RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 ATP6V0E1O15342 81 aa7.79□□□□□ -1.16
LINC00494-201ENST00000416742 IGHV4-39P01824 125 aa7.79□□□□□ -1.16
LINC00494-201ENST00000416742 CTSGP08311 255 aa7.79□□□□□ -1.16
LINC00494-201ENST00000416742 PIP4P2Q8N4L2 257 aa7.79□□□□□ -1.16
LINC00494-201ENST00000416742 ZC2HC1AQ96GY0 325 aa7.79□□□□□ -1.16
LINC00494-201ENST00000416742 PAM16Q9Y3D7 125 aa7.79□□□□□ -1.16
LINC00494-201ENST00000416742 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.79□□□□□ -1.16
LINC00494-201ENST00000416742 NPFFO15130 113 aa7.78□□□□□ -1.16
LINC00494-201ENST00000416742 HSBP1O75506 76 aa7.78□□□□□ -1.16
LINC00494-201ENST00000416742 CSN1S1P47710 185 aa7.78□□□□□ -1.16
LINC00494-201ENST00000416742 RNASEKQ6P5S7 137 aaKnown RBP7.78□□□□□ -1.16
LINC00494-201ENST00000416742 TMEM219Q86XT9 240 aa7.78□□□□□ -1.16
LINC00494-201ENST00000416742 MAP1AP78559 2803 aaPredicted RBP7.78□□□□□ -1.16
LINC00494-201ENST00000416742 CHEK1O14757 476 aa7.78□□□□□ -1.16
LINC00494-201ENST00000416742 MRPS12O15235 138 aaKnown RBP7.78□□□□□ -1.16
LINC00494-201ENST00000416742 ZNF324O75467 553 aaPredicted RBP7.78□□□□□ -1.16
LINC00494-201ENST00000416742 SCGB2A1O75556 95 aa7.78□□□□□ -1.16
LINC00494-201ENST00000416742 C15orf32Q32M92 178 aa7.78□□□□□ -1.16
LINC00494-201ENST00000416742 RBPMS2Q6ZRY4 209 aaKnown RBP7.78□□□□□ -1.16
LINC00494-201ENST00000416742 RABAC1Q9UI14 185 aa7.78□□□□□ -1.16
LINC00494-201ENST00000416742 LINC00527Q9UJ94 153 aa7.78□□□□□ -1.16
LINC00494-201ENST00000416742 IGHV3OR16-13A0A075B7E8 117 aa7.78□□□□□ -1.16
LINC00494-201ENST00000416742 TMSB15BA0A087X1C1 80 aa7.78□□□□□ -1.16
LINC00494-201ENST00000416742 IGHV3-74A0A0B4J1X5 117 aa7.78□□□□□ -1.16
LINC00494-201ENST00000416742 DIRC3C9JPN6 131 aa7.78□□□□□ -1.16
LINC00494-201ENST00000416742 CLEC3BP05452 202 aa7.78□□□□□ -1.16
LINC00494-201ENST00000416742 RHOGP84095 191 aa7.78□□□□□ -1.16
LINC00494-201ENST00000416742 PSG3Q16557 428 aa7.78□□□□□ -1.16
LINC00494-201ENST00000416742 ALKBH7Q9BT30 221 aaPredicted RBP7.78□□□□□ -1.16
LINC00494-201ENST00000416742 IGHV3-66A0A0C4DH42 116 aa7.77□□□□□ -1.17
LINC00494-201ENST00000416742 C1orf194Q5T5A4 169 aa7.77□□□□□ -1.17
LINC00494-201ENST00000416742 BRD3OSQ6XYD6 125 aa7.77□□□□□ -1.17
LINC00494-201ENST00000416742 ATP5L2Q7Z4Y8 100 aa7.77□□□□□ -1.17
LINC00494-201ENST00000416742 LYPD1Q8N2G4 141 aa7.77□□□□□ -1.17
LINC00494-201ENST00000416742 BORCS7Q96B45 105 aa7.77□□□□□ -1.17
LINC00494-201ENST00000416742 AJUBAQ96IF1 538 aa7.77□□□□□ -1.17
LINC00494-201ENST00000416742 NDUFAF3Q9BU61 184 aa7.77□□□□□ -1.17
LINC00494-201ENST00000416742 COL12A1Q99715 3063 aa7.77□□□□□ -1.17
LINC00494-201ENST00000416742 ACACBO00763 2458 aa7.77□□□□□ -1.17
LINC00494-201ENST00000416742 IGKV2-40A0A087WW87 121 aaPredicted RBP7.77□□□□□ -1.17
LINC00494-201ENST00000416742 CENPVL3A0A0U1RRI6 287 aa7.77□□□□□ -1.17
LINC00494-201ENST00000416742 A0A1B0GXF2 115 aa7.77□□□□□ -1.17
LINC00494-201ENST00000416742 IGKV2D-40P01614 121 aaPredicted RBP7.77□□□□□ -1.17
LINC00494-201ENST00000416742 RPL7P18124 248 aaKnown RBP7.77□□□□□ -1.17
LINC00494-201ENST00000416742 ZNF705AQ6ZN79 300 aaPredicted RBP7.77□□□□□ -1.17
LINC00494-201ENST00000416742 C8orf49Q96NF6 230 aa7.77□□□□□ -1.17
LINC00494-201ENST00000416742 ZFP30Q9Y2G7 519 aa7.77□□□□□ -1.17
LINC00494-201ENST00000416742 M0QZ24 198 aa7.77□□□□□ -1.17
LINC00494-201ENST00000416742 CT45A10P0DMU9 189 aa7.77□□□□□ -1.17
LINC00494-201ENST00000416742 CT83Q5H943 113 aa7.77□□□□□ -1.17
LINC00494-201ENST00000416742 CLEC19AQ6UXS0 136 aa7.77□□□□□ -1.17
LINC00494-201ENST00000416742 TMEM75Q8N9X5 138 aa7.77□□□□□ -1.17
LINC00494-201ENST00000416742 VAMP8Q9BV40 100 aa7.77□□□□□ -1.17
LINC00494-201ENST00000416742 IGHV3-49A0A0A0MS15 119 aa7.76□□□□□ -1.17
LINC00494-201ENST00000416742 HLA-DMBP28068 263 aa7.76□□□□□ -1.17
LINC00494-201ENST00000416742 FAM110DQ8TAY7 271 aaPredicted RBP7.76□□□□□ -1.17
LINC00494-201ENST00000416742 ZNF48Q96MX3 618 aaPredicted RBP7.76□□□□□ -1.17
LINC00494-201ENST00000416742 ZNF785A8K8V0 405 aa7.76□□□□□ -1.17
LINC00494-201ENST00000416742 M0R2Z0 102 aa7.76□□□□□ -1.17
LINC00494-201ENST00000416742 OVOL3O00110 214 aa7.76□□□□□ -1.17
LINC00494-201ENST00000416742 NIT1Q86X76 327 aa7.76□□□□□ -1.17
LINC00494-201ENST00000416742 OR4B1Q8NGF8 309 aa7.76□□□□□ -1.17
LINC00494-201ENST00000416742 CACNA1AO00555 2505 aa7.76□□□□□ -1.17
LINC00494-201ENST00000416742 A0A1B0GV90 55 aa7.75□□□□□ -1.17
LINC00494-201ENST00000416742 ZNF207O43670 478 aaKnown RBP7.75□□□□□ -1.17
LINC00494-201ENST00000416742 C3orf79P0CE67 100 aa7.75□□□□□ -1.17
LINC00494-201ENST00000416742 CRIP1P50238 77 aa7.75□□□□□ -1.17
LINC00494-201ENST00000416742 IGHV4-61A0A0C4DH41 118 aa7.75□□□□□ -1.17
LINC00494-201ENST00000416742 PAX1P15863 534 aa7.75□□□□□ -1.17
LINC00494-201ENST00000416742 PSG9Q00887 426 aa7.75□□□□□ -1.17
LINC00494-201ENST00000416742 CCL19Q99731 98 aa7.75□□□□□ -1.17
LINC00494-201ENST00000416742 TRAV40A0A0B4J280 105 aa7.75□□□□□ -1.17
LINC00494-201ENST00000416742 TMEM238LA0A1B0GVL6 79 aa7.75□□□□□ -1.17
LINC00494-201ENST00000416742 NPIPB6E9PJ23 425 aa7.75□□□□□ -1.17
LINC00494-201ENST00000416742 ARMS2P0C7Q2 107 aa7.75□□□□□ -1.17
LINC00494-201ENST00000416742 RELQ04864 619 aaPredicted RBP7.75□□□□□ -1.17
LINC00494-201ENST00000416742 PDE6HQ13956 83 aa7.75□□□□□ -1.17
LINC00494-201ENST00000416742 LY6EQ16553 131 aa7.75□□□□□ -1.17
LINC00494-201ENST00000416742 GFRA4Q9GZZ7 299 aa7.75□□□□□ -1.17
LINC00494-201ENST00000416742 TIMM8BQ9Y5J9 83 aaPredicted RBP7.75□□□□□ -1.17
LINC00494-201ENST00000416742 CSN3P07498 182 aa7.74□□□□□ -1.17
LINC00494-201ENST00000416742 ATP5J2P56134 94 aa7.74□□□□□ -1.17
LINC00494-201ENST00000416742 PMCHL1Q16048 86 aa7.74□□□□□ -1.17
LINC00494-201ENST00000416742 TEX43Q6ZNM6 134 aa7.74□□□□□ -1.17
LINC00494-201ENST00000416742 Q8TAT8 98 aa7.74□□□□□ -1.17
LINC00494-201ENST00000416742 ZNF502Q8TBZ5 544 aa7.74□□□□□ -1.17
LINC00494-201ENST00000416742 PIMREGQ9BSJ6 248 aa7.74□□□□□ -1.17
LINC00494-201ENST00000416742 SOX21Q9Y651 276 aaPredicted RBP7.74□□□□□ -1.17
LINC00494-201ENST00000416742 SMAD5-AS1Q9Y6J3 95 aa7.74□□□□□ -1.17
LINC00494-201ENST00000416742 MUC21A0A0G2JKD1 596 aa7.74□□□□□ -1.17
LINC00494-201ENST00000416742 MUC21A0A140T8X8 626 aa7.74□□□□□ -1.17
LINC00494-201ENST00000416742 A0A1B0GUT8 65 aa7.74□□□□□ -1.17
LINC00494-201ENST00000416742 GOSR1O95249 250 aa7.74□□□□□ -1.17
LINC00494-201ENST00000416742 MUC21Q5SSG8 566 aa7.74□□□□□ -1.17
LINC00494-201ENST00000416742 ATOH7Q8N100 152 aa7.74□□□□□ -1.17
LINC00494-201ENST00000416742 TXN2Q99757 166 aa7.74□□□□□ -1.17
LINC00494-201ENST00000416742 CSPG4Q6UVK1 2322 aa7.74□□□□□ -1.17
LINC00494-201ENST00000416742 LCN12Q6JVE5 192 aa7.74□□□□□ -1.17
LINC00494-201ENST00000416742 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.73□□□□□ -1.17
LINC00494-201ENST00000416742 KIR2DL5BA0A0G2JN68 375 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 320.2 ms