RBP10.7□□□□□ -0.7
LAMA4-208ENST00000431543 SBSPONQ8IVN8 264 aa10.7□□□□□ -0.7
LAMA4-208ENST00000431543 TMEM61Q8N0U2 210 aa10.7□□□□□ -0.7
LAMA4-208ENST00000431543 GLMPQ8WWB7 406 aa10.7□□□□□ -0.7
LAMA4-208ENST00000431543 FAM167A-AS1Q96KT0 104 aa10.7□□□□□ -0.7
LAMA4-208ENST00000431543 HRH4Q9H3N8 390 aa10.7□□□□□ -0.7
LAMA4-208ENST00000431543 A0A1B0GV50 99 aa10.69□□□□□ -0.7
LAMA4-208ENST00000431543 RGS13O14921 159 aa10.69□□□□□ -0.7
LAMA4-208ENST00000431543 CD7P09564 240 aa10.69□□□□□ -0.7
LAMA4-208ENST00000431543 IGHV4-30-4P0DP06 118 aa10.69□□□□□ -0.7
LAMA4-208ENST00000431543 PSG9Q00887 426 aa10.69□□□□□ -0.7
LAMA4-208ENST00000431543 GUCA2BQ16661 112 aa10.69□□□□□ -0.7
LAMA4-208ENST00000431543 BLNKQ8WV28 456 aa10.69□□□□□ -0.7
LAMA4-208ENST00000431543 EIF3GO75821 320 aaKnown RBP eCLIP10.68□□□□□ -0.7
LAMA4-208ENST00000431543 OR10J4P0C629 311 aa10.68□□□□□ -0.7
LAMA4-208ENST00000431543 PYYP10082 97 aa10.68□□□□□ -0.7
LAMA4-208ENST00000431543 TAGLN2P37802 199 aaKnown RBP10.68□□□□□ -0.7
LAMA4-208ENST00000431543 ID1P41134 155 aa10.68□□□□□ -0.7
LAMA4-208ENST00000431543 PDE6HQ13956 83 aa10.68□□□□□ -0.7
LAMA4-208ENST00000431543 CLLU1Q5K131 121 aa10.68□□□□□ -0.7
LAMA4-208ENST00000431543 SSX7Q7RTT5 188 aa10.68□□□□□ -0.7
LAMA4-208ENST00000431543 NKX6-2Q9C056 277 aaPredicted RBP10.68□□□□□ -0.7
LAMA4-208ENST00000431543 AAMDCQ9H7C9 122 aa10.68□□□□□ -0.7
LAMA4-208ENST00000431543 NRN1Q9NPD7 142 aa10.68□□□□□ -0.7
LAMA4-208ENST00000431543 C19orf73Q9NVV2 129 aa10.68□□□□□ -0.7
LAMA4-208ENST00000431543 CLEC5AQ9NY25 188 aa10.68□□□□□ -0.7
LAMA4-208ENST00000431543 IGKV3-7A0A075B6H7 116 aa10.67□□□□□ -0.7
LAMA4-208ENST00000431543 A0A087X0K7 114 aa10.67□□□□□ -0.7
LAMA4-208ENST00000431543 ZNF253O75346 499 aa10.67□□□□□ -0.7
LAMA4-208ENST00000431543 NMBP08949 121 aa10.67□□□□□ -0.7
LAMA4-208ENST00000431543 IGLC2P0DOY2 106 aa10.67□□□□□ -0.7
LAMA4-208ENST00000431543 CD81P60033 236 aa10.67□□□□□ -0.7
LAMA4-208ENST00000431543 FAM90A2PQ658T7 463 aa10.67□□□□□ -0.7
LAMA4-208ENST00000431543 LYPD1Q8N2G4 141 aa10.67□□□□□ -0.7
LAMA4-208ENST00000431543 FXYD5Q96DB9 178 aa10.67□□□□□ -0.7
LAMA4-208ENST00000431543 C16orf92Q96LL3 132 aa10.67□□□□□ -0.7
LAMA4-208ENST00000431543 SLC50A1Q9BRV3 221 aa10.67□□□□□ -0.7
LAMA4-208ENST00000431543 WFDC10AQ9H1F0 79 aa10.67□□□□□ -0.7
LAMA4-208ENST00000431543 MANBALQ9NQG1 85 aa10.67□□□□□ -0.7
LAMA4-208ENST00000431543 TRBV19A0A075B6N1 114 aa10.66□□□□□ -0.7
LAMA4-208ENST00000431543 TRAV2A0A0B4J234 112 aa10.66□□□□□ -0.7
LAMA4-208ENST00000431543 OR4C46A6NHA9 309 aa10.66□□□□□ -0.7
LAMA4-208ENST00000431543 TSPAN4O14817 238 aa10.66□□□□□ -0.7
LAMA4-208ENST00000431543 MRPS12O15235 138 aaKnown RBP10.66□□□□□ -0.7
LAMA4-208ENST00000431543 CMC4P56277 68 aaPredicted RBP10.66□□□□□ -0.7
LAMA4-208ENST00000431543 SNRPD3P62318 126 aaKnown RBP10.66□□□□□ -0.7
LAMA4-208ENST00000431543 PMS2P11Q13670 270 aa10.66□□□□□ -0.7
LAMA4-208ENST00000431543 GTSCR1Q86UQ5 136 aa10.66□□□□□ -0.7
LAMA4-208ENST00000431543 GBGT1Q8N5D6 347 aa10.66□□□□□ -0.7
LAMA4-208ENST00000431543 LYPD6BQ8NI32 183 aa10.66□□□□□ -0.7
LAMA4-208ENST00000431543 SUN5Q8TC36 379 aa10.66□□□□□ -0.7
LAMA4-208ENST00000431543 ZNF503Q96F45 646 aa10.66□□□□□ -0.7
LAMA4-208ENST00000431543 SPAG8Q99932 426 aaPredicted RBP10.66□□□□□ -0.7
LAMA4-208ENST00000431543 MS4A6AQ9H2W1 248 aa10.66□□□□□ -0.7
LAMA4-208ENST00000431543 ZNF586Q9NXT0 402 aa10.66□□□□□ -0.7
LAMA4-208ENST00000431543 GNG13Q9P2W3 67 aa10.66□□□□□ -0.7
LAMA4-208ENST00000431543 H3BQ15 152 aa10.65□□□□□ -0.7
LAMA4-208ENST00000431543 NHLRC4P0CG21 123 aaPredicted RBP10.65□□□□□ -0.7
LAMA4-208ENST00000431543 TFPI2P48307 235 aa10.65□□□□□ -0.7
LAMA4-208ENST00000431543 RANP62826 216 aaKnown RBP10.65□□□□□ -0.7
LAMA4-208ENST00000431543 CST9LP1Q5W188 147 aa10.65□□□□□ -0.7
LAMA4-208ENST00000431543 WFDC3Q8IUB2 231 aa10.65□□□□□ -0.7
LAMA4-208ENST00000431543 DEFB125Q8N687 156 aa10.65□□□□□ -0.7
LAMA4-208ENST00000431543 KRTAP3-3Q9BYR6 98 aa10.65□□□□□ -0.7
LAMA4-208ENST00000431543 KRTAP3-2Q9BYR7 98 aa10.65□□□□□ -0.7
LAMA4-208ENST00000431543 TMPRSS5Q9H3S3 457 aa10.65□□□□□ -0.7
LAMA4-208ENST00000431543 ARL2-SNX15V9GYD0 113 aa10.65□□□□□ -0.7
LAMA4-208ENST00000431543 NBEAL2Q6ZNJ1 2754 aa10.64□□□□□ -0.71
LAMA4-208ENST00000431543 A0A1W2PRE2 83 aa10.64□□□□□ -0.71
LAMA4-208ENST00000431543 A8MZ25 164 aa10.64□□□□□ -0.71
LAMA4-208ENST00000431543 ISLRO14498 428 aa10.64□□□□□ -0.71
LAMA4-208ENST00000431543 SNRPCP09234 159 aaKnown RBP10.64□□□□□ -0.71
LAMA4-208ENST00000431543 CSN1S1P47710 185 aa10.64□□□□□ -0.71
LAMA4-208ENST00000431543 CCL20P78556 96 aa10.64□□□□□ -0.71
LAMA4-208ENST00000431543 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.64□□□□□ -0.71
LAMA4-208ENST00000431543 CMTM2Q8TAZ6 248 aa10.64□□□□□ -0.71
LAMA4-208ENST00000431543 PCNPQ8WW12 178 aaKnown RBP10.64□□□□□ -0.71
LAMA4-208ENST00000431543 TXNDC17Q9BRA2 123 aa10.64□□□□□ -0.71
LAMA4-208ENST00000431543 TUBA4BQ9H853 241 aa10.64□□□□□ -0.71
LAMA4-208ENST00000431543 OTORQ9NRC9 128 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms