RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 TRBV24-1A0A075B6N3 115 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 TRGV2A0A075B6R0 118 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 TRAV9-2A0A087WT02 112 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 NDUFS7O75251 213 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 GUSBP1Q15486 140 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 TTC9CQ8N5M4 171 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 C8orf46Q8TAG6 207 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 UBE2E2Q96LR5 201 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 E7EQL1 145 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 H3BUX3 64 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 ARMS2P0C7Q2 107 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 TSKUQ8WUA8 353 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 BPESC1Q9GZL8 116 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 CFAP54Q96N23 3096 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 TRAV26-2A0A0B4J265 109 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 SRRM4A7MD48 611 aaKnown RBP4.05□□□□□ -1.76
LTN1-202ENST00000389194 NEGR1Q7Z3B1 354 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 DTX1Q86Y01 620 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 TMEM75Q8N9X5 138 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 IFI27L1Q96BM0 104 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 RNASE2P10153 161 aaKnown RBP4.05□□□□□ -1.76
LTN1-202ENST00000389194 GRNP28799 593 aaKnown RBP4.05□□□□□ -1.76
LTN1-202ENST00000389194 SMAGPQ0VAQ4 97 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 ZNF124Q15973 351 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 GNB1LQ9BYB4 327 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 WT1P19544 449 aaPredicted RBP4.04□□□□□ -1.76
LTN1-202ENST00000389194 ACTL10Q5JWF8 245 aa4.04□□□□□ -1.76
LTN1-202ENST00000389194 PHLDA1Q8WV24 401 aaPredicted RBP4.04□□□□□ -1.76
LTN1-202ENST00000389194 SPTBN4Q9H254 2564 aa4.04□□□□□ -1.76
LTN1-202ENST00000389194 E9PQ18 207 aa4.04□□□□□ -1.76
LTN1-202ENST00000389194 COX6CP09669 75 aa4.04□□□□□ -1.76
LTN1-202ENST00000389194 PAX8Q06710 450 aa4.04□□□□□ -1.76
LTN1-202ENST00000389194 BEND2Q8NDZ0 799 aa4.04□□□□□ -1.76
LTN1-202ENST00000389194 CYSLTR1Q9Y271 337 aa4.04□□□□□ -1.76
LTN1-202ENST00000389194 SIGLEC9Q9Y336 463 aa4.04□□□□□ -1.76
LTN1-202ENST00000389194 SH2D1AO60880 128 aa4.04□□□□□ -1.76
LTN1-202ENST00000389194 HBDP02042 147 aa4.04□□□□□ -1.76
LTN1-202ENST00000389194 SLC25A48Q6ZT89 311 aaKnown RBP4.04□□□□□ -1.76
LTN1-202ENST00000389194 ZNF625Q96I27 306 aaPredicted RBP4.04□□□□□ -1.76
LTN1-202ENST00000389194 ZNF815PA8K554 130 aa4.04□□□□□ -1.76
LTN1-202ENST00000389194 C17orf77Q96MU5 243 aa4.04□□□□□ -1.76
LTN1-202ENST00000389194 YAE1D1Q9NRH1 226 aa4.04□□□□□ -1.76
LTN1-202ENST00000389194 BUB1B-PAK6H3BSN5 160 aa4.04□□□□□ -1.76
LTN1-202ENST00000389194 RPL35AP18077 110 aaKnown RBP4.04□□□□□ -1.76
LTN1-202ENST00000389194 HLA-DMBP28068 263 aa4.04□□□□□ -1.76
LTN1-202ENST00000389194 POLR3KQ9Y2Y1 108 aaPredicted RBP4.04□□□□□ -1.76
LTN1-202ENST00000389194 ZNF106Q9H2Y7 1883 aaKnown RBP4.04□□□□□ -1.76
LTN1-202ENST00000389194 CHD8Q9HCK8 2581 aa4.04□□□□□ -1.76
LTN1-202ENST00000389194 TSPAN13O95857 204 aa4.04□□□□□ -1.76
LTN1-202ENST00000389194 CFHR3Q02985 330 aa4.04□□□□□ -1.76
LTN1-202ENST00000389194 SLAQ13239 276 aa4.04□□□□□ -1.76
LTN1-202ENST00000389194 TTC32Q5I0X7 151 aa4.04□□□□□ -1.76
LTN1-202ENST00000389194 SIGLEC15Q6ZMC9 328 aa4.04□□□□□ -1.76
LTN1-202ENST00000389194 FGF23Q9GZV9 251 aaPredicted RBP4.04□□□□□ -1.76
LTN1-202ENST00000389194 PLA2G2EQ9NZK7 142 aa4.04□□□□□ -1.76
LTN1-202ENST00000389194 TMEM8BA6NDV4 472 aa4.03□□□□□ -1.76
LTN1-202ENST00000389194 K7EMI3 77 aa4.03□□□□□ -1.76
LTN1-202ENST00000389194 RNF166Q96A37 237 aaPredicted RBP4.03□□□□□ -1.76
LTN1-202ENST00000389194 IGHV3-16A0A0C4DH30 117 aa4.03□□□□□ -1.76
LTN1-202ENST00000389194 ZC2HC1AQ96GY0 325 aa4.03□□□□□ -1.76
LTN1-202ENST00000389194 HCFC1P51610 2035 aa4.03□□□□□ -1.76
LTN1-202ENST00000389194 ALPK3Q96L96 1907 aa4.03□□□□□ -1.76
LTN1-202ENST00000389194 GGTLC3B5MD39 225 aa4.03□□□□□ -1.76
LTN1-202ENST00000389194 TNFSF13O75888 250 aa4.03□□□□□ -1.76
LTN1-202ENST00000389194 SAA4P35542 130 aa4.03□□□□□ -1.76
LTN1-202ENST00000389194 MOB4Q9Y3A3 225 aa4.03□□□□□ -1.76
LTN1-202ENST00000389194 NCKAP5O14513 1909 aa4.03□□□□□ -1.76
LTN1-202ENST00000389194 DKK1O94907 266 aa4.03□□□□□ -1.76
LTN1-202ENST00000389194 TPTE2P1Q5T6R2 138 aa4.03□□□□□ -1.76
LTN1-202ENST00000389194 UNQ6494/PRO21346Q6UXR6 183 aa4.03□□□□□ -1.76
LTN1-202ENST00000389194 BCL6BQ8N143 479 aaPredicted RBP4.03□□□□□ -1.76
LTN1-202ENST00000389194 NEU4Q8WWR8 484 aaPredicted RBP4.03□□□□□ -1.76
LTN1-202ENST00000389194 RCHY1Q96PM5 261 aa4.03□□□□□ -1.76
LTN1-202ENST00000389194 VCX2Q9H322 139 aa4.03□□□□□ -1.76
LTN1-202ENST00000389194 TRAV8-2A0A0B4J237 113 aa4.03□□□□□ -1.76
LTN1-202ENST00000389194 TMEM158Q8WZ71 300 aa4.03□□□□□ -1.76
LTN1-202ENST00000389194 TRAV12-2A0A075B6T6 113 aa4.03□□□□□ -1.77
LTN1-202ENST00000389194 TRAV41A0A0B4J266 112 aa4.03□□□□□ -1.77
LTN1-202ENST00000389194 ST20Q9HBF5 79 aa4.03□□□□□ -1.77
LTN1-202ENST00000389194 CHTOPQ9Y3Y2 248 aaKnown RBP4.03□□□□□ -1.77
LTN1-202ENST00000389194 A0A1B0GWJ7 208 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 ATP5LO75964 103 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 LYL1P12980 280 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 PRTN3P24158 256 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 NUTF2P61970 127 aaKnown RBP4.02□□□□□ -1.77
LTN1-202ENST00000389194 C5orf64Q2M2E5 130 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 IL17RELQ6ZVW7 336 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 PIEZO1Q92508 2521 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 TRAV1-1A0A0B4J248 108 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 OVOL3O00110 214 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 DPM2O94777 84 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 IGKCP01834 107 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 NPSP0C0P6 89 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 WT1-ASQ06250 92 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 CIRBPQ14011 172 aaKnown RBP4.02□□□□□ -1.77
LTN1-202ENST00000389194 VWC2Q2TAL6 325 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 OR4X2Q8NGF9 303 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 SNHG12Q9BXW3 62 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 NPFFR1Q9GZQ6 430 aa4.02□□□□□ -1.77
LTN1-202ENST00000389194 C17orf58Q2M2W7 97 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms