RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 PSG8Q9UQ74 426 aa10.88□□□□□ -0.67
APOBEC3D-202ENST00000427494 USP9XQ93008 2570 aaPredicted RBP10.88□□□□□ -0.67
APOBEC3D-202ENST00000427494 COL12A1Q99715 3063 aa10.87□□□□□ -0.67
APOBEC3D-202ENST00000427494 A8MWL6 223 aa10.87□□□□□ -0.67
APOBEC3D-202ENST00000427494 B4DSR2 109 aa10.87□□□□□ -0.67
APOBEC3D-202ENST00000427494 APCSP02743 223 aa10.87□□□□□ -0.67
APOBEC3D-202ENST00000427494 JOSD1Q15040 202 aaPredicted RBP10.87□□□□□ -0.67
APOBEC3D-202ENST00000427494 BAGE3Q86Y29 109 aa10.87□□□□□ -0.67
APOBEC3D-202ENST00000427494 ASCL2Q99929 193 aa10.87□□□□□ -0.67
APOBEC3D-202ENST00000427494 ZFAND3Q9H8U3 227 aa10.87□□□□□ -0.67
APOBEC3D-202ENST00000427494 LINC00527Q9UJ94 153 aa10.87□□□□□ -0.67
APOBEC3D-202ENST00000427494 TRBV7-1A0A0A6YYK4 115 aa10.86□□□□□ -0.67
APOBEC3D-202ENST00000427494 A1L4Q6 167 aa10.86□□□□□ -0.67
APOBEC3D-202ENST00000427494 H3BUX3 64 aa10.86□□□□□ -0.67
APOBEC3D-202ENST00000427494 SERF1AO75920 110 aa10.86□□□□□ -0.67
APOBEC3D-202ENST00000427494 COL8A1P27658 744 aa10.86□□□□□ -0.67
APOBEC3D-202ENST00000427494 CSN1S1P47710 185 aa10.86□□□□□ -0.67
APOBEC3D-202ENST00000427494 Q0VG73 95 aa10.86□□□□□ -0.67
APOBEC3D-202ENST00000427494 NOL4LQ96MY1 436 aaPredicted RBP10.86□□□□□ -0.67
APOBEC3D-202ENST00000427494 ZFP30Q9Y2G7 519 aa10.86□□□□□ -0.67
APOBEC3D-202ENST00000427494 LINC00587B1AMM8 73 aa10.86□□□□□ -0.67
APOBEC3D-202ENST00000427494 F2Z2F3 143 aa10.86□□□□□ -0.67
APOBEC3D-202ENST00000427494 PAX1P15863 534 aa10.86□□□□□ -0.67
APOBEC3D-202ENST00000427494 SLC25A16P16260 332 aa10.86□□□□□ -0.67
APOBEC3D-202ENST00000427494 LINC00310P59036 64 aa10.86□□□□□ -0.67
APOBEC3D-202ENST00000427494 ATP5G2Q06055 141 aa10.86□□□□□ -0.67
APOBEC3D-202ENST00000427494 C19orf54Q5BKX5 351 aa10.86□□□□□ -0.67
APOBEC3D-202ENST00000427494 OR5R1Q8NH85 324 aa10.86□□□□□ -0.67
APOBEC3D-202ENST00000427494 ZC2HC1AQ96GY0 325 aa10.86□□□□□ -0.67
APOBEC3D-202ENST00000427494 SMAD5-AS1Q9Y6J3 95 aa10.86□□□□□ -0.67
APOBEC3D-202ENST00000427494 NPIPB6E9PJ23 425 aa10.85□□□□□ -0.67
APOBEC3D-202ENST00000427494 GZMBP10144 247 aa10.85□□□□□ -0.67
APOBEC3D-202ENST00000427494 SRIP30626 198 aa10.85□□□□□ -0.67
APOBEC3D-202ENST00000427494 CRIP2P52943 208 aaPredicted RBP10.85□□□□□ -0.67
APOBEC3D-202ENST00000427494 SRSF1Q07955 248 aaKnown RBP eCLIP10.85□□□□□ -0.67
APOBEC3D-202ENST00000427494 SLAQ13239 276 aa10.85□□□□□ -0.67
APOBEC3D-202ENST00000427494 GDF5OSQ5U4N7 250 aa10.85□□□□□ -0.67
APOBEC3D-202ENST00000427494 ATP5L2Q7Z4Y8 100 aa10.85□□□□□ -0.67
APOBEC3D-202ENST00000427494 OR4B1Q8NGF8 309 aa10.85□□□□□ -0.67
APOBEC3D-202ENST00000427494 GTSF1Q8WW33 167 aa10.85□□□□□ -0.67
APOBEC3D-202ENST00000427494 TRAV20A0A0B4J274 112 aa10.85□□□□□ -0.67
APOBEC3D-202ENST00000427494 A6NDX4 124 aa10.85□□□□□ -0.67
APOBEC3D-202ENST00000427494 CAMPP49913 170 aa10.85□□□□□ -0.67
APOBEC3D-202ENST00000427494 TPPP2P59282 170 aa10.85□□□□□ -0.67
APOBEC3D-202ENST00000427494 OR2D3Q8NGH3 330 aa10.85□□□□□ -0.67
APOBEC3D-202ENST00000427494 PGLYRP4Q96LB8 373 aa10.85□□□□□ -0.67
APOBEC3D-202ENST00000427494 GFRA4Q9GZZ7 299 aa10.85□□□□□ -0.67
APOBEC3D-202ENST00000427494 PRDM13Q9H4Q3 707 aa10.85□□□□□ -0.67
APOBEC3D-202ENST00000427494 A0A1B0GXF2 115 aa10.84□□□□□ -0.67
APOBEC3D-202ENST00000427494 FAM223BA6NKX1 122 aa10.84□□□□□ -0.67
APOBEC3D-202ENST00000427494 AVPP01185 164 aa10.84□□□□□ -0.67
APOBEC3D-202ENST00000427494 TRGV3P03979 118 aa10.84□□□□□ -0.67
APOBEC3D-202ENST00000427494 ESDP10768 282 aa10.84□□□□□ -0.67
APOBEC3D-202ENST00000427494 OR10J3Q5JRS4 329 aa10.84□□□□□ -0.67
APOBEC3D-202ENST00000427494 FAM223AQ8IWN6 122 aa10.84□□□□□ -0.67
APOBEC3D-202ENST00000427494 SVEP1Q4LDE5 3571 aa10.84□□□□□ -0.67
APOBEC3D-202ENST00000427494 IGKV2-40A0A087WW87 121 aaPredicted RBP10.83□□□□□ -0.68
APOBEC3D-202ENST00000427494 SERTM2A0A1B0GWG4 89 aa10.83□□□□□ -0.68
APOBEC3D-202ENST00000427494 IGKV2D-40P01614 121 aaPredicted RBP10.83□□□□□ -0.68
APOBEC3D-202ENST00000427494 RAB9AP51151 201 aa10.83□□□□□ -0.68
APOBEC3D-202ENST00000427494 HBBP68871 147 aa10.83□□□□□ -0.68
APOBEC3D-202ENST00000427494 RELQ04864 619 aaPredicted RBP10.83□□□□□ -0.68
APOBEC3D-202ENST00000427494 RBPMS2Q6ZRY4 209 aaKnown RBP10.83□□□□□ -0.68
APOBEC3D-202ENST00000427494 C8orf49Q96NF6 230 aa10.83□□□□□ -0.68
APOBEC3D-202ENST00000427494 SSBP4Q9BWG4 385 aaPredicted RBP10.83□□□□□ -0.68
APOBEC3D-202ENST00000427494 UTP20O75691 2785 aaKnown RBP10.83□□□□□ -0.68
APOBEC3D-202ENST00000427494 IGHV3-66A0A0C4DH42 116 aa10.83□□□□□ -0.68
APOBEC3D-202ENST00000427494 CLPSL1A2RUU4 121 aa10.83□□□□□ -0.68
APOBEC3D-202ENST00000427494 ZNF785A8K8V0 405 aa10.83□□□□□ -0.68
APOBEC3D-202ENST00000427494 CHEK1O14757 476 aa10.83□□□□□ -0.68
APOBEC3D-202ENST00000427494 ZNF253O75346 499 aa10.83□□□□□ -0.68
APOBEC3D-202ENST00000427494 GATA3P23771 443 aa10.83□□□□□ -0.68
APOBEC3D-202ENST00000427494 PAFAH1B2P68402 229 aa10.83□□□□□ -0.68
APOBEC3D-202ENST00000427494 C16orf54Q6UWD8 224 aa10.83□□□□□ -0.68
APOBEC3D-202ENST00000427494 VPS13CQ709C8 3753 aa10.82□□□□□ -0.68
APOBEC3D-202ENST00000427494 FAM231BA6NCW3 169 aa10.82□□□□□ -0.68
APOBEC3D-202ENST00000427494 BUB3O43684 328 aa10.82□□□□□ -0.68
APOBEC3D-202ENST00000427494 IGF1P05019 195 aa10.82□□□□□ -0.68
APOBEC3D-202ENST00000427494 HLA-DMBP28068 263 aa10.82□□□□□ -0.68
APOBEC3D-202ENST00000427494 IGFL4Q6B9Z1 124 aa10.82□□□□□ -0.68
APOBEC3D-202ENST00000427494 LINC01356Q8N9X3 169 aa10.82□□□□□ -0.68
APOBEC3D-202ENST00000427494 SAMD10Q9BYL1 202 aa10.82□□□□□ -0.68
APOBEC3D-202ENST00000427494 A0A087X0K7 114 aa10.81□□□□□ -0.68
APOBEC3D-202ENST00000427494 M0QZK8 103 aa10.81□□□□□ -0.68
APOBEC3D-202ENST00000427494 ZNF207O43670 478 aaKnown RBP10.81□□□□□ -0.68
APOBEC3D-202ENST00000427494 IGHG2P01859 326 aa10.81□□□□□ -0.68
APOBEC3D-202ENST00000427494 CT45A10P0DMU9 189 aa10.81□□□□□ -0.68
APOBEC3D-202ENST00000427494 ARL6IP6Q8N6S5 226 aa10.81□□□□□ -0.68
APOBEC3D-202ENST00000427494 METTL26Q96S19 204 aa10.81□□□□□ -0.68
APOBEC3D-202ENST00000427494 IGHV3OR16-13A0A075B7E8 117 aa10.81□□□□□ -0.68
APOBEC3D-202ENST00000427494 IGHV3-74A0A0B4J1X5 117 aa10.81□□□□□ -0.68
APOBEC3D-202ENST00000427494 CRIP1P50238 77 aa10.81□□□□□ -0.68
APOBEC3D-202ENST00000427494 RCHY1Q96PM5 261 aa10.81□□□□□ -0.68
APOBEC3D-202ENST00000427494 ATP6V0BQ99437 205 aa10.81□□□□□ -0.68
APOBEC3D-202ENST00000427494 MYO18BQ8IUG5 2567 aa10.8□□□□□ -0.68
APOBEC3D-202ENST00000427494 A0A096LNT2 108 aa10.8□□□□□ -0.68
APOBEC3D-202ENST00000427494 IGHV3-49A0A0A0MS15 119 aa10.8□□□□□ -0.68
APOBEC3D-202ENST00000427494 ZNF705FA8MVS1 300 aaPredicted RBP10.8□□□□□ -0.68
APOBEC3D-202ENST00000427494 APOHP02749 345 aaPredicted RBP10.8□□□□□ -0.68
APOBEC3D-202ENST00000427494 ARL3P36405 182 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms