RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 ERVK11-1P61568 191 aa9.88□□□□□ -0.83
SMARCA4-217ENST00000591595 CNEP1R1Q8N9A8 125 aa9.88□□□□□ -0.83
SMARCA4-217ENST00000591595 RPEQ96AT9 228 aa9.88□□□□□ -0.83
SMARCA4-217ENST00000591595 KLF13Q9Y2Y9 288 aaPredicted RBP9.88□□□□□ -0.83
SMARCA4-217ENST00000591595 C16orf97H3BN30 126 aa9.87□□□□□ -0.83
SMARCA4-217ENST00000591595 TIMM8AO60220 97 aaPredicted RBP9.87□□□□□ -0.83
SMARCA4-217ENST00000591595 ZNF688P0C7X2 276 aa9.87□□□□□ -0.83
SMARCA4-217ENST00000591595 MYOD1P15172 320 aa9.87□□□□□ -0.83
SMARCA4-217ENST00000591595 MRPL23Q16540 153 aaKnown RBP9.87□□□□□ -0.83
SMARCA4-217ENST00000591595 MBNL2Q5VZF2 373 aaKnown RBP9.87□□□□□ -0.83
SMARCA4-217ENST00000591595 ZNF474Q6S9Z5 364 aaPredicted RBP9.87□□□□□ -0.83
SMARCA4-217ENST00000591595 CARD19Q96LW7 228 aa9.87□□□□□ -0.83
SMARCA4-217ENST00000591595 DCTN5Q9BTE1 182 aa9.87□□□□□ -0.83
SMARCA4-217ENST00000591595 CHAC1Q9BUX1 264 aa9.87□□□□□ -0.83
SMARCA4-217ENST00000591595 SPRY4Q9C004 299 aa9.87□□□□□ -0.83
SMARCA4-217ENST00000591595 TRAV4A0A0B4J268 109 aa9.87□□□□□ -0.83
SMARCA4-217ENST00000591595 LINC00473A8K010 186 aa9.87□□□□□ -0.83
SMARCA4-217ENST00000591595 PRRG2O14669 202 aa9.87□□□□□ -0.83
SMARCA4-217ENST00000591595 SP1P08047 785 aa9.87□□□□□ -0.83
SMARCA4-217ENST00000591595 TMUB1Q9BVT8 246 aa9.87□□□□□ -0.83
SMARCA4-217ENST00000591595 NBEAQ8NFP9 2946 aa9.87□□□□□ -0.83
SMARCA4-217ENST00000591595 ICE1Q9Y2F5 2266 aa9.86□□□□□ -0.83
SMARCA4-217ENST00000591595 TRGV5A0A0B4J1U4 118 aa9.86□□□□□ -0.83
SMARCA4-217ENST00000591595 NPIPB6E9PJ23 425 aa9.86□□□□□ -0.83
SMARCA4-217ENST00000591595 SPINT2O43291 252 aa9.86□□□□□ -0.83
SMARCA4-217ENST00000591595 IGLV2-8P01709 118 aa9.86□□□□□ -0.83
SMARCA4-217ENST00000591595 MPV17P39210 176 aa9.86□□□□□ -0.83
SMARCA4-217ENST00000591595 VKORC1L1Q8N0U8 176 aa9.86□□□□□ -0.83
SMARCA4-217ENST00000591595 KLF14Q8TD94 323 aaPredicted RBP9.86□□□□□ -0.83
SMARCA4-217ENST00000591595 RASL10AQ92737 203 aa9.86□□□□□ -0.83
SMARCA4-217ENST00000591595 HIGD1CA8MV81 97 aa9.86□□□□□ -0.83
SMARCA4-217ENST00000591595 PRR30Q53SZ7 412 aaPredicted RBP9.86□□□□□ -0.83
SMARCA4-217ENST00000591595 OR13A1Q8NGR1 328 aa9.86□□□□□ -0.83
SMARCA4-217ENST00000591595 SSMEM1Q8WWF3 244 aa9.86□□□□□ -0.83
SMARCA4-217ENST00000591595 FBXL15Q9H469 300 aa9.86□□□□□ -0.83
SMARCA4-217ENST00000591595 F8WDY8 70 aa9.86□□□□□ -0.83
SMARCA4-217ENST00000591595 AREGP15514 252 aa9.86□□□□□ -0.83
SMARCA4-217ENST00000591595 OR8A1Q8NGG7 326 aa9.86□□□□□ -0.83
SMARCA4-217ENST00000591595 LSM4Q9Y4Z0 139 aaKnown RBP9.86□□□□□ -0.83
SMARCA4-217ENST00000591595 ERVK-16P61578 105 aa9.85□□□□□ -0.83
SMARCA4-217ENST00000591595 RRN3P1Q2M238 152 aa9.85□□□□□ -0.83
SMARCA4-217ENST00000591595 MIC13Q5XKP0 118 aa9.85□□□□□ -0.83
SMARCA4-217ENST00000591595 ATP5L2Q7Z4Y8 100 aa9.85□□□□□ -0.83
SMARCA4-217ENST00000591595 PPP1R27Q86WC6 154 aa9.85□□□□□ -0.83
SMARCA4-217ENST00000591595 CEND1Q8N111 149 aa9.85□□□□□ -0.83
SMARCA4-217ENST00000591595 PIP4P2Q8N4L2 257 aa9.85□□□□□ -0.83
SMARCA4-217ENST00000591595 COQ2Q96H96 371 aa9.85□□□□□ -0.83
SMARCA4-217ENST00000591595 HIGD1BQ9P298 99 aa9.85□□□□□ -0.83
SMARCA4-217ENST00000591595 METRNQ9UJH8 293 aa9.85□□□□□ -0.83
SMARCA4-217ENST00000591595 WDR83OSQ9Y284 106 aa9.85□□□□□ -0.83
SMARCA4-217ENST00000591595 MGST3O14880 152 aa9.85□□□□□ -0.83
SMARCA4-217ENST00000591595 FAM106CPP0CH98 169 aa9.85□□□□□ -0.83
SMARCA4-217ENST00000591595 FAM106AQ4KMX7 169 aa9.85□□□□□ -0.83
SMARCA4-217ENST00000591595 TEN1Q86WV5 123 aa9.85□□□□□ -0.83
SMARCA4-217ENST00000591595 BRWD1-AS2P59051 145 aa9.84□□□□□ -0.83
SMARCA4-217ENST00000591595 HBBP68871 147 aa9.84□□□□□ -0.83
SMARCA4-217ENST00000591595 MDFICQ9P1T7 246 aa9.84□□□□□ -0.83
SMARCA4-217ENST00000591595 A0A1B0GXF2 115 aa9.84□□□□□ -0.83
SMARCA4-217ENST00000591595 C15orf62A8K5M9 175 aa9.84□□□□□ -0.83
SMARCA4-217ENST00000591595 C12orf74Q32Q52 190 aa9.84□□□□□ -0.83
SMARCA4-217ENST00000591595 ABHD12Q8N2K0 398 aa9.84□□□□□ -0.83
SMARCA4-217ENST00000591595 SNRNP40Q96DI7 357 aaKnown RBP9.84□□□□□ -0.83
SMARCA4-217ENST00000591595 LINC01587Q99440 93 aa9.84□□□□□ -0.83
SMARCA4-217ENST00000591595 LTAP01374 205 aa9.84□□□□□ -0.83
SMARCA4-217ENST00000591595 ACP1P24666 158 aa9.84□□□□□ -0.83
SMARCA4-217ENST00000591595 OR13C6PQ8NH95 151 aa9.84□□□□□ -0.83
SMARCA4-217ENST00000591595 RASL11BQ9BPW5 248 aa9.84□□□□□ -0.83
SMARCA4-217ENST00000591595 AP5S1Q9NUS5 200 aa9.84□□□□□ -0.83
SMARCA4-217ENST00000591595 C9JAW5 83 aa9.83□□□□□ -0.84
SMARCA4-217ENST00000591595 IGHV1-2P23083 117 aa9.83□□□□□ -0.84
SMARCA4-217ENST00000591595 ATP1A1-AS1Q5TC04 95 aa9.83□□□□□ -0.84
SMARCA4-217ENST00000591595 Q6Q795 121 aa9.83□□□□□ -0.84
SMARCA4-217ENST00000591595 LINC00479Q96M42 142 aa9.83□□□□□ -0.84
SMARCA4-217ENST00000591595 HIGD1AQ9Y241 93 aa9.83□□□□□ -0.84
SMARCA4-217ENST00000591595 TANC2Q9HCD6 1990 aa9.83□□□□□ -0.84
SMARCA4-217ENST00000591595 IQCF6A8MYZ5 107 aa9.83□□□□□ -0.84
SMARCA4-217ENST00000591595 J3KT08 172 aa9.83□□□□□ -0.84
SMARCA4-217ENST00000591595 CRLF1O75462 422 aa9.83□□□□□ -0.84
SMARCA4-217ENST00000591595 COL8A1P27658 744 aa9.83□□□□□ -0.84
SMARCA4-217ENST00000591595 CACNG7P62955 275 aa9.83□□□□□ -0.84
SMARCA4-217ENST00000591595 FOXF2Q12947 444 aa9.83□□□□□ -0.84
SMARCA4-217ENST00000591595 LGALS9BQ3B8N2 356 aa9.83□□□□□ -0.84
SMARCA4-217ENST00000591595 LGALS9CQ6DKI2 356 aa9.83□□□□□ -0.84
SMARCA4-217ENST00000591595 MRPL32Q9BYC8 188 aaKnown RBP9.83□□□□□ -0.84
SMARCA4-217ENST00000591595 SPRR3Q9UBC9 169 aa9.83□□□□□ -0.84
SMARCA4-217ENST00000591595 KLF12Q9Y4X4 402 aa9.83□□□□□ -0.84
SMARCA4-217ENST00000591595 P0C879 139 aa9.83□□□□□ -0.84
SMARCA4-217ENST00000591595 CADP27708 2225 aa9.83□□□□□ -0.84
SMARCA4-217ENST00000591595 CXXC4Q9H2H0 198 aa9.83□□□□□ -0.84
SMARCA4-217ENST00000591595 TNFRSF6BO95407 300 aa9.82□□□□□ -0.84
SMARCA4-217ENST00000591595 DLX4Q92988 240 aaPredicted RBP9.82□□□□□ -0.84
SMARCA4-217ENST00000591595 IGF2BP2-AS1Q96M15 143 aa9.82□□□□□ -0.84
SMARCA4-217ENST00000591595 MUC3AQ02505 3323 aa9.82□□□□□ -0.84
SMARCA4-217ENST00000591595 COL6A3P12111 3177 aa9.82□□□□□ -0.84
SMARCA4-217ENST00000591595 TREML4Q6UXN2 200 aa9.82□□□□□ -0.84
SMARCA4-217ENST00000591595 LRRC75A-AS1Q8N1F1 130 aa9.82□□□□□ -0.84
SMARCA4-217ENST00000591595 SGK494Q96LW2 274 aa9.82□□□□□ -0.84
SMARCA4-217ENST00000591595 ARRDC1-AS1Q9H2J1 176 aa9.82□□□□□ -0.84
SMARCA4-217ENST00000591595 ACTL6BO94805 426 aa9.81□□□□□ -0.84
SMARCA4-217ENST00000591595 RPL39P5Q59GN2 51 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms